Triplophysa dalaica: 130418910 Help Entry 130418910         CDS       T09616                                  Symbol col27a1b Name (RefSeq) collagen alpha-1(XXVII) chain B   KO K19721   collagen type V/XI/XXIV/XXVII, alpha Organism tdw  Triplophysa dalaica Pathway tdw04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:tdw00001]  09140 Cellular Processes   09142 Cell motility    04820 Cytoskeleton in muscle cells     130418910 (col27a1b)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:tdw00536]     130418910 (col27a1b) Glycosaminoglycan binding proteins [BR:tdw00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    130418910 (col27a1b) BRITE hierarchy Motif Pfam:  Collagen COLFI GH131_N Laminin_G_2 Motif Other DBs NCBI-GeneID:  130418910 NCBI-ProteinID:  XP_056601093 EnsemblRapid:  ENSTDLG00000011113 LinkDB All DBs Position 4:complement(3207451..3274861) Genome browser AA seq 1698 aa AA seqDB search MHQTPRRSNEVSAMEPDNAPISKLKAAGVGGRAVFLFMVLYCTCCMGFAQSQSEDVDVLQ RLGLLGKRPLFGTRSTPQGVIPFKSGVILTPRARIDVPVKSIVPVSLGTTFTLILSVCSH RINSAFLFTIATKRKRLQLGVQFIPGKVLVHLGQNTVYFSYDVHNGQWHNMAVEIQAESV TLYTSCGKTSVHANLHFKNEEMLDPEGSFRLGKMSQKSVPFEGAVCQFDIHPSAKAAHNY CEYIKKQCRDADTYRPNFPPLLPLLPLDPNVSFTVPTPIIRSTPLDRHLIPSLQISHETL QGPNTSALTSFDPVTVLSVPNTVPPILTQPTMQPPLQAMALTVTATLASETTPKQTQQSR SKKNLMRPTINEKMLQHNATDVTIKPTWNKMDIPTSAGTKPEPLSTFRTLDVTTLSSQRS PLQVTFPEAKPTSFTPVTTAATDGLQTFDLEPTQYSLLAGASGAPGLKGEPGPPGPPGPP GKPGLHGKRGPRGSPGPHGKPGLQGPPGPKGRKGDPGISPGRTPSGVKGDPGILGLPGLI GQAGLKGQKGHPGPPGHPGDQGERGPDGSPGAKGYPGRQGLPGPIGNVGPKGAQGFIGMS GVFGLPGPDGERGLPGVPGKKGKMGRPGFPGDFGERGPPGPDGNPGEMGSPGPVGIPGLI GDMGPYGIVGLPGTVGLKGVQGNPGEPGLKGDKGEVGLPGQPGESGFQGDKGILGLPGSP GIQGKPGPQGERGDPGPAGLQGPPGSEGFPGDIGAPGLNGDEGSKGTAGAKGIPGPRGVS GLEGDQGPTGPAGPPGLEGRPGRKGFPGSPGEDGMKGEPGTNGGAGMLGEKGLIGFVGPV GETGLAGEKGDRGDIGLPGPPGEKGSMGHPGVPGERGPSGPPGTPGPPGSRGLGGTRGSK GQRGARGPDGAVGEKGLMGVQGPDGPPGKEGFAGPMGTIGETGEAGANGFPGVQGPTGPP GAKGILGEPGLSGPPGTTGPLGELGAVGLPGKVGEQGLPGEPGEKGEIGSPGNMGEQGLV GSRGDPGLDGEAGPSGPDGAKGEKGDIGMEGEMGERGTIGFKGEEGRPGDPGLTGIKGPE GTHGKIGERGKPGEKGSKGHQGHLGETGPIGAQGVTGFIGPKGSRGTTGFTGAPGKMGLL GEPGLVGYEGHKGTQGPLGSPGSKGEKGEQGDDGKVEGLPGPPGDIGPVGNRGERGEAGD PGYPGHEGVPGERAKQGAPGLPGHIGPKGFSGHKGSKGNKGQKGKNGLRGTSGGRGSPGT DGHPGPRGVIGREGLEGNPGIDGPPGKDGAKGMPGEHGTDAEVGMPGKPGPRGETGAQGL PGIQGSFGPKGESGLPGQIGPPGKRGFNGGVGFPGKQGERGVKGQPGDAGEQGLPGVFGI FGPKGPPGDLGPVGIQGPKGPQGLRGMQGAIGPVGIIGPSGNHGPQGDKGSKGEMGAQGP RGPPGPRGPPGPPGPPGISLALEKEALGAALHLIVDSRSAFRSEFYHDTDLPMLDQGAEI LKTLHYLSTLIHSIKNPLGTQENPARVCRDLFDCEQRLNDGAYWIDPNMGCSSDNIEVTC NFTGGGQTCLKPVAVSKLEMGVSLIQMNFIHLLSSEAVQMITIHCLNVPVWASGDSNTPS SSAVYFKAWNGQIIESGGFIEPETIKDECWITDGRWHQTQFVFRTLDPNLLPIVEVFNLP VTKPGSHYHLEVGPVCFL NT seq 5097 nt NT seq  +upstreamnt  +downstreamnt atgcaccaaacaccacggaggagcaatgaagtaagcgcgatggagccggacaatgccccg atctccaaactcaaagcagctggagtcggggggagagctgtgtttctctttatggtcctg tactgtacctgctgtatggggtttgcacaatcacagtctgaagatgtggatgtcctgcaa aggctgggattgctcggcaaaagacctttatttggaacacgctccacacctcaaggagtc ataccatttaaatccggagttatccttacgccgagggcgcgaatcgacgtaccggtaaaa tccatcgtacctgtgtcgttgggcacaacatttactctcatcctgagcgtgtgttctcat cgcattaacagcgcttttctcttcaccattgcgacgaagagaaaaagactccagctggga gttcagttcatccctgggaaagttttggttcatttgggccagaacactgtatatttcagt tacgatgtccacaatggccagtggcacaacatggccgtggaaatccaagccgagagtgtt acattatatacttcttgcgggaagacgagcgtacatgcaaatttgcattttaaaaacgag gagatgctggatccggagggctcgtttcgtttgggaaagatgagccagaaatctgtgccg ttcgaaggagccgtatgccagtttgatatacatccttctgcaaaggcagctcataattat tgcgagtacattaagaaacaatgcagggatgctgatacctatcggccaaactttcctcca cttcttccgctgttgcctttggatcctaacgtgtctttcaccgttccgacaccaatcatc agatcaaccccactcgacagacacttaatccctagtttacaaatcagtcatgaaactttg caaggcccaaacacatccgctttaacatcattcgaccctgttactgtcctgtctgtaccc aacacagtgccaccaatattaacccagcccacaatgcagccccccctgcaggccatggca ttaactgtcacggccaccctagcaagtgaaacaacaccaaagcaaactcaacaaagcaga tctaaaaagaacctcatgaggccgactataaatgagaaaatgttacaacacaatgcgacg gatgttaccatcaaaccaacctggaataaaatggatatcccgacttctgcaggaacgaaa cctgaaccattaagcacatttaggacgttggacgtgacaacactttcatcacagagatcg ccactgcaggtgaccttccccgaagccaaaccaacgtcttttactcctgtcaccactgca gctacagacggtctccaaacctttgacctggaaccaacccagtactccctcttagctggg gcatctggggcacctggtctcaaaggagaacctggacctccgggacctccagggcctcct ggcaaacccggattacatgggaaaagagggcccaggggttctcctggtccacatggaaaa ccaggacttcaaggccctcctggacccaagggaagaaagggagacccgggaatttcaccg ggcagaacgccaagcggagtaaaaggggaccctggaatattaggactacctggacttatt ggtcaagctggtctgaagggacaaaaaggccaccctggtcctcctggccacccaggagat caaggagaaagaggacctgatggaagcccgggtgccaaaggttatcctggcaggcagggt ttgccaggacctataggaaacgtgggaccgaagggagcacagggcttcattggaatgtcg ggtgtcttcggtcttcctggtcctgatggagaaagaggtttacctggcgttcctgggaag aagggcaagatgggtaggccgggctttccgggtgattttggggaacgaggaccaccggga cccgacggaaacccaggcgagatgggttctccaggtccagttggcatcccaggccttatt ggtgacatgggcccttatggaattgtgggtcttcctggaacagtgggattgaagggcgtg caaggaaacccaggggagccaggactgaaaggtgataagggtgaagtcgggttgccaggc cagccaggagaatcaggatttcaaggtgacaagggcattctaggtttacccggttcacca ggaattcaggggaagccagggccacagggggagcgtggtgatcccgggccagctggtttg caaggtccacctggttctgagggttttccaggagatattggagcaccaggactgaacggt gacgagggctctaaggggacagcaggagcgaaagggattccaggtcctagaggagtttct ggcctggagggcgatcagggcccaacaggaccagccggacctccaggactagagggcaga ccggggaggaaaggtttccctgggagtccaggggaagatggaatgaagggcgagcccggg actaatggaggggctgggatgcttggtgagaagggtcttatcggattcgttgggcctgtt ggagagacgggacttgctggagaaaagggggatcgtggtgacattgggcttccagggcca cctggagaaaagggctcaatgggacacccaggggttccaggtgaaagaggaccatctgga ccaccaggtacacctgggcctcccggttccaggggactcggtggcaccaggggatccaaa ggccaacggggtgcaagaggaccagatggagcagttggggaaaaagggttgatgggagtc cagggtcccgatgggccaccaggaaaagagggtttcgctggaccgatgggtacaattggt gaaactggtgaagctggagcaaacggatttccaggtgttcaaggaccaactgggcctccc ggagcaaagggaattttaggtgaacctggtctgtcagggcctcctggaacaacaggtcca ttgggtgagcttggagcagtgggtctgccgggaaaggtcggggagcagggcttaccaggg gaaccaggagagaagggtgagattgggtctcctgggaatatgggagaacaaggtcttgtt ggatctagaggagaccctggtcttgatggggaggctggtccgagcggtcctgatggtgcc aagggtgaaaagggcgatatcggaatggagggtgaaatgggtgaaaggggaaccatcgga tttaaaggagaggaaggacgtcctggagatcctggcttgacgggcatcaagggccctgag ggtacacatggaaaaattggcgagaggggaaaaccaggcgagaagggcagcaaaggtcat caaggtcaccttggcgagactggaccaattggagcacagggcgttacgggcttcatcggg ccaaaaggaagcagaggaacaactggattcacgggtgctcctgggaaaatgggtctgctg ggagaaccgggcttagtgggatatgaaggtcacaaaggaacacaaggtccattgggatcc ccaggatcgaaaggtgaaaagggtgaacaaggagatgacgggaaggttgaaggtctgcct ggtccaccaggtgacatcgggccagtcggcaacagaggagaaagaggagaagcgggtgac cccggatacccaggtcatgaaggtgtgccaggtgaaagagcaaaacagggtgcccctgga cttcctggacatattggacccaaaggtttctcaggccacaagggatccaaaggcaataaa ggtcaaaaaggcaaaaatggtcttcgtggtacatctgggggtcgagggtcacctggtacc gatggtcatcctggccctagaggagtaattggtcgcgagggtcttgagggtaatcctggg atagatggacctccagggaaagatggtgctaaaggaatgccaggtgagcatggaaccgat gccgaagttggaatgccaggcaaaccaggtcctcgaggcgaaacgggtgcgcaaggtttg cctggaattcaaggatcttttgggcccaagggtgaaagtggccttcctggccaaatcgga cctccaggcaagagaggatttaatggaggggttggatttcctggaaaacaaggagaacga ggggtcaaagggcaacctggtgacgctggtgaacaagggcttcctggagtttttggaatc tttggaccaaagggtccaccaggagaccttggaccagtgggcatccagggcccgaagggt cctcagggtttaaggggtatgcaaggagccatcggacccgtcgggatcattgggcctagc ggtaatcatgggccgcaaggagacaaaggaagtaaaggggaaatgggtgctcagggacca aggggacctccaggtcctcgcggaccacctggacctccaggccctcctggtatatctctt gctcttgaaaaagaggcgcttggtgctgctttgcatcttattgttgattcccgctcagca tttaggtctgagttttatcacgacactgaccttcccatgctggaccagggagccgaaatc cttaagaccctgcactacctcagtaccctcatccacagcatcaagaacccgttgggaacg caggagaatccggccagggtgtgtcgagatctgttcgattgcgagcaaaggttgaatgac ggtgcttattggatcgatcctaatatgggctgttcctctgataatattgaggtgacctgt aacttcaccggtggaggacagacctgtcttaaaccagtagctgtttccaagttggagatg ggcgtgagtctgatccagatgaacttcatccatctcctaagctctgaagctgtacagatg attaccatacactgcctgaacgtccctgtttgggcatcaggggactccaacaccccctcc tccagtgcagtgtattttaaagcctggaacggacagatcatcgagtcagggggcttcatc gagcccgagacgataaaggatgagtgttggatcacagatgggagatggcaccagacacag tttgttttccggacgctggacccaaacctgctgcccattgtggaggtcttcaacctgccc gtcactaaacccggctcacattaccacctggaggtgggaccggtgtgctttttataa

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