Triticum dicoccoides (wild emmer wheat): 119323688
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Entry
119323688 CDS
T07278
Name
(RefSeq) pre-mRNA-processing protein 40A-like isoform X1
KO
K12821
pre-mRNA-processing factor 40
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119323688
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tdc03041
]
119323688
Spliceosome [BR:
tdc03041
]
Complex A
U1 snRNP components
U1 related factors
119323688
Complex B
119323688
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FF
WW
Motif
Other DBs
NCBI-GeneID:
119323688
NCBI-ProteinID:
XP_037453284
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All DBs
Position
6B:complement(27540140..27555889)
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AA seq
1011 aa
AA seq
DB search
MASNMQTPGPPQPPRPPMMGSTAPQNMGQPMPMQWPPGPPQQPPQFMQPAPQQYRPVGQA
MPGVNMGMPGQMQHFQQPGPHIPHSGHVPPASQAVPMPYQAARPMSSAPMQPQQQAVFPG
GLMPTMGTPMPPPSYTYQPTSVPPGSQPWGTAPGQGAPLVSPMVQPGHQSLSASVPPVSS
TEPSSADWQEHSSGDGKKYYYNKRTKQSSWEKPAELMTPLERADASTEWKEFTTAEGRKY
YYNKVTKQSKWSIPDELRIARELAEKTSNQQPVREIESTAVAPVGSTSVAPVGSTSVAPV
GSTSVAPVGSTSVSVEPSLPAKQSSSLVGTIAPSSHDAIANLPPPGAGPSYNGDISSSSS
MQNGGTSAAVVAPVTTSTGIPSVASDAGTNRSTYGSSSLPSTTDTKVGASAEDLEEAKKT
MPTAGKINVTPLEDKTSEEEPVVYATKLEAKNAFKSLLESANVQSDWSWDQAMRVIISDK
RYGALKTLGERKQAFNEYLNQRKKIEVEERRVKQRKARDDFLTMLEECKDLTSSLRWSKA
ITMFGHDERFNAVERPKEREDLFENYLVELQKKEKAKAAEEHKRRIAEYREFLESCDFIK
ANSQWRKVQDRLEDDERYARLEKIDRLDVFQDYIRHLEKEEEEQKRIRKEQLRRQERKNR
DEFRKMMEEHVADGTLNAKTYWRDYCSQIKDSRAYLAVASNLSGSMPKELFDDVMEELDK
QYQDDRALIKDEVKSGKIPMLASWTLEDFQAAVTEDEKYKGVSNINIKLIYEDQIERLKE
KDLKEAKKRQRLGDNFLDLLYSIKEITAASTWDDSKSLFDDTQEYRDLGGETYAKELFEE
YIARLKERLKEKERMREEEKAKKEKDREEREKKKEKEKEKKEKDRKDKERDREKEREKEK
GKDRSRRDEMDIDDDVEIHASKDKKREKDKEKKHKRRHHDTTDSERDEKDDSRKSRRHSS
DRKKSRKHTHASDSDSENRHRRHKKDRDSSRKNGGHEELEDGELGEDGEIR
NT seq
3036 nt
NT seq
+upstream
nt +downstream
nt
atggcgagtaatatgcagactcctggtccgcctcagcccccccggcctcctatgatgggt
tctaccgcaccacaaaatatgggacaaccaatgcccatgcagtggccaccaggtccgcca
caacagcctcctcagttcatgcaaccagcgccacaacagtatcggcctgttggtcaggcc
atgccaggagttaacatgggcatgccagggcagatgcaacattttcagcaacctgggcca
catattcctcactctggtcatgttccgcctgcatcgcaagctgttcctatgccgtaccag
gcagctagacctatgtcatcagctcctatgcagccacagcagcaagctgtattccctggt
ggacttatgcccaccatgggcacccctatgccgcctccttcttatacctatcaaccaaca
tcggttcctcctggatctcaaccctggggcacggccccgggtcagggcgcacctcttgtg
tcgccgatggtgcagcctgggcatcagtctctctcagcttcagtgcccccagtgagctca
actgaacctagctctgcggattggcaagagcacagttcaggggatggaaagaagtactat
tacaataagaggacaaagcaatcaagttgggagaaacctgctgagttgatgacccctttg
gagcgggctgacgcttcaactgaatggaaagaatttactacagcagaaggacggaagtac
tattacaacaaagtgacaaagcaatccaaatggtctattcctgatgagctaaggattgca
cgtgaattagcagagaagacatcaaatcagcagcctgtccgggagattgaatccactgct
gttgcccctgttggatccacttctgttgcccctgttggatccacttctgttgcccctgtt
ggatccacttctgttgcccctgttggatccacttctgtttctgtggagccttccttacct
gccaaacagtcttcatctttagtaggaacaattgctccaagctcccatgatgcgatagca
aacttgcctcctcctggtgctggaccgtcgtacaatggggatatatcttcttctagttcc
atgcaaaacggtggaacaagtgctgctgtggttgcccctgttacaacgagcacgggaatt
ccatcagttgcaagtgatgcagggacaaacagaagcacttatggaagttcatctctacct
agtactactgacacaaaagttggagcatctgctgaagatttggaggaggccaaaaagaca
atgccaactgcagggaagatcaatgttactccgctggaggataaaacaagtgaagaagaa
cctgttgtttatgctactaagttggaagcaaagaatgcattcaagtccctgcttgaatca
gcaaatgttcagtctgattggtcatgggatcaggccatgagagttattataagtgacaaa
agatatggtgctctgaaaactcttggagagagaaagcaagctttcaatgagtacttaaac
cagcggaaaaagattgaagttgaggagaggcgtgtcaagcaaaggaaagcacgtgatgat
tttctcacaatgctggaagaatgtaaggaccttacatcatcactgagatggagcaaagca
attactatgtttgggcatgatgaaaggttcaatgctgttgaacgccccaaggagcgtgaa
gatttatttgagaactatctcgtggagctgcaaaagaaggaaaaagcaaaggctgctgaa
gagcacaaaagacgcatagcagaatatagagaatttcttgagtcatgtgatttcatcaag
gcaaactcccagtggcgaaaagttcaagatcggctagaggatgatgaacgctatgcccga
cttgagaagattgaccgcttggatgtttttcaagactatataaggcatcttgagaaagaa
gaagaagaacagaagagaattcggaaggagcaattaaggagacaggaacggaaaaaccgc
gatgagtttcggaagatgatggaagaacatgttgctgatggcacacttaatgcaaaaact
tactggcgtgactactgttcacagataaaagattcacgtgcttacctggcagttgcttca
aacttgtctggctcgatgccaaaagaactctttgatgatgtcatggaggagcttgataag
cagtatcaagatgatagggctttaattaaagatgaagtgaaatctggaaagattcctatg
ttggcctcatggacattagaggacttccaagctgctgttactgaggatgaaaaatataaa
ggagtgtcgaacataaatatcaagcttatttatgaggaccaaattgaaaggctcaaggaa
aaggatctaaaggaggccaagaagcgtcagcgactgggtgataattttctggatctactg
tattcaatcaaggaaattactgctgcttcaacatgggatgattctaaatcactatttgat
gatacccaggaatacagggatctgggtggcgagacatatgctaaagagctttttgaagag
tatattgcccgcctcaaagaaaggcttaaagagaaagagcgcatgagggaagaagagaag
gcgaagaaagagaaagaccgtgaagagagagaaaagaagaaagagaaggaaaaggaaaag
aaggagaaagatcgcaaagacaaagaaagagaccgagagaaggaaagagaaaaggaaaaa
ggaaaagaccggtcaaggagagatgaaatggatattgatgatgatgtggaaattcatgcc
tcaaaagataagaaacgagagaaggataaagaaaagaagcataaaaggcgccaccatgac
accacagattctgaaagggatgagaaggatgactcgaggaaatctcgaaggcatagcagt
gatcgcaagaaatctaggaagcacacccatgcttcagactcagatagtgaaaaccggcat
agaagacacaaaaaggatcgagatagttcccgcaaaaatggtgggcatgaggagcttgaa
gacggtgaacttggagaagatggggagatccgttag
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