Triticum dicoccoides (wild emmer wheat): 119338092
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Entry
119338092 CDS
T07278
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 42-like isoform X1
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119338092
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tdc03041
]
119338092
Enzymes [BR:
tdc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
119338092
Spliceosome [BR:
tdc03041
]
Complex A
U2 snRNP components
U2 related factors
119338092
Complex B
119338092
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
119338092
NCBI-ProteinID:
XP_037466282
LinkDB
All DBs
Position
7B:329059976..329065032
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AA seq
1091 aa
AA seq
DB search
MSSGDDDRITVSKHHHRDKDKDRDHSSSRRHRDKDRPSSRHHRDDRDGERERDRDRDRHH
RDKERDREERKARERAEKEREKEEKREREREEREMEKERERARRREERDREKEKSRRREA
VDEEENEDRDRDRKRRRRSLHRHHHRDVEPEETPLTREEEEDAEEVERRRQKEEDMEAEQ
QRLDDEMERRRRRVKEWQEKKRREQQQEDGTSGGAAAIEADGGGKSGKKWTLDGEESDEE
DVKKLEENAGTGAMDVDLPNMDNGSNGGVGLEEDEIDPLDAFMDSMVLPVVAKLESAATA
MESVLADNAGCLNDKSVKDATSNEDKKRQMMAIGRIMQGDDSDSDYDDANNGEAGSDDED
DAEFIKRVKKTKAEKLVIVDHSKIDYQPFRKNFYIEVKDIKNMPAEEAAAYRKLLELKVH
GKDVPKPIKTWIQSGLTSKLLDTIKKLGFEKPMPIQAQALPVIMSGRDCIGVAKTGSGKT
LAFVLPMLRHVKDQPPVVPGDGPIGLIMAPTRELVVQIYSDIKKFSKVLGINCVPIYGGS
GVAQQISELKRGAEIVVCTPGRMIDILCTSSGKITNLRRVTFLVLDEADRMFDMGFEPQI
TRIVQNTRPDRQTVLFSATFPRQVEILARKVLTKPVEIQMGGRSVVNKDITQLVEVRPES
ERFFRLLELLGEWFANGKILVFVQSQDKCDSLLKELFQHGYPCLSLHGGKDQNDRESTLA
DFKSNVCSLLIATSVAARGLDVKDLELVVNYDVTNHYEDYVHRVGRTGRAGRKGCAVTFI
SEEEERYAPDLVKALELSEQAVPEDLKALADRFMSKVKQGTEQAHGTGYGGSGFKFNEEE
EEARKSAKRAQAREYGYEEDKSDSDSDDEGGVRKQGGDVAAQAIAAAQAAAALAAARATS
NAQQQVPATTAGSLLPLPVAPNQQNNEATQRALDAAYNLQKNLARIQAHAVPEHYEAELE
INDFPQNARWKITHKETLVPIQEWTGAAITTRGTFIPQGKIVGANERKLYLFIEGPNESS
VKKAKAELKRVLEDCANQALNLPDALYCCKQRIVFLRRWCDWWSKRLGAHIFRDRKIVLV
IMYSLRPKMRE
NT seq
3276 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtctggcgacgatgaccgcatcaccgtctccaagcaccaccaccgggacaaggac
aaggaccgcgaccactcctcctctcgccgccaccgcgacaaggaccgcccctcctctcgc
caccaccgcgacgacagggacggtgagcgggagcgggaccgagatcgcgaccgccaccac
agagacaaggagcgggatcgagaggagcggaaggcgcgggagcgggcggagaaggagcgc
gagaaggaggagaagagggagagggagagggaggagagggagatggagaaggagagagag
cgggcgcgtcgtcgcgaggagcgggatagggaaaaggagaagtcgaggaggcgggaggcg
gtcgatgaggaggagaacgaagatcgtgaccgcgaccgcaagcgccgccgtcggtccttg
catcggcaccaccaccgtgatgtggagccagaggagacaccgctgacaagggaggaggag
gaggatgcggaggaggtggagagacggcggcagaaggaggaagacatggaggctgaacag
cagcggcttgatgacgagatggagcggcgccgccgccgtgttaaggagtggcaggagaag
aagcgccgtgagcagcagcaggaggatggtaccagtggtggtgcagctgccattgaggct
gatggtggaggcaagtcggggaagaagtggaccttggatggtgaggagtcggatgaggag
gatgtgaagaagttggaggagaatgctggcactggtgccatggatgttgacctaccgaac
atggataatggcagtaacggcggggttggtttggaagaggatgagattgatcccctcgac
gcgtttatggactccatggtgttgccagtggttgcaaagctcgagagtgccgcaacagcg
atggagagcgtgcttgctgacaatgcaggttgtttgaatgacaagagtgtgaaggatgcc
acaagtaatgaggataagaaaagacagatgatggcaattgggagaattatgcaaggggat
gactctgactcagattatgatgatgctaataatggcgaggctggatcagatgatgaggat
gatgcagagttcataaaacgtgtcaagaagacgaaggcagagaagttggttattgttgac
cattccaagattgattaccaaccattccggaagaatttctatattgaggtgaaagacata
aaaaatatgccagccgaggaagcggcggcctaccggaagctgttggagctcaaggtgcac
gggaaagacgttccgaagccaataaagacatggatccagagtggtctgacaagtaagcta
cttgacactatcaagaagcttggttttgagaaaccgatgcctatacaagcacaagcgttg
ccagtcataatgagtggacgtgattgtataggggttgcaaagactggatctggtaagact
ctagcatttgtcttgcccatgctgaggcatgtcaaagatcagccgcctgttgtgcctggg
gatggccctattgggcttattatggctcctacgagagagcttgtggtgcaaatatattca
gacataaaaaagttctccaaggtgctcggcatcaactgtgttcctatatacggaggttct
ggggttgcccagcagatcagtgaactgaagaggggtgctgaaattgttgtttgtacacca
ggcaggatgattgatatcctttgcactagcagtggcaagattactaaccttcgaagagtg
actttcttggtgctagatgaagctgataggatgtttgatatgggttttgagcctcagatt
actcgaatcgttcagaacacccgtccggataggcagactgtccttttctctgccactttt
ccacggcaggtggagatactggcacgtaaagtgctgacaaagcctgttgagattcagatg
ggtgggaggagtgtcgtgaacaaagatatcacacaactggtggaagtgcgaccagaaagt
gagaggttctttaggctgttggaattgcttggggagtggtttgcaaacggaaaaattctt
gtttttgtacagtcgcaagataagtgtgattctctactgaaagagctgttccagcacgga
tacccatgtttgtctctacatggtggaaaggatcaaaatgaccgtgaatcaactcttgct
gatttcaagagtaatgtatgcagcttactgattgctaccagtgttgctgcaaggggttta
gatgtgaaagatcttgagcttgttgtcaattatgatgtaactaatcattatgaggactat
gttcatcgggtcgggcgaacgggtcgtgctggtaggaagggctgtgctgtaacttttatt
tctgaggaagaggaacgctatgcaccagaccttgttaaggctttggagctatctgaacag
gccgttccagaggacctgaaagccttagcggatcgatttatgtcaaaggtcaaacagggg
acagagcaggcccatggaacaggctatggtggaagtggtttcaagttcaatgaagaagag
gaggaagcacggaaatctgcaaaaagggctcaggcaagggaatatggatatgaggaggac
aagtcagattcagattctgacgatgaaggaggtgtgcgtaaacagggaggtgatgttgca
gcacaagctattgctgctgctcaagctgccgctgctttggctgctgccagggctactagt
aatgcccagcagcaagtaccagccacaacggctggctccttgcttcctctgccggtcgca
cctaaccaacaaaacaatgaagccacacaacgagcacttgatgctgcatacaacttacag
aaaaatttggcaaggatacaggcccatgcagttccagaacactatgaagcggagcttgag
attaatgatttcccacaaaatgctcgctggaagatcactcacaaagagacattggttccc
attcaggaatggactggagcggcaattactacaaggggaacctttattcctcaaggcaaa
attgttggtgctaacgagcgcaagctgtacctgttcattgagggccccaatgagtcttcc
gtcaagaaggcgaaagcagaattgaagcgtgtccttgaggattgtgccaaccaggcactg
aatcttccagatgcactatactgttgcaagcagagaatcgtgtttctgaggcggtggtgc
gactggtggtcgaagaggctgggggcccatattttcagagatagaaagattgtgcttgtt
atcatgtactccctccgtcccaaaatgagggagtaa
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