Pseudoduganella chitinolytica: PX653_00815
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Entry
PX653_00815 CDS
T08857
Name
(GenBank) ATP-dependent DNA ligase
Organism
tct
Pseudoduganella chitinolytica
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Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DNA_ligase_A_C
RNA_ligase
Motif
Other DBs
NCBI-ProteinID:
WEF33367
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Position
187587..189239
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AA seq
550 aa
AA seq
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MREFARLYAELDETTATNRKLDALQAYFSSAAPENAAWAVYFLAGGKPRQAVPVKLLRQY
ATEYAGLDDWLFDECYDAVGDLAETIAHILPEPKTRSDVGLAEWIEQRIAPLRGAAPETI
RQALFDYWDELETRERFLLMKLIGGGFRVGVSKLLVTRALSAIAAVDSKLIAQRLMGWTD
GSVRPTAQGFLQLIAAQSDQEHAMRGGQPYPFFLAHQLQAAPATLGELKDWQVEWKYDGM
RAQIVARGGENWVWSRGEDLITERFPELAAIRLPEGTVVDGEILVWQAGENDTGNPSPFA
DLQKRIGRKTLSAKLLAELPAALVAYDLLELDGVDLRQLPQCERRTLLEQLVERVDNPRL
RISPLVHADSWDDLARIRDESRARGVEGMMIKAASAQYGVGRTKDVGTWWKWKIDPYSVD
AVLIYAQAGHGRRASLYTDYTFAVWDSDGNGGRQLVPFAKAYSGLTDAEIAQVDNAVRRT
TVEKFGPVRSVRPTMVFEIGFEGIAASHRHKSGIAVRFPRILRRREDKSVEEADTLDMLK
GLLAQASLAA
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgaattcgcccgcctgtacgcggaactggacgagaccacggcgaccaaccgcaag
ctcgatgcgctgcaggcgtacttttccagcgcggcgccggagaacgcggcgtgggcggtc
tacttcctcgcgggcggcaagccgcgccaggccgtgcccgtcaagctgctgcgccagtac
gccaccgaatacgcgggactggacgactggctgttcgatgagtgctatgacgccgtgggc
gacctggccgaaaccatcgcgcacatcctgccggagccgaagacgcgcagcgacgtgggg
ctggccgagtggatcgaacagcgcatcgcgccgctgcgcggcgccgcgccggaaacgatc
cggcaggcgctgttcgactactgggacgagctggaaacgcgcgagcgcttcctgctgatg
aagctgatcggcggcggctttcgtgtcggtgtctcgaagctccttgtcacgcgcgcgctg
tccgccatcgcggcggtggattcgaagctgatcgcacagcggctgatgggctggacggac
ggcagcgtgcggcccaccgcgcaaggcttcctgcagctgatcgccgcgcagtccgaccag
gagcatgcgatgcggggcggccagccgtatccgttcttcctggcgcaccagctgcaggcc
gcgccggccacgctgggcgagctgaaggactggcaggtggaatggaagtacgacgggatg
cgcgcgcagatcgtcgcgcgcggcggcgaaaactgggtgtggtcgcgcggggaagacctg
atcacggaacgcttccccgagctggccgcgatccggctgccggaaggcacggtggtcgat
ggcgagatcctggtctggcaggcgggcgagaacgataccggcaacccgtcgccgtttgcc
gacctgcagaagcgcatcggccgcaagacgctgtcggcgaaactgctggccgagctgccg
gccgcgctggtggcctatgacctgctggagctggacggtgtcgacctgcgccagttgccc
cagtgcgagcgccgcaccctgctggaacaattggtcgagcgggtggacaatccgcgcctg
cgcatctcgccgctggtgcatgccgacagctgggacgacctggcgcgcatccgcgacgag
tcacgcgcccgcggcgtcgagggcatgatgatcaaggcggccagcgcccagtatggcgtg
ggccgcaccaaggacgtgggcacgtggtggaagtggaagatcgacccgtacagcgtggat
gcggtactgatctacgcccaggccgggcacggccgacgcgcttcgctgtacaccgactac
acgttcgcggtatgggacagcgacggcaacggcgggcgccagctggtgccgttcgcgaag
gcctactcgggcctgaccgatgccgagatcgcccaggtggacaatgcggtgcgccgcacg
acggtcgagaagttcggcccggtgcgcagcgtgcggccgacgatggtgttcgagatcggc
ttcgaggggatcgccgcctcgcaccgccacaagtccggcatcgccgtgcgctttccccgc
atcctgcgccggcgcgaggacaagagcgtggaggaagccgatacgctggacatgctgaaa
ggcctgctggcgcaggccagcctggccgcatga
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