Teleopsis dalmanni (Malaysian stalk-eyed fly): 119685498
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Entry
119685498 CDS
T09311
Name
(RefSeq) probable nucleoporin Nup54
KO
K14308
nuclear pore complex protein Nup54
Organism
tda
Teleopsis dalmanni (Malaysian stalk-eyed fly)
Pathway
tda03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tda00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
119685498
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tda03019
]
119685498
Messenger RNA biogenesis [BR:
tda03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
119685498
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Nup54
Nup54_C
Motif
Other DBs
NCBI-GeneID:
119685498
NCBI-ProteinID:
XP_037955724
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Position
2:14598684..14602230
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AA seq
613 aa
AA seq
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MSVFGGNTSLGASSTPVKPGMFSSFGATAAVAPTFGATATSTAAPPAFGTTSAFGTTTGF
GAPATSLAPTLGGFGTPAATSAPTLGGFGGFGTNTATTSVPTLGGFGGFGTNTAATSTAP
SLFGAASAAAGTSFGGFNTATSSAAPTFGGFGTSTTNTGFGGFGATATTSTAPTFSGFNT
QSQGFGGFNSTFGKPATSTVTPGFGGFGGNTSFMLGQPQPPVQQISPDEAFAQSIFNVAI
FGDERDTVIAKWNYLQALWGVGKTFYSQNAPPVDITSENYLCRFKAMGYSLLPGKENKFG
LVALNFNKPITEVKTQQNQLVATLNSILGNKPNLIVNIENISSIDEKKCQVVIYVEERSQ
ISPNETKRVLATDLNNYLNQQNVRAQVNNVGVIDLIALVQPDEDQLKEYLDTPPKGIDAR
VWRQAKLDNPDPAKFIPIPMIGFSSLKHRIKCQEAENERHALFLKKIENDFSVLRQRHAI
TTAKIMEHKRKLATLSHHILKVIVKQECTRKVGLPLTPEEEALRTKLENMQALVSAPTQF
KGRLSELLSQLRMQRNHYQHSMGEYTLDKDSAEDMKVFLAMQQKAIQTITETVVKDIKAL
QIIKDGLPELMRG
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtttttggcggcaatacatcgttaggcgctagtagcacaccggttaaacccgga
atgttttcatcttttggagcaactgctgctgtagcaccaacttttggagctacagctaca
tcaactgcggcaccacccgcatttgggacaacatcagcatttggcacgacgacaggtttc
ggagctcctgcaacgtctttagctcctacattaggtggttttggcacacctgccgcaaca
agcgctcccacattaggaggatttggtggttttggtacaaatacagcaacgacaagtgta
cctacattaggcgggtttggcggttttggtactaacactgcagcaacttctactgctccc
tcgctctttggtgcggcgtccgcagctgctggtacaagttttggaggtttcaatactgct
acctcaagtgcagcaccaacatttggaggttttggtactagtactacaaatactggtttt
ggtggatttggcgcaacagcaacgacatcgacagcaccaacatttagtggttttaacaca
caaagccaaggttttggaggatttaattctacctttggcaaaccagcaacaagtacggta
acccctggatttggcggctttggtggcaatactagttttatgctgggccaaccgcaacca
ccagtgcaacaaatttcaccagatgaagcatttgcacagtcgattttcaatgtcgctata
tttggagacgaacgggacacagtgatcgctaaatggaattatttacaggctctgtggggt
gttggtaaaacgttctactctcaaaatgctccacctgttgatataacgtcagaaaactat
ttatgtagattcaaagcaatgggatacagtcttttgcccggaaaggaaaataaattcggt
ttagtcgccttaaactttaacaaacctataactgaagtcaaaacacagcaaaatcaactt
gtagcaacactcaattcaatattaggcaataaacccaatttaattgttaatattgaaaat
ataagcagtattgatgaaaaaaagtgtcaagtagttatttacgtagaggagagatcgcaa
atatcgccaaacgaaaccaaacgtgtgctagcaactgatcttaataactacctaaatcaa
caaaacgtaagagcacaagtaaataatgttggtgttatagacttaatagcgctagtacaa
cctgatgaagatcaactaaaagaatatcttgataccccaccaaaaggaattgatgccaga
gtatggagacaagcgaaactagataatccggatccagcaaaattcatacccataccaatg
attggatttagctcgttaaaacatcgtataaaatgtcaagaagctgaaaatgagagacat
gccctatttttaaaaaaaattgaaaacgacttttctgtgttaagacagagacatgcgata
actacagcaaaaataatggaacataaacgtaaacttgccactttaagtcaccatatatta
aaagttattgttaaacaagaatgcacgcgtaaagtaggcttacctcttactcccgaagag
gaagcattgcgcacaaaattggaaaatatgcaagctctggtttcagccccaacacagttc
aaaggtcgtttaagtgaattactttctcagttgcgtatgcaaagaaatcattatcaacac
agtatgggtgagtacacactggacaaagatagtgcagaggatatgaaagtatttctagct
atgcagcagaaagctatacaaacaattactgaaacagttgtcaaggatatcaaagcgtta
caaattattaaggatggtttacctgaacttatgcgcggttaa
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