Thiomicrospira cyclica: Thicy_0198
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Entry
Thicy_0198 CDS
T01517
Name
(GenBank) cysteine desulfurase, SufS subfamily
KO
K11717
cysteine desulfurase / selenocysteine lyase [EC:
2.8.1.7
4.4.1.16
]
Organism
tcy
Thiomicrospira cyclica
Pathway
tcy00450
Selenocompound metabolism
tcy01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tcy00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
Thicy_0198
Enzymes [BR:
tcy01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.7 cysteine desulfurase
Thicy_0198
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.16 selenocysteine lyase
Thicy_0198
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GFIT
Motif
Pfam:
Aminotran_5
Aminotran_1_2
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
AEG30974
UniProt:
F6D9L7
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Position
193374..194591
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AA seq
405 aa
AA seq
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MIDNQAIRAEFPLLSQTEKDLPLVYLDNASTSQKPQQVIDAVAKYYASENANVHRGVYGL
SERATEAFEGVRGQVQRLLNANTTKEVIFVRGATEGINLVASSWGRSSLKPGDQIIVSEM
EHHSNLVPWQLLVADLGIEIVKWPIDARGQLHLEDLAGLLNDKTRLVAVTHMSNALGSIN
PINEIITMAHQQGAKVLVDAAQSISHMPIDVQALDVDFLVFSGHKMYAPTGIGVLYAKQA
LLEQMPPYMGGGDMIYQVSFEATTFNELPYKFEAGTPNIAGVIGLGSAISFIERVGFDTI
AKIENDLLDYATARLSAIPGLRIIGEADHKGAVISFVFDQAHPHDIATLIDQDAIALRAS
HHCAMPVMLKFNLPATLRASFGVYNNRDDVDRLCAALVDALDMLA
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgatcgacaatcaagccattcgcgcggaattccccttgctgtcgcaaaccgaaaaggat
ttgccgttggtgtacttagataacgcctctacaagtcaaaaaccacagcaggtcattgat
gcggtggccaagtattatgcgagtgaaaatgcaaatgttcaccgaggcgtttacggctta
agtgaacgcgcgaccgaagcatttgagggcgtcagggggcaggttcagcgcttattaaat
gccaatactactaaagaagtgatttttgttcgcggtgccaccgaaggcattaacttggtt
gccagttcatggggtcgcagcagcttaaagccgggcgatcaaatcattgttagtgagatg
gagcatcactccaacctagtaccttggcaactgctcgttgctgacttgggtattgaaatt
gtgaaatggccgattgatgcccgtggtcagttgcatttagaggatttagcaggcctgcta
aatgataaaactcgcttggttgcggtgactcatatgtctaatgcgctgggttctatcaac
ccgattaacgaaatcattacaatggcgcaccagcagggtgctaaggttttggtggatgcg
gcacagtcaatttcgcatatgccaattgatgtacaggcgctggatgttgatttcttggtt
ttttctggacataaaatgtatgcgccaaccggtattggcgtgctatatgccaagcaagcg
ttacttgaacaaatgcccccttacatgggcggtggcgatatgatttatcaagtgagtttt
gaagccactacgtttaatgagttgccctataagtttgaggcaggtacgcccaatattgcc
ggtgttataggtttaggttcggccatatcctttattgagcgggtcggttttgacacgatt
gctaagattgaaaatgacctactagattatgcaacggcgcgactgtcagcgataccaggc
ctgcgcatcattggtgaggcggatcacaagggtgcggttatttcgtttgtgtttgatcaa
gcgcatcctcatgatattgcgaccttgatcgatcaagacgcgattgcactgcgggcaagc
catcactgcgccatgccggtcatgctgaagttcaacttgccagcgactttgcgggcatct
tttggggtttataataatcgtgatgatgtggatcgattgtgcgctgccttggtagatgca
ctcgatatgttggcgtga
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