Thiomicrospira cyclica: Thicy_0370
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Entry
Thicy_0370 CDS
T01517
Name
(GenBank) Diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
tcy
Thiomicrospira cyclica
Pathway
tcy00300
Lysine biosynthesis
tcy00470
D-Amino acid metabolism
tcy01100
Metabolic pathways
tcy01110
Biosynthesis of secondary metabolites
tcy01120
Microbial metabolism in diverse environments
tcy01230
Biosynthesis of amino acids
Module
tcy_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
tcy00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Thicy_0370
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Thicy_0370
Enzymes [BR:
tcy01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
Thicy_0370
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Pro_racemase
Motif
Other DBs
NCBI-ProteinID:
AEG31145
UniProt:
F6DAQ2
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All DBs
Position
511121..511996
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AA seq
291 aa
AA seq
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MSIGFSKMHGLGNDFMVVDAINQSIDLTPGLVKSLADRHWGVGFDQLLVVERPKSEVADF
RYRIFNADGSEVQQCGNGARCFARFVYDQGLTQKREIPVETASGLIVLYLEDDGQVRVNM
GLPRFAPNSLPFVAEAQAENYQIEVDNQAWLIGAVSMGNPHAVLMPFEDVTQAPVATLGA
ALESHPRFPERVNVAFPQLVSPQHIKLRVFERGAGETQACGTGACAAMAVLRRWGQVAEE
VTVSLPGGDLVIRWSGQLDEPLWMTGPVAQVFTGQLGAGWLSETKGVVHDE
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgagtataggatttagcaaaatgcatggtttgggcaatgactttatggtggtcgatgcc
attaatcagtcaattgacttgacaccaggcctggttaaaagccttgccgaccggcattgg
ggcgtggggtttgaccagttattagtggttgagcgacccaagtcagaggtagccgatttt
cgttaccgaatttttaatgccgatggttcagaagttcagcaatgcggtaatggcgcccgt
tgttttgcccgctttgtttatgaccaaggcttaacccaaaaacgtgaaatccccgttgaa
accgcttcggggctaatcgtgttgtatttggaagacgatggtcaagtgcgggtcaatatg
gggttgccgcgttttgcgccgaacagcttgccttttgtggccgaggcacaagccgagaat
taccagattgaggtcgacaaccaggcctggttaatcggcgcagtgtcgatgggcaatccc
cacgcggtattaatgccatttgaagatgttacccaagcgccggtggcaacgctgggtgcg
gcgttggaatcccatccacgctttccagagcgcgtgaatgtggcctttccacagttggtg
agtccacagcatattaagttgcgtgtgtttgagcgtggtgccggcgaaacccaggcatgt
ggtaccggtgcctgtgcggcgatggcggtattgcgccgttggggacaagtggctgaagaa
gtcactgtatctttacccggtggggatttagtgatccgttggtcaggtcagctggatgag
ccactttggatgacagggccggtagcacaggtgtttaccggccaattgggtgcgggttgg
ttgagcgaaacgaaaggggtcgtgcatgacgagtga
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