Teleopsis dalmanni (Malaysian stalk-eyed fly): 119670555
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Entry
119670555 CDS
T09311
Name
(RefSeq) histone deacetylase 6 isoform X1
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
tda
Teleopsis dalmanni (Malaysian stalk-eyed fly)
Brite
KEGG Orthology (KO) [BR:
tda00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tda01009
]
119670555
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tda03019
]
119670555
04131 Membrane trafficking [BR:
tda04131
]
119670555
03036 Chromosome and associated proteins [BR:
tda03036
]
119670555
Enzymes [BR:
tda01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
119670555
Protein phosphatases and associated proteins [BR:
tda01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
119670555
Messenger RNA biogenesis [BR:
tda03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
119670555
Membrane trafficking [BR:
tda04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
119670555
Chromosome and associated proteins [BR:
tda03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
119670555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
zf-UBP_var
PagP
Motif
Other DBs
NCBI-GeneID:
119670555
NCBI-ProteinID:
XP_037936782
LinkDB
All DBs
Position
1:complement(181659495..181678515)
Genome browser
AA seq
1073 aa
AA seq
DB search
MSSPIVTRRGAQKAKIQTRAMVKTFDTRKPNAALLEAKRRAKLLKMQEQSQQEIVVKDIF
QNAVNAKALVQKPTGLVYDESMSQHRCLWDSKHPECPERFIRVLERCKELDLVDRCKQIA
SRPASKDEIMLLHSEEHYKLLEKTSGVVDDEKMEDLSSQYDSIYIHPSTFELALLSVGST
IDLIENVVNGAVQNGMAIIRPPGHHAMKAEFNGYCFFNNVAIATQYALDVLKLNKIMIID
WDVHHGQGTQRFFYHDPRVLYFSIHRFEHGTYWPNLKESDFDAIGHGAGMGYNFNVPLNK
TGMGNGDYLAIFQQILVPVAMEYQPELIIISAGYDAALGCPEGEMEVTPACYAHLLNTLS
KLAQSRLAVILEGGYCLESLAEGAALTLRTLLGDPCPVLVEKLDPPSEIIQETILNCIYA
HRPYWRCLQAQSTYTVEELNNVNPQNNLHKISRVFVGGPPLPERFPTRGTAPVQKLEDIL
RIQQRLQWLKAETKLFTPKIKVCYVYDEMMMQHTNTFEQGHPEQPERIRKIYEMHMDFNL
IDRMTHMPSRHATTDEICLAHTRSHVNFIRRIGEKDELQTMGSKYNSVYFHPKTFECATL
AAGSVLSTVDKVLKGEARSGVCIVRPPGHHAESDVPHGFCIFNNVAIAAQYAIRDHGLKR
VLIVDWDVHHGNGTQHIFESNPKVLYMSVHRYDNASFFPKSKDADYDVVGKGAGIGFNVN
IPWNKKGMGDLEYVMAFQQIIMPIAYEFNPELVLISAGFDAAIGDPLGGCKVTPEAYGLF
THWLSALANGRLIICLEGGYNVNSISYAMTMCTKSLLGDPIPPVQFNGNITRPPTVAYLN
CVETLQNCINVQKRYWKCLQFNKKLPQCSGENNNEDFLAATMKNLDITTDDMQGAVGGLD
AIVMHETLEGSGIKPKVKDKTLTEFISENLEALENNECFAVVPLKTCPHCIRLRPEEAPK
RINTNTACKQCESTAENWICLTCFEVHCGRYVNEHMMQHSVSTDHPMVLSFSDLSVWCYP
CSAYIDNNQLFVYKNLAHRDKFNEDMVWCYHDRATDNENNDQLDIYLHIQENN
NT seq
3222 nt
NT seq
+upstream
nt +downstream
nt
atgagttctccgattgttacacgacgtggagcacaaaaggccaaaatacagacaagagca
atggtgaaaacattcgatacccgtaagccgaacgccgcacttctcgaagcgaaacggaga
gcaaaattattaaaaatgcaggaacaatcacagcaagaaattgttgtcaaagatattttt
caaaatgctgttaatgctaaagcattggtacaaaaacctactggattggtctatgatgag
tccatgtcacaacaccgctgcttatgggatagtaaacatccagagtgtccagaaaggttc
atacgcgtattggagcgatgcaaagaattggatttggttgatcgctgcaagcaaatagca
tcccgtcctgcttctaaagatgaaattatgctcttacacagtgaagaacattataaactg
ttggaaaaaacttccggcgtagtagatgacgagaaaatggaagatttaagctcacaatat
gactcaatttacattcatccgtccacattcgaattagcattactttcggttggctcaaca
attgatttaattgaaaacgtagtaaatggcgctgtacaaaatggtatggcaattatacga
cctcctggacatcatgcaatgaaagctgaatttaatggatattgttttttcaacaatgtt
gcaattgccacacaatatgccttagatgtgttgaaattaaataaaataatgataattgac
tgggatgtacatcatggtcagggaacacagagatttttctatcacgatccaagagtactt
tacttttcaatacatcgttttgaacatggtacatattggcctaacttaaaagagtctgat
tttgatgcaattgggcatggtgcaggtatgggttataactttaatgtaccattgaataaa
actggcatgggcaatggcgattatttggcaatttttcaacaaatattggtacctgttgca
atggaatatcaaccagaattgataattatatctgctggatatgatgctgcacttggttgt
ccggaaggtgaaatggaagtaacacctgcatgttatgcgcatcttttaaatacattatca
aaattggctcaatctcgtcttgctgtgatactggaaggtggatattgtcttgaatcctta
gctgaaggcgcagctttgactttgcgcactttacttggtgatccgtgtcctgttttagta
gaaaaattagatccaccttctgaaataatacaagaaacaattttaaattgcatttatgca
caccgtccgtattggaggtgtctgcaagcacagtcaacatatactgttgaagagcttaat
aatgtaaatccacaaaataatttacataaaataagtcgagtctttgtgggcggaccacct
ttgccggaacgttttcctacaagaggtactgcgccagtacaaaaacttgaagatatacta
cgaattcaacagcgactgcagtggcttaaagcagaaacaaagctttttacgccgaagata
aaagtgtgttacgtttatgatgaaatgatgatgcagcatacaaatacttttgagcaagga
catcctgaacaaccagagcgcattaggaagatatatgaaatgcatatggacttcaattta
attgatcgtatgacacatatgccatctcgccacgctacaaccgatgaaatttgccttgca
catacccgatcacatgttaatttcattcgacgtattggtgaaaaagatgaattgcaaacc
atgggttcaaaatacaattcagtatacttccatcctaaaacgtttgaatgtgccactttg
gcagctggttctgttctcagcactgttgacaaagtacttaaaggagaggctcgcagtggt
gtgtgcattgtacgcccacctggacatcatgctgagtcagatgtaccgcacggattttgc
atttttaataatgtagcaatagcagcgcaatacgcaataagggatcatggccttaaacgt
gtactcattgtagattgggatgtacatcatggtaatggcactcaacatatatttgaatca
aatcccaaagtgttgtatatgagcgtacatcgttatgacaatgcgtcgttctttccgaag
agtaaagatgctgattatgatgtagttggcaaaggtgcaggaataggcttcaatgtaaat
ataccttggaataagaaaggcatgggtgatttggaatatgttatggcttttcaacaaata
ataatgccaattgcttatgaatttaatcctgaattagtgctaatatccgctgggtttgat
gctgctattggtgatcctttaggtggttgtaaagtaacgccagaagcatatggacttttt
acgcattggttatcggcgttagcaaatggtcgtttaattatttgtcttgaaggtggctat
aatgtcaattctatatcatatgcaatgactatgtgtacaaaatcattacttggtgatcct
ataccacctgtgcaattcaatggcaatatcacccgtccaccaactgttgcttatttaaat
tgcgttgaaactttacaaaattgtataaacgttcaaaaacgttattggaaatgtctacaa
ttcaataaaaaattaccgcaatgttctggtgaaaacaacaatgaggattttcttgctgct
actatgaaaaatttagatatcacgacggatgatatgcaaggagctgttggtggcttagat
gcaatcgttatgcatgaaacacttgaaggaagtggtattaagccgaaggtaaaagataaa
actttaacagaatttattagcgagaatttagaggctttagagaataatgaatgttttgct
gtcgttccattaaaaacatgtccacattgtatacgattacgtcctgaggaagcgcctaaa
agaataaatacaaatacagcatgtaaacaatgtgaatcaactgccgagaactggatatgt
ttaacttgttttgaagtacattgcggtcgttatgtcaatgagcatatgatgcagcatagt
gtttctacagatcacccaatggttttaagttttagtgatttgtcagtttggtgctatcca
tgctcagcttatattgacaataatcaactttttgtatacaaaaatttagcgcatcgagat
aaatttaatgaagacatggtttggtgttaccatgatagagcgactgataatgaaaacaat
gaccaacttgacatttatttacatatccaagaaaataactga
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integrated database retrieval system
