Triplophysa dalaica: 130407702
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Entry
130407702 CDS
T09616
Name
(RefSeq) rap guanine nucleotide exchange factor 6-like isoform X1
KO
K08020
Rap guanine nucleotide exchange factor 6
Organism
tdw
Triplophysa dalaica
Pathway
tdw04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
130407702
BRITE hierarchy
Motif
Pfam:
RasGEF
RasGEF_N
PDZ
RA
cNMP_binding
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
130407702
NCBI-ProteinID:
XP_056586832
EnsemblRapid:
ENSTDLG00000021794
LinkDB
All DBs
Position
19:19515046..19575352
Genome browser
AA seq
1586 aa
AA seq
DB search
MNSSVDLSLKNALKTQPSRRTAEDLNTIYSHLYHMDVLSHLREHQLRSMCMTARYQNYEA
NRILFYADTISTCWYILLTGSVFVKEHMYLARCCFGTQRGGRRGCECITLEPSEMIVVEN
TSDSEDGALQRDGSQQHSRRRFRKVNPRGERQLITDNQDPSATDYTNEQLPGDLSKMHLT
DRPHVPASQSGCSIASDSGSSSLSDIYQATESEMGDVDLSGLPEAPVDSEDEEEDEDIER
SSEALLVRDLVRECLEKDAVDRTDDDIEQLLEFMHQLPAFANMTMSVRRELCRVMMFEVF
EQEGTVILQDKQELDLWYVILNGAVEITYGDGRSEILCMGNSFGITPSLDKQFMNGVVRT
RGDDCQFVCIAQEDYCRILNHVEKNTHKVEEEGEIVMVKEHRELDRSGTRKGHVVIKGTP
ERLIMHLVEEPSVVDPTYIEDFLLTYRTFLSSPMEVGKKLLEWFKVDSLRDTVTRIVLLW
VNNHFNDFEGDPVMTQFLEDFEKLLDSSKMKGHLRLLNIACAAKAKCRQITLQKASRESA
LLFAIQGGSERGFGIFIEAVEVGSKAAEAGLKRGDQIMEINGQNFENISYSKAMDFLKNN
THLSLTVKTNIFVFKELQSRLKNEKKNGAPHIPKIQEKKSNRFSIAELPGDMEFPTDSKS
HRKMKANTVSGGRNKIRKMLEKTRFSILPPKPFSDSGMAQSQDDSVVGTKQCRHSVAIMP
IPGSLSSSSPDLLHPAASALDFTNPSVASFYYIPDQVIRVFKADQQSCYIIISKDTTAKD
VVSHVVHEFGLIAASDTYSLCEVSVSPEGVIKQRRLPDQLSKLADRIQLNGRYYLKNNME
TETLCSDEDAQELLRESQIGLLQLSTVEVATQLSMRDFGLFRNIESTEYVDNLYKLDPGG
GGSNRLKQFEDIINQETFWVATEILGEPNTLKRMKTIKHFIKIALHCRECKNFNSMFAII
SGLNLAPVARLRSTWEKLPSKYEKLFRDLQDIFDPSRNMAKYRNILSSQSVQPPIIPLFP
VVKKDLTFLHEGNDSSVDGLVNFEKLRMIAKEIRHVVRMTSANMDPALMFRQRKKRWKSL
GSLSQGSTNSNLLDVQSNHKKRVRRSSLLNAKKLYEDAQMARKVKQYLAHLEVETDEEKF
QIMSLQCEPAYSTLSKNLSERRSAKSDMSPVATRSGLSSAKSQNRVSQVLQVPPVSLYPL
RKKSIAKDLAAAFSPNSPHTQKKAAPSTDDTCVRRPEGPSTGSSLHSSPTVSPQGSPRKV
GGALKQNSGQLHLSGSSSSLTSEASTRAAGSGPTGRTYGIGYALMPAGRSDLSDSSEISS
RSSIVSNCSVDSMLTAASASCPPESSNITDCCHPGTSSSLARYPVTRGSTFTSSTSTEEL
PASELADSGRGSWTSCSSNSHDNLQTLPGQRALDLLNHRHTPLCGPIAEVPGLAEDSCSE
LGHSRQSWTSSSSLSDTYEGAYGTIKRRAGDPAASDSQSNDPAYKTITSSTEKGLIVYCV
TSPCKDDRFKAPPPTPPGYQGLALADTHAQEGGVLRPAHIKPPDYNVALQRCKLRNSLAE
PTLSRPPSVLLLPHGDSEEDEQVSAV
NT seq
4761 nt
NT seq
+upstream
nt +downstream
nt
atgaattcctcagtggatttatcgctgaagaacgcgctgaaaactcaaccatcacgacga
acggctgaggacctgaacacaatctacagtcacctgtaccacatggacgtgttgtctcac
ctcagagaacatcagctcaggtccatgtgcatgacggccagataccagaactatgaagcc
aaccgcattctcttctatgccgacacaatctccacgtgctggtacattctgctcacaggc
tctgtgtttgtgaaggagcacatgtacctggcgagatgctgttttggaactcagcgtgga
ggaagacgaggctgtgaatgcatcactttagagccgtcagaaatgattgtggtggagaac
accagcgatagtgaagatggggctctacagagagacggatctcagcagcactcgcggcgg
cgctttcgtaaggtcaaccctcgaggagagcgccaactgataacggacaatcaggacccc
tcagcgacggattatacgaatgagcagcttcctggtgacctcagcaagatgcacctgaca
gaccgcccccatgtgccagccagccaatcaggatgcagcattgccagtgactcagggagc
agcagcctttcagacatctatcaggccacagagagtgagatgggtgatgtggatctctca
ggtcttcctgaagctcctgtggactctgaggatgaggaggaagatgaagacattgagcgc
tcctctgaggctcttctggttcgagatctggtgcgagagtgtctggagaaggatgccgtg
gatcggaccgacgatgacatcgagcagctgctggagttcatgcatcagctgccggcgttt
gccaacatgaccatgtctgtgaggagagagttgtgtcgggtcatgatgtttgaggtgttt
gaacaggaaggaaccgtcatactgcaggacaaacaggagttggatttgtggtacgtgatc
ctcaatggtgctgtggagattacctatggagacggtcgctcagagatcctgtgtatgggg
aacagtttcggcatcacgccgtctttagacaaacagttcatgaacggtgtggtgcgcacc
agaggagacgactgccagttcgtgtgcatcgctcaggaggactactgtcgtatcctcaac
cacgtggagaagaacacacataaagtggaggaggagggtgagatcgtcatggtgaaggag
cacagagagctggaccgcagcggcaccaggaagggacacgtcgtcatcaagggcacacct
gagcgtctcatcatgcatctggtggaggagccgtcagtcgtggaccccacttacatcgag
gactttctgctcacataccgcacattcctctccagccccatggaagtgggcaagaaactt
ctggaatggttcaaagtggacagtctcagagacacggtgacgaggatcgtgttgttgtgg
gtgaacaatcatttcaatgattttgaaggagatcctgtcatgactcagttcctggaggac
tttgagaagttactggattcctctaaaatgaagggtcacctgcgtctgctgaacatcgcg
tgcgccgctaaagccaagtgtcgtcagatcacccttcaaaaggcgtccagagagtctgcg
ctgctcttcgcgattcagggcggcagtgagagaggcttcggcatcttcatcgaggccgtc
gaggtggggagtaaagcggcagaggcgggactcaagcgtggagatcagatcatggagatc
aacggacagaactttgagaacatctcgtactccaaagcaatggacttcctgaagaacaac
acacacctctctctcaccgtcaagaccaacatctttgttttcaaagagcttcagagtcgc
ttgaagaatgagaagaagaacggtgctccgcacatcccgaagattcaagagaagaagagc
aatcgcttctccatcgctgagctgcctggagacatggagtttcccaccgatagcaagagt
cacaggaagatgaaggctaacacggtgtccggaggacgcaacaagatccgcaagatgctg
gagaagaccagattcagcattctgccacctaaacccttcagtgattctggtatggctcag
tctcaggatgacagtgtcgtgggcactaaacagtgccgtcacagcgtggcgataatgccc
atccccggcagcctgtcgtccagcagcccggacctgctccatcctgccgccagtgctctg
gacttcaccaacccatcagtggccagtttctactacattccagatcaggtgatccgcgtg
ttcaaggcggaccagcagagctgctacatcatcatcagtaaagacaccacagccaaagac
gttgtgtcgcacgtcgtccatgagtttggtctcatcgccgcctccgatacatactcgctc
tgcgaggtctccgtaagtcctgaaggagtcatcaagcaacgccgattgcccgaccagctc
tccaaactggccgaccgcatccagctcaacggcaggtactacctgaagaacaacatggag
acggagacgctgtgctctgatgaagatgctcaggagctgctgagggaaagtcagatcggc
cttcttcagctcagcacggtggaggtcgccacacagctctccatgagagactttggcctc
ttccgtaacatagagtccaccgagtacgtggacaacctgtacaagctggaccccggcgga
ggcggcagcaaccgtctgaagcagttcgaggacatcatcaaccaggagaccttctgggtg
gccaccgagatccttggcgagcccaacacactcaaacgcatgaagaccatcaaacacttt
atcaagattgccctgcactgccgcgagtgtaagaacttcaactccatgttcgccatcatc
agtggtcttaacctggccccggtcgctcggttgaggagcacgtgggagaaactgcccagt
aagtacgagaaactcttccgggatcttcaagacatctttgacccgtcacgcaacatggcc
aagtaccgcaacatcctgagcagtcagagcgtccagccgcccatcattcctctgtttcct
gtggtgaagaaagatctcaccttcctacatgaggggaacgactccagtgtggacggcctg
gtgaattttgagaagctacgaatgatcgccaaagagattcgacacgttgtgcgcatgacg
tcggccaacatggacccggcgctcatgttcagacagaggaagaagagatggaagagttta
ggatctctgagtcagggcagcaccaactcaaacctgctggatgtccagagcaaccacaag
aagcgcgtgagacgcagctcgctgctaaacgctaagaagctgtacgaggacgctcagatg
gccaggaaggtgaagcagtacctggcacacctggaggtggagacggacgaggagaagttt
cagatcatgtctctgcagtgtgaacctgcctacagcacactatctaagaacctgagcgag
cggcgctccgctaaatccgacatgtctcctgtggccacgaggtccggtctgtcttcggcc
aagtctcagaaccgtgtctctcaggtccttcaggttcctcctgtgagtctgtatcctctc
cgcaagaagagcatcgctaaagacctggccgccgcattcagtccaaactcacctcatact
cagaagaaagcagctccttccactgatgacacgtgtgtgaggagacctgagggcccgtcc
accggctcttccctgcactccagtcccactgtttccccacaggggtctcctcgcaaagtg
ggcggagctcttaaacagaacagcggtcagctgcacctgtcgggttcgtcgtcatctctc
acaagcgaggctagcaccagagcggcaggcagcgggccgacaggacgcacctacggcata
ggttacgctctcatgcccgccggcagatcggatctgtcagactccagcgagatctcttct
cgctccagtatcgtcagtaactgctccgtagactccatgctcaccgcagcttcagcttcc
tgcccgccggagagcagcaacatcacagactgctgtcaccccggcaccagttcatctctg
gcccgatatccagtaacgagaggctcgacgtttacctcctccaccagcactgaagagctg
ccggcctctgaactggcggacagcggccgagggagctggacgtcctgctccagtaactct
cacgacaacctccagactcttccgggtcagcgcgctctggacctgctcaaccatcgccac
acgcccctgtgtgggcctattgccgaggtgccgggcctggcagaggacagctgctctgag
cttggtcactccagacagtcctggacatcctccagctctctgtctgacacctacgagggc
gcttacggcaccatcaaacgcagagccggagatccggcggcttctgacagccaaagcaat
gaccccgcgtacaaaacgatcacgtccagtacagagaaaggactcatagtgtactgtgta
acgtcgccctgcaaagacgacaggttcaaagctccgccccccactccgccgggttatcag
ggactggctctggccgacacccatgcacaagaaggaggagttttacggccggcccacata
aagccgcccgactataatgtggccttgcagagatgcaagctgcgaaacagcctggctgag
ccgacactgtccagaccgcccagtgttcttctccttcctcacggtgatagcgaggaggat
gagcaggtgtctgcagtgtga
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integrated database retrieval system
