Torulaspora delbrueckii: TDEL_0B01920
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Entry
TDEL_0B01920 CDS
T02236
Symbol
TDEL0B01920
Name
(RefSeq) hypothetical protein
KO
K14400
pre-mRNA cleavage complex 2 protein Pcf11
Organism
tdl
Torulaspora delbrueckii
Pathway
tdl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tdl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
TDEL_0B01920 (TDEL0B01920)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tdl03021
]
TDEL_0B01920 (TDEL0B01920)
03019 Messenger RNA biogenesis [BR:
tdl03019
]
TDEL_0B01920 (TDEL0B01920)
Transcription machinery [BR:
tdl03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
TDEL_0B01920 (TDEL0B01920)
Messenger RNA biogenesis [BR:
tdl03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
TDEL_0B01920 (TDEL0B01920)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CFIA_Pcf11
CID
VHS
zf-C2H2
zf-H2C2_2
zf-C2H2_6
TFIIA
zf-C2HE
Motif
Other DBs
NCBI-GeneID:
11504163
NCBI-ProteinID:
XP_003679532
UniProt:
G8ZNX7
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All DBs
Position
2:339488..341320
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AA seq
610 aa
AA seq
DB search
MDKEGEIIVRDFTSILEELTFNSRPIITTLTKIAEENITYAQYFADALEARIDKCPPNQK
LCAFYALDSICKNAGSPYTIYFSRNLFTLYKKTYLLVDNGTRTKLIHMFKTWMDPNDSTG
GLSPLFERSALERIEQFLIKASALHQKNFQSMLPTPTVPLLTREIDKLTTLTNERLKSQP
NDEKLKMKLVVLTQLKQELHREKLASGALKQLQLQLRQIFAQDQQYLQDIQRQNQQQQQR
TQLQQQQQQQQQMSKPSATSSNGSSFIPLFGDNSNTGASLFGNSIGIVGPPNFQNLERSN
QLSRMQNLYQSLDSEGLIYKPPKESIVTLYSKLAGDDNLTSNNADRQPEKNLPPIPVLTG
ILSDCKAYFATVNVDILNTPNLLLSQHIITSDNPVVNSNLIHLLYRAKPYKCNICGKRFG
NNVQEKKAQADHLDWHFRINKRIKGSEITAGSNGNTTNATQKNIQSRNWYLQDSQWITFK
DDEIVSTTFSTNQNAKMTTASLDDQTQYSSTTKTNEEKKNLGVFAIDEKVLLKKHVVVPE
SAEDMSFKCPICKEVVAGLYDEELGEWVWRNAMEVDNKYFHATCYYEAARNSTKAGVQLD
LESLKHLVTE
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atggataaggagggagagatcattgtgagggatttcaccagtatcctggaagaactgacg
ttcaattcgaggcccattataacaactttgacgaagatagcagaggaaaatatcacatat
gctcagtattttgcagatgcgctagaggctaggattgataaatgtcctccgaatcagaaa
ctgtgtgcattttatgccctggattccatttgtaagaatgcgggaagtccttatacgatt
tattttagcaggaatctgttcacattgtacaagaaaacatatcttttagtcgataacggt
acgaggaccaagcttattcacatgttcaagacttggatggatccaaatgactcgacgggt
gggctatctccgcttttcgagcgatctgcgcttgagaggattgaacagttcctgataaag
gccagtgctttgcaccagaagaatttccagtctatgctaccaacaccaactgtaccttta
ctcacgcgagagattgataaattaactacccttacaaatgagcgtttgaagagccaacct
aatgatgaaaagttgaagatgaaattggtggttctgacacaattgaagcaagagttgcat
agagagaaactggcatcaggtgcgttaaaacagctccagttacagttgagacagattttt
gcacaggatcagcaatatttgcaggatattcaacggcaaaatcaacaacaacagcagcgg
acgcaattgcaacagcaacagcagcaacagcaacagatgtctaagccatctgctacgtct
tcgaatggcagctctttcattccactgtttggagataactcgaacactggagcttcatta
tttggcaactcgatcggtatcgttggacctccaaattttcaaaacttggaaaggtcaaat
caactttctaggatgcaaaatctataccagtcactagactcggaaggcttgatttacaag
cccccaaaagaatctattgtgactttatactcaaagcttgcgggtgatgataatcttaca
tcaaataatgccgacagacaacccgaaaagaatcttcctccaatcccagttttgaccggt
atactctctgattgtaaagcctattttgcgacggtgaatgtagatatcctaaatacccca
aatttgctactgtcacaacatatcataacttccgataatccagttgtgaattccaacttg
atccatctactatatcgtgccaagccttacaaatgtaacatctgtgggaaaagatttggt
aataacgtgcaagagaaaaaggcacaggcagatcatttagactggcattttagaataaac
aagaggatcaagggttccgaaataactgctggttcaaatggtaataccactaatgctacc
caaaaaaatatacaatcaagaaactggtacctacaggactcccagtggattactttcaaa
gacgatgagattgtctctactacgttctccacaaatcaaaatgctaagatgactactgct
tctttagacgatcaaacacaatacagttcaacgactaaaactaatgaggagaaaaagaat
ttgggtgtatttgccatcgatgaaaaggtccttttaaagaagcatgttgttgtacccgaa
tctgcggaagatatgtccttcaaatgcccaatttgcaaagaagttgtagctggtttatat
gatgaagaactcggagaatgggtgtggaggaatgcaatggaagtggacaataaatatttt
catgccacctgctactatgaagccgcaagaaatagtacaaaggctggagtgcaactcgat
cttgagagtctcaaacacctggtgactgaatag
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