Triticum dicoccoides (wild emmer wheat): 119277140
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Entry
119277140 CDS
T07278
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 13-like isoform X1
KO
K11838
ubiquitin carboxyl-terminal hydrolase 7 [EC:
3.4.19.12
]
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
119277140
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tdc01002
]
119277140
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tdc04121
]
119277140
Enzymes [BR:
tdc01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
119277140
Peptidases and inhibitors [BR:
tdc01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
119277140
Ubiquitin system [BR:
tdc04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
119277140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP7_ICP0_bdg
UCH
USP7_C2
MATH
UCH_1
ubiquitin
RA
Motif
Other DBs
NCBI-GeneID:
119277140
NCBI-ProteinID:
XP_037414266
LinkDB
All DBs
Position
3B:complement(569230872..569251707)
Genome browser
AA seq
1104 aa
AA seq
DB search
MTMVTPRAPEPPPQDQDEEMLVPQQEVEVFEGPQPMEESMPAVDNESLPDASTSRFTWKI
ESISKHSGRKTHSDIFMVGGYSWRVLIFPTGNNVNHLSMYLDVADAKSLPIGWSRSAQFS
LAVINQLDSKHSVRKEVTHTFNSRESDWGFTSFMPLIDLYDPSKGYIVNDQCIIEAEVAV
RKIVDYWNYDSKNETGYVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTVDTPSGSIP
LALQSLFYRLQHGDNSISTKELTKSFGWDSYESFMQHDVQELNRVLCEKLEDKMKGTIVE
GTIQKLFEGHHMNYIECIGVDYKSTRKESFYDLALDVKGCLDVYASFDKYVAVEMLDGDN
KYQSEKYGLQDAKKGMLFIDFPPVLQLQLKRFEYDHARDIMVKINDRYEFPLQLDLDRDD
GKYLSPEADRSVRNLYTLHSVLVHSGGVSGGHYYAFIRPTLSNQWYKFDDERVTKEDLKR
ALEEQYGGEEELPHTNPGLNMNPLKFTKYSNAYMLVYIRESDKEKIVCDLEETDINEDLK
TRLRKEDEDKENKKKEKAEAHMFTTFKVARDHDLAAQIGRDMFFDLVDYEKIHPIRVLKD
MPFNQVKEEFSKEFGIPVHSQRFWWWSKRQNHTYRPTRPLTQQEESYTVGQLKDAAIRMN
SSELRLYLEVVQENHLTLASRTNDDILLFFKLYDPEKEELRYVGNLLLKASSTPSDIVPK
LNEIAGFQPDEDIELYEEIKFEPNIMCEPVDCDVSFSLNQIADGDILCYQKRCSLDQHRH
PNVSSFFEYVHNRQVVHFRLLEKPKQDDFSLELSKRSTYDDVVEKVAQHLGMDDPSKLRL
TQHIPHLQQPKHQYIKYRSIDHLSDMLLLRNPNQMSDILYYEILDIPLPELQGLITLRVA
FHQATPNEVLFHIIRLPKGSTYSDLIDDLKSRVQLSRSDAELRLFQVNNNKIWKVYQPTE
KIDAVHDPNVPLHVEEIPEVEKSAGPRDRLVHVVHFFKDNQHIQYYGVPFFFLIREGEAL
SDIKVRIQKKFEVPDEQFIKWKFAYVAYNRPDYLQDSDIVLSRFQQKNIYGPWEQSLGLE
HSDMPTKRANQNRHSFEKPVKIYN
NT seq
3315 nt
NT seq
+upstream
nt +downstream
nt
atgaccatggtgactcctcgcgcccccgagccgccgccgcaggaccaggacgaggagatg
cttgtgccacaacaggaagtggaggtcttcgaggggccgcagccgatggaagaatccatg
ccagctgttgacaatgaaagtttgcctgatgcatcaacttccagatttacatggaagatc
gaaagtatatccaagcacagtggtagaaaaacccactctgatatttttatggttgggggt
tacagctggcgagtgttgattttccccacaggaaacaatgtaaatcacctttcgatgtat
ctggatgttgctgatgccaagtctttacctattggctggagtaggagtgcccaatttagc
cttgctgtgatcaaccaattagacagcaagcactcagtaagaaaagaagtaacacataca
tttaattctcgagaaagtgattggggttttacatcctttatgcctttaattgatctatat
gatcctagtaaaggttatattgtgaacgatcaatgcatcattgaagctgaggttgctgtg
cgtaaaattgtggattactggaactacgactcaaaaaatgagactggttatgttggtctc
aagaatcaaggtgccacttgttacatgaattcgctgctccagacactctaccatattccc
tactttaggaaggctgtgtaccatatgcctactgtcgatacaccttcagggagcattcct
ttagctttgcaaagtcttttctacagacttcagcatggtgacaatagtatttccacaaaa
gagctgactaaatcttttggatgggattcctatgagtcgtttatgcagcatgatgtccaa
gagttaaatcgggttctatgtgaaaagctggaagataaaatgaagggaactattgtggaa
ggaacaatacaaaaattatttgaaggtcaccatatgaattatattgagtgcattggtgtt
gactacaaatctactagaaaagagtcattctatgatcttgcacttgatgtcaagggctgc
ttggatgtttatgcatcttttgataagtatgtagctgtagagatgttggatggtgataat
aagtatcagtctgaaaaatacggcctgcaggatgccaaaaaagggatgctttttattgat
ttccctccagttctgcaacttcaactgaagcggtttgaatatgatcatgcacgggatata
atggttaagataaacgaccgttatgagttcccacttcagttggatcttgacagagatgac
gggaaatatctctctccagaagctgataggagtgtgcgcaacctctatactcttcacagt
gtgctagttcacagtggtggagttagtggtggacactactatgccttcatccgccctacc
ctttctaatcaatggtacaagttcgatgatgaacgagtgacaaaagaagacctgaaacgg
gcgttggaggagcagtatggtggcgaggaagagctcccccatactaatcctggactgaat
atgaacccacttaaatttactaagtattcaaatgcttacatgctggtgtacatacgtgaa
agtgacaaagagaaaattgtttgtgatttggaagagacagacatcaatgaagaccttaag
actaggctaagaaaggaagacgaagacaaggagaacaagaaaaaagagaaagctgaggct
cacatgttcaccacatttaaggtggccagagatcatgatttggcagcacaaattggacga
gacatgttttttgatcttgtggattatgaaaaaattcatcctatccgtgtacttaaagac
atgccattcaaccaggttaaggaggagttctcgaaagaatttggtatccccgtccactcc
cagagattttggtggtggtctaagcggcagaaccatacttacaggcccactcggccatta
acacaacaggaggaatcatatactgttggacagcttaaagatgcagcaattcgaatgaac
agttctgaattgaggttgtacttggaggttgtacaggagaatcatttgactcttgcttcg
aggacaaatgatgatattttgcttttcttcaagctctatgaccctgaaaaagaagaacta
agatatgttgggaatcttctcttgaaagcatcaagtacgccatctgatatagtgccaaaa
ttgaatgagatagcaggatttcagcctgatgaagacattgagttgtacgaggaaataaaa
tttgagccaaatattatgtgtgaaccagttgactgtgatgtttccttcagtttaaaccag
attgcagatggagacatattgtgctaccaaaaacgttgttctctggaccaacaccgacat
cccaatgtatcttctttctttgaatatgtccataatagacaggttgtgcacttcagattg
cttgaaaagccaaaacaagatgacttctctctagaactatcaaaacgttccacatatgat
gatgttgttgagaaagttgcacaacatcttggtatggatgatccttcaaaactccgcctt
actcagcacatccctcatttacagcaaccgaaacatcaatacatcaagtatagaagtatt
gatcatctttcggacatgttacttttacgtaaccccaatcagatgtctgacattttatat
tatgaaatactggacattcctttgccagaacttcaaggtctgataacattgagagttgct
tttcaccaagctacacctaatgaggtgctgtttcacattatacgattgccaaagggtagc
acttattctgatttgatcgacgacttaaaatcaagggttcagctatctcgaagtgatgct
gagcttaggctatttcaggtcaacaataacaagatatggaaggtgtaccagcctactgag
aaaatagatgcagttcatgatccaaatgtacctcttcatgttgaggagattcctgaagta
gagaaaagtgccggtccgcgagaccgtttggttcatgtcgtccacttcttcaaagataac
cagcacattcaatactatggagtgccattcttcttccttattcgtgagggcgaggctttg
tcagatatcaaagtgcgcattcagaagaaatttgaggttccagacgagcagtttattaag
tggaaatttgcttatgttgcctacaatcgcccggattacctccaagattcagatattgtg
ttgagccgattccagcagaaaaacatttatggaccatgggaacaatccctaggactggag
cactcagacatgcccaccaaaagggccaatcagaatcgccattcttttgaaaagccggtg
aagatctacaactaa
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integrated database retrieval system
