Thermomonas carbonis: H9L16_05420
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Entry
H9L16_05420 CDS
T06786
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
tcn
Thermomonas carbonis
Pathway
tcn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tcn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
H9L16_05420 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tcn03400
]
H9L16_05420 (recD)
Enzymes [BR:
tcn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
H9L16_05420 (recD)
DNA repair and recombination proteins [BR:
tcn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
H9L16_05420 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
AAA_11
Viral_helicase1
UvrD-helicase
Helicase_RecD
AAA_22
SH3_13
UvrD_C
AAA_16
SLFN-g3_helicase
DEAD
T2SSE
RecD_N
nSTAND3
AAA_28
Herpes_Helicase
DUF6481
SRP54
Rad17
TrwB_AAD_bind
NTPase_1
ATPase
Motif
Other DBs
NCBI-ProteinID:
QNN71017
UniProt:
A0A7G9ST42
LinkDB
All DBs
Position
1171874..1173700
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AA seq
608 aa
AA seq
DB search
MSLLRALQQAGVLRTLDDALANTMRRLDPDTPDDVLAAAALASLAVAQGHAGFDPASPRQ
LVDADIAWPDAEAWRQQLAASRFVATPASPIDEAQTAPLVLDNGLLYLRRYREYERRLAM
QLRRIASAPNPEIGIEPIALLFATLFPDAHSGDHQARAAALALRRALLLVTGGPGTGKTT
TIARLLTLRVAQASRAGTTPPRIALAAPTGRAAERMAESLRRAVAQMAEQGIGAALLEAL
PAQASTLHRLLGTVPDSPRFRHNKDNPLPFDIVVVDEASMVDLPLMCKLTEAVADGAQLV
LLGDPDQLPSVEAGDVLAAILGAAGAGDALSMGDAAALHPLLGDVPVDAGTNHLVGHRVH
LQHGWRQSEALHLAPLAEAVRNGDALEALSLLRGGTLSNVHFHEGVDDPLQARPDLLAHF
RTLATHTDPAQALRQGNRLRLLTALREGPSGARGLNARIEVALSGRRIGTPPAWFPGRLL
LITENSYRHGLFNGDVGICLADADGTPLAWFSGEGSDHVRAFHPAALPAHESAFAMTVHK
AQGSEFDEVWLQLPRADSRVLSRELLYTGLTRARSALHVAGTADVIAAALARHAGRVSGL
GWRLGATE
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgctgcgcgccctgcaacaggccggcgtcttgcgcacgctggacgatgcactg
gccaacaccatgcgccgcctcgatccggacacgccggacgatgtgctggccgccgccgcg
ttggcctcgctcgctgtcgcgcagggacatgccggcttcgatcctgcatcgccgcggcaa
ctggtcgatgccgatatcgcctggcccgatgccgaggcatggcggcagcaactcgccgca
tcgcgcttcgtcgccacgccggcatcgccgatcgatgaagcgcagaccgcgccgctcgtc
ctcgacaacggcttgttgtatttgcgccgctatcgcgaatacgaacgtcggttggcgatg
caactccggcgcatcgcatcggcgccgaatccggagatcggaatcgaaccgatcgcgctg
ttgttcgcgacactgttcccggacgcacatagcggcgaccaccaggcccgcgccgccgcc
ctcgccctgcgccgcgcgttgctgctggtcaccggcggtcccggcaccggcaagaccacc
acgattgctcgattgctcaccctgcgcgttgcgcaggcgagccgagccggcaccacgccg
ccgcggatcgcgctggccgcgcccaccggccgcgccgccgaacgcatggcggaaagcctg
cgtcgcgccgtcgcgcagatggccgaacagggcatcggcgccgccttgctcgaagcgctg
cccgcgcaggccagcaccctgcatcgcctgctcggcaccgttccggactcgccgcgcttt
cgccacaacaaagacaacccgctgccgttcgacatcgtggtggtcgacgaagcctcgatg
gtcgacttgccgctgatgtgcaagctcaccgaagcggtggccgacggcgcgcaactggtc
ttgctgggcgaccccgaccagttgccctcggtcgaagccggcgatgtgctggccgcgatc
ctcggtgccgccggtgccggcgatgcgttgtcgatgggcgatgcggccgcgttgcatcca
ttgctcggcgacgtgccggtcgatgcgggtacgaaccacctggtgggccatcgcgtccac
ctccaacacggctggcgccaaagcgaagccttgcacctcgcgccactcgccgaggccgtg
cgcaacggcgatgccttggaagcgctctcgttgctgcgcggcggcacgctctccaatgtg
catttccacgaaggcgtggacgatccgctgcaggcgcggccggatctgctcgcgcacttc
cgcacgctggccacgcacaccgatcccgcgcaggcgctgcggcagggcaatcggctgcgc
ctgctcaccgcgctgcgcgaaggcccgtcaggcgcgcgcggcctcaacgcccgcatcgaa
gtcgcactctccggccgccgcatcggcaccccgcccgcgtggttccccggccgcctgctg
ctgatcaccgagaacagctatcgccacggcctgttcaacggcgacgtcggcatctgcctg
gccgatgccgacggcacgccgctggcctggttctcgggcgaaggcagcgaccacgtgcgc
gccttccatcccgccgcgttgcccgcgcacgaatccgccttcgccatgaccgtgcacaag
gcgcagggcagcgagttcgacgaagtgtggttgcagctgccgcgcgccgacagccgcgtg
ctcagccgcgagctgctctacaccggcctgacccgcgcgcgttccgcattgcatgtcgca
ggaactgcggatgtgatcgccgccgcgctggcgcgccatgcggggcgggtgtcggggttg
ggctggcggttgggcgctacggaatga
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