Tigriopus californicus (tidepool copepod): 131880825
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Entry
131880825 CDS
T09700
Name
(RefSeq) transient receptor potential cation channel subfamily A member 1 homolog
Organism
tcf
Tigriopus californicus (tidepool copepod)
Motif
Pfam:
Ank_2
Ank
Ank_4
Ank_3
Ank_5
Ion_trans
MazG-like
DUF5798
VWA_3_C
Motif
Other DBs
NCBI-GeneID:
131880825
NCBI-ProteinID:
XP_059083518
LinkDB
All DBs
Position
5:12706301..12714042
Genome browser
AA seq
1355 aa
AA seq
DB search
MPNSGKVGPDPEVTLEIDSGPIGGRKSSEIGDLGDAFNFLFMGSNQDGLELLEGVSEADT
IPLESLVEDKQDHLQVQNDVPPKAKRSKQRKKSVITYNSSRRPSLVDGILEGDLFNFQDQ
EAVATDKSLYQLSREGDYRTIANILQKIQYRNSNKLHRIVNQLDKNKISALHYAARYDHL
DIVKLLVGYGANVNNKGDDGLTPLHFCARFKLVDRSALPTPHFPETVKDFNQFTEKIVGH
AIDDELKAKVENSVIYYLVMKGAHINEKDKYGLTPLHYAAMRGNDEATIELIKCTNQIDI
ECKDEQRLTPLHLACTYGQANTAKILLEHGANILSIGEKYQSALHKAAAIGNLELVEMLT
AVAKATLNETDIEQAKKNRVYFDLLLQMLKDEDNDNNTPLLLAVESGSVDITRHLLDFGA
NVNHFNKARVYPLHLACTIGSLEIVKLLLHRQATINCINSSYQTPLLVASAYNHVGIIEY
LLKKGAKIEKRDRDNFTPLLLAGAEGNAEAVEVLLKHGANIYAQDREDKSILYWAAAQNH
YQAIEVLLKDKRSRKLLDACDRYDNSPLHASARKGYLDIVIALLEAGGDVDNKNEDEQTP
LHLAAAEGRTRICKEILKRDKFAVNDEDSDSNTALHLASIHGHSKVVAALIESGADIEAR
NYYLWTPLDCAAAYGQPKCAKLLLDANAPIDPMDKNKTTPLHLAARSGHEKTVKLLIERG
ASLVQTNSEGHNALTMAILHGKKDVTSVIIDSKNWIEAMKSDYISLVTGVRETPLRLLIK
QFPDLAKRVFDRCMITNLQSESQQVEKEQFATVSGDDPRFTITFNYELLDDAYGLLEDNE
DDLVSFKLDNGELAHQIRESEWINNEIWDENHRLLPEAQPYSKSSTILKLNHPLMIMVKE
KRTSLLGHPLCMALVRHKWNSFGRYVYYLTLSLYLLFVVFLTDFIINTPAPYSASDLFER
KGPGSNYNRSMILKILNDNYNGGFGSEAACIALRDEVKIERRSLALVGKIVILALAAFHI
LKEMFQLAQVRLLDSSFTWARLTYIGVENVLEWACYITAILFVWDFTSCHQETGLRYDWQ
WQVGAFSITMTWLNLLSNVRKFPFLGIYVVMFTDVLQTFLKFSIICALFIIAFSLGFHAL
LIEQENFGNVWVAMMKTTVMMIGEFEFDDLFFDNISNSDENKEHMVLPYREATFLFFLVF
MIIMSIIVMNLLVGLAVDDIKAVQDNAVLQRLAMQVTLNLDVEKILPEFIRRRFIVRQEV
VLPNQNKSIFAKIFHDDNTLKRIAFTVVAKGNEDKMDRLSSRVEDINQKLKTVKEANKEI
RSEVGQMIAVLLSMAKQLGTNTEELENETMPSSPL
NT seq
4068 nt
NT seq
+upstream
nt +downstream
nt
atgccgaatagtggtaaagtaggcccagacccagaagtgaccctagaaatcgactctggt
cccattggaggtcgcaaaagtagcgagattggagatctgggtgacgctttcaatttctta
ttcatgggttccaatcaggatggtttggaactcctggaaggagtgtccgaggctgataca
attcctttggaatcattagttgaggataagcaggaccaccttcaagtgcagaatgatgtt
ccacccaaagctaagcgatccaaacaacgaaaaaagagcgtgattacctataattccagc
cgaagaccaagtcttgtagatgggatcctggaaggcgatcttttcaatttccaagaccaa
gaggcggttgctactgacaagtctctgtatcagctctctagggaaggtgactatcggacc
attgccaatatccttcagaagatccaataccggaattccaacaagcttcacagaatagtg
aatcagttggataagaataagatatctgcccttcattatgccgcacgttacgaccacttg
gacattgttaagcttttggtgggttatggagctaatgttaacaacaaaggagatgatgga
ctcacacccttgcatttttgcgccaggttcaaacttgtggacaggagtgctcttcctaca
cctcattttccagaaactgtcaaggatttcaatcaatttacagagaagattgttgggcat
gcaatagatgacgaattgaaggccaaggttgagaactcagtcatctattacctggtcatg
aaaggagcacatattaacgagaaagacaaatatggcttgactccgttacattatgctgct
atgcgaggcaatgatgaggccaccatagagctcatcaagtgcaccaaccaaattgacatt
gagtgtaaggacgaacaacgcctcactcctcttcacttagcttgcacttatggtcaggca
aatacggctaagatcctcttggaacatggggcaaacattcttagtattggggagaagtat
cagtcagctttgcacaaggccgctgccattggcaaccttgaattggttgaaatgcttaca
gctgtggccaaagccacactgaatgaaaccgacatcgaacaggcaaagaaaaacagggtt
tattttgatctattgttgcagatgctcaaagatgaagacaatgataacaatacccctttg
cttttggccgtcgaaagtggatcagtggatattacgaggcaccttctagactttggagcc
aatgtcaaccattttaacaaggctcgagtgtaccctctgcatttggcgtgtactattggt
agtttagaaatagtcaaattgcttctccatcgacaggcaactattaattgtatcaacagt
agctaccaaacgcccttactcgttgcatcagcttacaaccacgtgggcattatagagtac
ttgttgaaaaagggcgcgaaaattgaaaaacgagaccgggacaacttcacgcctttgtta
ttggcaggggctgagggtaatgccgaagctgtagaagttctcttgaagcatggtgctaac
atttatgctcaagatagagaagacaaaagtattctgtattgggcagcggcacaaaatcat
taccaggccattgaggtgttgttgaaagacaaaagatctcggaagctcttagatgcatgt
gaccgttatgataattccccattgcatgccagtgctaggaaaggctacttggacatcgtt
atcgctctattggaggctggtggggatgtcgacaacaaaaatgaggacgaacaaacccct
ttacatttggcagccgctgagggtcgaacccggatttgcaaggagatcctgaagcgtgac
aaattcgcggtcaatgacgaggactccgattcgaacactgcattgcatctggcctcaatc
catgggcattccaaagtggtggctgccctcattgaatccggagctgatattgaagcccga
aattattatctatggacacccttggattgtgccgcagcatatgggcaaccaaaatgtgcc
aaacttcttctcgatgccaatgctcccattgatccgatggacaaaaacaagaccacgcct
ctgcatttagccgcccgatcgggtcacgagaagaccgttaaattactcatcgaaagggga
gcttcccttgttcaaacgaacagtgaaggtcataacgcccttaccatggccattctccac
ggaaaaaaggatgtgaccagcgtgattatcgacagcaagaactggatcgaggccatgaag
agcgattacatttccttagtgacaggagtccgggaaacgccgttgagattgcttatcaag
caatttccggatctagccaaacgtgtctttgaccgctgtatgattaccaacctccaatcc
gaatctcaacaagttgagaaagagcaatttgccactgtgtccggagatgatccaagattc
actatcaccttcaactatgaactcctagatgatgcttatggccttttggaagataacgag
gatgatctcgtgtcctttaagctggacaacggcgagcttgctcaccaaatccgggagtct
gagtggatcaacaatgagatctgggatgagaaccatcggcttctcccagaagctcaaccg
tactcgaaatcatctactatccttaagttaaaccacccactgatgatcatggtgaaagag
aagcgaaccagtcttttgggacacccattgtgcatggcattggtccgtcataagtggaac
agttttgggcgctatgtctattacctcactctgagcttgtacttgctctttgttgtattc
ctcacggacttcatcatcaacacacccgctccctacagtgcctctgatctttttgagcgt
aaaggtcctggttccaattataacagatccatgatcctgaaaatcctgaacgataactac
aatgggggatttggttcagaagctgcgtgcatcgcccttagagatgaagtcaagatcgaa
agaaggtcattggctttggtgggaaaaatagtgatcttggcattggcagctttccatatt
ttgaaggaaatgttccaattggcccaggtccgattattggactcttcattcacgtgggct
cggttgacctacattggagtggagaacgtgcttgaatgggcttgctatatcacagccatt
ttatttgtttgggacttcacgagctgccaccaggaaacgggtctacgatacgattggcaa
tggcaagtgggtgccttttccattacaatgacttggttaaacttgttgtccaatgtgagg
aaatttcctttcctcgggatatacgtggtcatgttcacggacgtgcttcagaccttcctt
aagttctccatcatttgcgctttgttcattatcgccttctctttaggcttccacgccctt
ttgatcgaacaggagaactttggaaacgtatgggtggccatgatgaagaccaccgtcatg
atgattggtgaatttgagtttgatgatctcttcttcgacaatattagtaattctgacgag
aacaaggaacatatggtacttccctaccgtgaggccacatttctcttcttcttggtgttc
atgatcatcatgtcgatcatcgtcatgaacctattggtgggtttggccgttgacgatatc
aaagccgttcaagacaatgcggttcttcaaaggctggccatgcaagtgaccttaaatctg
gatgttgagaaaatcctccctgagttcattcgaagacgcttcattgtccgccaagaagta
gtgttgccgaaccagaataaatcaatatttgccaaaatctttcatgatgacaacaccctc
aagcggatagccttcacagtcgtggccaaaggaaatgaggacaaaatggatcgattgtcc
agtcgtgtggaagacatcaatcagaaattaaaaaccgtcaaggaggccaataaggaaatt
cgctcagaggtcggtcaaatgatcgctgtccttctatctatggccaagcaacttggcaca
aatactgaggaattggaaaacgaaaccatgccatcttcaccgttatga
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