Tigriopus californicus (tidepool copepod): 131883843
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Entry
131883843 CDS
T09700
Name
(RefSeq) chromobox protein homolog 1-like
KO
K11586
chromobox protein 3
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
131883843
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tcf03041
]
131883843
03036 Chromosome and associated proteins [BR:
tcf03036
]
131883843
Spliceosome [BR:
tcf03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
131883843
Chromosome and associated proteins [BR:
tcf03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
131883843
Heterochromatin formation proteins
HP1 (heterochromatin protein 1)
131883843
BRITE hierarchy
Motif
Pfam:
Chromo_shadow
Chromo
Mtf2_C
Motif
Other DBs
NCBI-GeneID:
131883843
NCBI-ProteinID:
XP_059087420
LinkDB
All DBs
Position
7:4824750..4826198
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AA seq
169 aa
AA seq
DB search
MPRDPDTAEEEEEEYQVEKVVDKRVAKNGKIEYLLKWKGYGEEDNTWEPRENLDCEDLIE
NFEKVRREKAGKRKDEKRKSTSGPASEAKKKKGDDDRPRGFDRGLDPERIIGATDSSGEL
MFLIKWKGSDEADLVPARDANVKCPQTVIKFYEERLTWHTSSQDDDNDD
NT seq
510 nt
NT seq
+upstream
nt +downstream
nt
atgccccgtgatcccgatactgccgaagaggaggaggaggagtaccaggtcgagaaggtg
gtcgacaaacgggtggccaagaacggcaaaattgaatatcttctcaaatggaaaggatac
ggtgaagaagacaacacctgggagccccgtgagaatcttgattgtgaagatctgattgag
aattttgaaaaagtgcgccgtgagaaggccggaaagcgcaaggacgagaaacgcaaatcc
acctccggcccagcttccgaagccaaaaagaagaagggcgatgatgaccgcccacgaggc
tttgatcggggtctagatcccgagcgaatcatcggtgccaccgactctagtggcgagctc
atgttcttgattaagtggaagggtagcgacgaggccgacttggtacctgcccgagatgct
aacgtcaaatgcccccaaaccgtcatcaagttctacgaggaacgtctgacatggcacacg
tcgagccaagacgacgacaatgacgactga
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