Thiomicrospira cyclica: Thicy_0053
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Entry
Thicy_0053 CDS
T01517
Name
(GenBank) isocitrate dehydrogenase, NADP-dependent
KO
K00031
isocitrate dehydrogenase [EC:
1.1.1.42
]
Organism
tcy
Thiomicrospira cyclica
Pathway
tcy00020
Citrate cycle (TCA cycle)
tcy00480
Glutathione metabolism
tcy01100
Metabolic pathways
tcy01110
Biosynthesis of secondary metabolites
tcy01120
Microbial metabolism in diverse environments
tcy01200
Carbon metabolism
tcy01210
2-Oxocarboxylic acid metabolism
tcy01230
Biosynthesis of amino acids
Module
tcy_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
tcy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
Thicy_0053
09106 Metabolism of other amino acids
00480 Glutathione metabolism
Thicy_0053
Enzymes [BR:
tcy01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.42 isocitrate dehydrogenase (NADP+)
Thicy_0053
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Gene cluster
GFIT
Motif
Pfam:
IDH
Motif
Other DBs
NCBI-ProteinID:
AEG30829
UniProt:
F6DB89
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All DBs
Position
55644..57893
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AA seq
749 aa
AA seq
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MTQSSTLIYTHTDEAPALATYSFLPIIQAFTAAAGVEVTTRDISLAGRILANFNEYLTAE
QQTVDALTELGELAKKPAANIIKLPNISASIPQLTGAIAELQAQGYAIPNYPATPQNDQE
RDIKARYAKVLGSAVNPVLREGNSDRRVAGPVKAYAKAHPHSMGVWSKDSKSHVAHMQAD
DFYGSELSYVSPTEDSVRIEFHGEDGQITVLKAKTRLQAGEVIDASVMRVAALRAFLAEQ
VADAKAQGVLFSLHLKATMMKVSDPIMFGHAVEVYFAQVFERFSDTFSKLGVSTRNGLGD
VYQKIQALPAAERVEIDQALADAMAQGPALAMVDSDKGISNLHVPSDVIIDASMPAAIRS
SGQMWNAQGQLQDMKAIIPDRCYAGVYQQTIEFCKANGAFDPATMGTVPNVGLMAQKAEE
YGSHDKTFEMPSAGSVQVINEAGVVIFAHQVAKGDIWRMCQTKDIAIQDWVKLAVTRARL
TNTPAIFWLDAQRPHDANLIKKVENALGMLDIEGLDLEILSPVDATAKTLARAKAGMDTI
SVTGNVLRDYLTDLFPILELGTSAKMLSIVPLLAGGGLFETGAGGSAPKHVQQLVQENFL
RWDSLGEFLALAVSLEHLAQQTKNSRINVLVDSLNQATSRFLQENRSPGRKVGELDNRGS
HVYLATHWAQALAEQQVDLSLHQQFAPLAEALQAQLDAILAELAAVQGQPVDLGGYYHPD
AKKAAAAMRPSKLFNAALAQFAQGVSHGA
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atgacccaatcgtctactctaatctatacgcatactgatgaagcgcccgctttagctacc
tattcatttcttcctattattcaagcctttacagcggctgctggagtggaagtgactact
cgtgacatttctttggctggccgcattttggcgaattttaacgaatatctaaccgctgaa
cagcaaaccgttgatgctttaaccgaacttggtgagttggcgaaaaagcccgcagccaat
attattaagctgccgaatatttcagcctcaattccgcagttgaccggtgctattgctgag
ctacaagcccagggttatgcaattccaaactatcccgctactcctcagaatgatcaagag
cgcgatataaaagcccgttatgcaaaggtgttgggttctgccgtgaatcccgtattgcgt
gagggtaattcggaccgtcgtgttgcaggacctgttaaagcttatgccaaagctcatccg
catagcatgggggtttggtcaaaagactctaaatctcatgtagcgcatatgcaagccgat
gacttttatggttcagagctctcttatgtttcgcctaccgaggattcggttcgcattgaa
tttcatggtgaagatggacaaattacagtattaaaagcaaaaacccgcttgcaagcaggt
gaggtgattgatgcctcggtcatgcgtgtcgcagctttgcgggcattcttggccgaacaa
gtcgccgacgccaaggcacaaggtgtgttgttttcattgcatctaaaagccaccatgatg
aaagtatccgacccgattatgtttggtcatgctgttgaagtctattttgcgcaggtattt
gaacgcttttccgataccttcagcaaattgggagtatctacccgcaatggcttaggcgat
gtgtatcaaaaaattcaagcactgccggccgctgaacgagttgagattgatcaagcttta
gccgatgcgatggcgcaaggacccgctttggcgatggttgactctgataaaggtattagc
aatttacatgtacccagtgatgtgattattgatgcatcaatgcccgcagcgattcgcagt
tctgggcaaatgtggaatgcacaaggtcagctccaagatatgaaagcgattattccggac
cgctgttatgccggggtttatcaacaaaccattgagttttgtaaggctaatggcgccttt
gatccagcgactatgggtacggtacctaacgtcggtttaatggctcaaaaggccgaagaa
tatggttcgcacgataaaacctttgagatgccgagcgccggttcggtgcaagtcattaac
gaagccggtgtggtgatttttgcgcatcaagtagccaaaggcgatatctggcgcatgtgc
caaaccaaagatattgccattcaagattgggtgaaattagccgtaacacgagcacgttta
accaatacccctgctattttttggctcgatgcgcaacgtccgcatgatgctaacttgatt
aaaaaggtcgaaaatgccctaggtatgttggatattgaaggcctggatttagaaatctta
agcccggtcgatgccaccgccaaaacgctcgcacgggccaaggccggcatggatactatt
tcggttaccggcaacgtgctgcgtgattacttaaccgatctgttcccgattttagagctt
ggcactagtgcgaagatgctatctattgtgcccttgctggctggtggcggattatttgaa
accggcgccggcggttcagcacccaagcatgtgcagcaactggtgcaagaaaactttttg
cgctgggattctttaggtgagttcctggccttggcggtgtcactcgagcacctagcgcaa
caaaccaaaaactctcgtattaatgtgttggtggatagcttaaatcaagcaaccagccgt
ttcttgcaggaaaaccgctcacccgggcgcaaggtgggtgagttagataatcgcggcagt
catgtgtatttggcgacccattgggcacaagccttggccgagcagcaggtagatttaagc
ttgcaccagcagtttgcaccgctggctgaagcgttgcaggctcagttagacgctattctg
gccgaattagccgcggtacaaggtcagccggtagatttgggtggctattatcatccagac
gccaaaaaagccgctgccgctatgcgtccgagtaaattatttaacgccgcattggcacag
tttgcccaaggagtgagtcatggcgcttaa
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