Tigriopus californicus (tidepool copepod): 131885787
Help
Entry
131885787 CDS
T09700
Name
(RefSeq) glycosyltransferase 25 family member-like isoform X1
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf00310
Lysine degradation
tcf00514
Other types of O-glycan biosynthesis
tcf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
131885787
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
131885787
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
tcf01003
]
131885787
Enzymes [BR:
tcf01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
131885787
Glycosyltransferases [BR:
tcf01003
]
O-Glycan biosynthesis
O-linked Gal type
131885787
BRITE hierarchy
Motif
Pfam:
Glyco_transf_25
Anp1
Motif
Other DBs
NCBI-GeneID:
131885787
NCBI-ProteinID:
XP_059089931
LinkDB
All DBs
Position
8:complement(15439471..15448583)
Genome browser
AA seq
566 aa
AA seq
DB search
MIPQIALLFLMWHSQTILADEDDVLPTITIVMLARNKAHVLPFSLELLQDLDYPKNRMAL
FIRSDHNQDETVDVLHTWLDSVQDQYYAVNFTSLSGTPTFPGSLGPNHWTDDRFSHLIQL
KQEGMKYARSIWSDFVWFLDADVLLTHNQMLRELIPMGETQVISAPMLKTLTRYSNFWAG
MSDTYYYARTDEYDPILGRTSLGCHSVPMVHTSVLVNLNKVESLKLTFLPEDIPNYDGPR
DDIIVFALSAQFNGVPMYICNNHNYGYTMVPLADEDVLEKDFEMLSDLRLQIIADIGPLE
PHPDLAGYVLQPPLKNRLDVDHIYMINLKRRSDRKAKMEACFQLLGIDYEYFEAVDGRDL
NEDYLEDHGIRMLDEFQDPLHGRPLTYGEIGCFMSHYHIWKDIIKHGYQRTIVFEDDIRF
EPNFRESFQNLLLELSGLDLKWDLIYLGRKILHNVEEPWLEHSNLLVTNGYTYWTLAYMI
TLKGAQKLVDEQPLGKMVPVDEYLPIMFDKHPNNTWSHHFKIRDLRAFSVHPRFVHPTHY
TGEEGYFSDTEATSTIAAKADQKQEL
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgatcccacaaatcgcgctcctttttctcatgtggcattctcaaaccatcctcgctgat
gaagacgatgtattacctacaattaccatagtcatgctggccagaaataaggcccatgtt
ttaccattctccttggaactacttcaagatctagattatccaaagaatcgaatggctttg
tttatccggagcgaccataatcaagatgagaccgtggacgtgcttcacacttggttagat
tcggttcaagaccaatactatgcggtcaacttcacatctttgtcggggactccgactttt
ccaggatctttgggtccaaatcattggacagacgatcgtttttcacatctcatccaattg
aagcaggagggtatgaagtatgcccggtccatctggtccgatttcgtttggtttctcgat
gcagacgtgctcttgacccacaatcagatgctgcgtgagctcattcctatgggcgaaacc
caagtgatatcggctccaatgctcaaaactcttactcggtattcgaacttttgggctggt
atgtcagatacgtactactacgcccggacagacgaatacgatcccattttgggacgaaca
tctttgggatgtcatagtgtgcctatggtgcatacctcggttctagtcaatttgaataaa
gtggaatccctcaaacttaccttcttgcctgaggatattcccaactacgacggtccacga
gatgacatcatagtgtttgctctcagcgcccaattcaacggcgttcccatgtacatttgc
aacaaccacaactatggctacaccatggttcccttagccgatgaggatgttctggagaag
gattttgaaatgttgagcgatctccgtcttcaaataatagccgatattggccctttggaa
cctcatcctgatttagccgggtacgtgcttcaaccgccattaaagaatagactcgacgtc
gatcacatttacatgatcaacttaaagcgccgctctgatcgaaaagccaaaatggaagca
tgctttcagcttctgggcattgattacgagtactttgaggctgtggatggacgagatttg
aacgaagactacctcgaagatcatggcataagaatgttggacgaatttcaggaccctctc
cacgggcgaccattaacttacggcgagatcggatgcttcatgagtcactatcacatctgg
aaggacatcattaagcacggctaccaaaggaccatcgtatttgaggatgacatcaggttc
gagccgaacttcagggagagcttccagaacctacttctagagctatctggacttgatttg
aagtgggatcttatttacctaggtcgaaagatcctccacaatgttgaagaaccatggtta
gagcattccaacttgttggtaaccaacggctacacctattggacccttgcctacatgatc
acccttaaaggcgctcagaaactagtcgatgagcagcctttgggcaagatggttccggtg
gatgaatatttgcctatcatgttcgacaagcatccaaacaacacttggagtcatcatttc
aaaattagagatctcagagcattcagtgtccacccacgcttcgttcacccaactcattac
acaggcgaagagggttacttcagtgacaccgaagccacctcaacaattgcggccaaagcg
gatcaaaaacaggaactctga
DBGET
integrated database retrieval system
