Triplophysa dalaica: 130419265
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Entry
130419265 CDS
T09616
Symbol
tncb
Name
(RefSeq) tenascin isoform X1
KO
K06252
tenascin
Organism
tdw
Triplophysa dalaica
Pathway
tdw04510
Focal adhesion
tdw04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
130419265 (tncb)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
130419265 (tncb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
tdw00536
]
130419265 (tncb)
Glycosaminoglycan binding proteins [BR:
tdw00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
130419265 (tncb)
BRITE hierarchy
Motif
Pfam:
fn3
Fibrinogen_C
EGF_Tenascin
EGF_2
EGF
Pur_ac_phosph_N
hEGF
fn3_2
Big_5
Motif
Other DBs
NCBI-GeneID:
130419265
NCBI-ProteinID:
XP_056601837
EnsemblRapid:
ENSTDLG00000020302
LinkDB
All DBs
Position
4:complement(18514265..18558214)
Genome browser
AA seq
1780 aa
AA seq
DB search
MGMQGLPLAFVAVALLVHLSSAGLVKRVIRHRRESLSPTTENLTVPSHDQPVVFNHVYNI
NVPSGSLCSVDLDSPGTTEMKPRSEQSDQHIENTMDGDNQIVFTHRINIPKQACGCDNHL
PDLKDLLNRLDMLEAEVSSLREQCTSGAGCCGAQVAGEVTTKPYCSGRGNYSTDTCSCLC
EPGWKGSNCSEPECPNFCQDQGRCEDGKCVCFDGFGGEDCGIELCPVDCGENGECIDGAC
ICEEGYIGEDCSLTNCPNNCLGRGRCVEDECVCDEPWTGFDCSELICPKDCFDRGRCVNG
TCFCDEGFTGEDCGELTCPKNCNHHGRCVNGQCVCNIGYSGEDCSKLTCLNDCSQRGHCF
NGKCICDPGFEGEDCSVLSCPDNCNDRGQCVEGECICDAGYEGDDCSELSCPNNCHGHGR
CVNGQCICKEGFAGEDCSIKTCPNDCHGHGQCEDGKCVCTEGFTGEDCSIKTCLNDCNER
GLCVDGKCICEEGFTGEDCSIRTCLNDCNDRGLCVDAQCVCEEGFTGEDCSIKTCPNDCQ
GRGQCVDGKCVCHTGFTGDDCSELTCPHNCHNKGLCVNGQCVCHSGFTGEDCGKKTCPNN
CLDHGFCEDGKCVCFEGYTGVDCAELTCPGNCNDQGQCLNGICICDLGFTGEDCSDVSPP
RDLTVTVVDPETVDISWVNEMVVTEYLITYVPTAPGGLEMEMRVSGEKKTATIKELEPGI
EYLISVFAILNGKMSVPVSARIATHLPEPEGLKFKSVKETAVEVEWDPLNIPFDGWNLIF
RNTKEEDGEILNSLTPPETTFEQSGLGPGQEYEVKLEAVKNNTRGPPASKNVVTMIDAPS
QVDVRDVTDSTALITWLQPVAHVDGISMSYGPNKDSSDKKTIELSPMDPQYHLSELHPDT
EYEVSLMARRGEMTSFPIYETFTTDLDPPKHLKTVEETAESITLEWINSKANVPSYRIKY
GPLSGGEHGELVLPSGPQGTTQAKITGLRPGNEYGMGVTAIKDERESMPATTNGVTVLDA
PKELQVTETKETTLMLVWRRPVAKIDYFRLVFVSPDGKKTETEVPGGVNTHTLVNLNPGT
VYTITLIAERGRMKSAPVTLSASTDEEKPQVGNITISNVSWDSFSVSWDVEGKEFDGFLV
EVSDPDGLSDGQNHSLSGQEFNLAATALSPSTFYRVALYGMFKGDLIDPVFAEAVTEAEP
EVEHLLVLDITPHSLKLAWTAPEDVFDAFSIKVIDSNGLGEPHHISVSGNKRTEVVSGLN
EDTEYEIELFGTILGRKFQPILAVARTGLGTPKGISFSDVMDTSATVHWKLPGNQVDSYR
VTYVPIQGGSPLTLRVDGGESQALLQNLTPGVTYQVTVIAVKGLEESEPGSERVTTALDK
PRGLTAVNITDTEALLVWQPCIATVDGYVITYSADNVEPVMDRVSGNTMEFDMSSLTPAT
LYTVKVYAVREAAKSAPTTTEFTTDVDAPQNLAANNIQTESAMLTWQPPRADISGYILSF
ESAGGIIREVVLSPTATFYSLLQLTASTEYTVKLQAIAGPKRSRIISTVFSTTGILYKHP
KDCSQALLNGETTSGLYTIYLRGDESQPLQVYCDMTTDGGGWIVFVRRQSGKVEFFRNWR
NYTAGFGDLNDEFWLGLSNLHKITSNGQYELRVDLKDKDESAYAQYDKFSISEPRSHYKV
HVGGYTGTAGDSMTYHNGRPFSTYDHDKDIAVTNCALSYKGAFWYKNCHRVNIMGRYGDN
SHSKGVNWFHWKGHEHSIEFAEMKMRPANFRNFEGRRKRS
NT seq
5343 nt
NT seq
+upstream
nt +downstream
nt
atggggatgcaaggcctacccctggcctttgtagcggtggccctcctagtccacctttct
agtgcaggcctggtgaaaagagtaattagacatagaagagaatcactgtcaccaaccact
gagaatttgacagtcccaagtcatgatcagcctgtggtcttcaaccatgtatacaatatc
aatgtcccctctggatccctttgctcggtggacttggattcacctggaacaacagaaatg
aagcccagatctgaacaatctgaccagcacatagaaaacaccatggatggggacaatcag
attgtttttacacataggattaacattcccaagcaagcttgtggttgtgataaccatctg
cctgacctgaaggatcttctgaacagactagatatgctggaggcggaggtgtccagtcta
agagagcaatgcacaagtggagcaggctgctgtggtgctcaagttgcaggtgaagtcact
accaaaccctactgcagtggccggggaaactacagcactgacacctgcagctgtctgtgt
gagcctggttggaagggatctaactgctctgagccagaatgcccgaatttctgccaggac
caaggccgatgtgaggatggcaagtgtgtctgctttgatggcttcggtggtgaggactgt
ggaattgagctgtgccctgttgattgtggggagaatggggaatgcattgatggggcttgc
atctgtgaggagggctacatcggcgaggactgcagtttaaccaactgcccgaataactgc
ctcggcagggggcgctgtgtggaagacgaatgcgtttgcgatgagccctggactgggttt
gactgctctgagctcatctgccctaaagactgcttcgatcgtggacgctgtgtcaatgga
acctgcttttgtgatgagggcttcactggggaagactgtggggagcttacctgtcccaaa
aactgcaaccaccatggccggtgtgtgaatggccagtgtgtctgcaacatcggctacagt
ggagaagactgttccaagcttacctgtctcaacgattgcagtcagaggggtcactgtttc
aatggaaagtgtatttgtgaccctgggttcgagggtgaggactgtagtgttctctcctgc
cctgacaattgcaatgacaggggacaatgtgtggaaggtgagtgtatttgtgatgctgga
tatgaaggggacgattgctctgagctttcctgccccaataactgccacggtcacgggcga
tgtgtcaacggccagtgcatttgcaaagagggctttgctggagaagattgcagcatcaag
acctgtcccaatgactgccatgggcatggtcagtgtgaagacggcaaatgcgtctgcaca
gagggcttcaccggagaggactgcagcatcaagacctgtctcaatgactgcaacgagcgt
ggactgtgcgtggatggaaaatgcatttgtgaagagggattcactggagaggactgcagc
atcaggacctgtttgaatgactgcaatgatcgtggactgtgtgtggatgcccaatgcgtt
tgtgaagagggctttactggagaggactgcagcataaagacttgtcccaatgactgccag
ggccgtggacaatgtgtggatgggaaatgtgtttgccacaccggctttactggggatgac
tgcagtgagttgacttgcccccataactgccataacaaaggactttgtgtaaatggccaa
tgtgtgtgtcacagcggcttcaccggagaggactgcggtaaaaagacatgtcccaacaac
tgtctggatcatgggttctgtgaagacggaaagtgtgtgtgctttgaaggctacactggc
gtggattgcgctgagctgacctgcccaggaaactgcaatgaccaaggccaatgtctgaat
ggaatatgcatttgtgatttaggcttcactggcgaggactgctctgatgtctccccaccc
agagacctgactgttactgtagttgacccagaaacagtggacatctcctgggtcaatgag
atggttgtaaccgagtatcttatcacctacgtgccaacggctcctggtggtttggagatg
gaaatgagagtgtctggtgaaaagaagactgcaaccattaaagagcttgagcctggcata
gagtatctaatcagtgtctttgctatcctgaacggcaaaatgagcgttcctgtcagtgcc
agaatagccacacatcttcctgaacccgagggactgaaattcaaatctgtaaaagagaca
gcagtggaggttgagtgggaccccttgaacattccatttgatggctggaaccttatattc
agaaacacaaaagaagaggatggagagattctgaactctctcaccccacctgagaccacc
tttgagcagtctggtcttggacctggtcaagagtatgaggtcaaactggaggctgtaaaa
aacaacacccggggacccccagccagcaaaaacgtagtgacaatgattgacgctcccagc
caggtggatgtacgtgatgtgacagactctacagcccttatcacctggctacagcctgta
gctcatgtggacggtatctccatgtcctatggcccaaacaaagactcctcggacaagaag
acgatcgagctttcccccatggatccccagtaccatttgtctgagctgcatcctgacact
gagtatgaagtgtctctaatggcccgccggggagagatgaccagctttcctatatatgaa
accttcacaacagacctggatccccctaagcatctaaagacagtggaagagacagctgaa
agcattactctggaatggataaacagcaaagccaatgtccccagttatcgcatcaaatac
ggcccactgtctggaggggagcatggagaactggtcctccccagtggcccacaaggcacc
actcaggctaaaatcaccggtctccgacctgggaatgaatacggaatgggggtaaccgct
ataaaggacgaacgtgagagcatgcctgcaacgaccaatggtgtaactgttcttgatgct
cctaaagaactccaagtcactgagaccaaagagaccacactgatgctggtttggaggaga
ccggtggccaagatcgattactttagacttgtgtttgtatcacctgatggcaagaaaacc
gagacggaggtaccgggcggtgtcaatacccacacccttgtgaacctgaacccaggcacg
gtgtacaccatcaccctgattgctgagagaggacgaatgaagagtgctccagtcactctc
tctgcatccacagatgaggagaagcctcaggtggggaacatcaccatctccaacgtatct
tgggacagcttcagcgtgtcatgggacgtggaaggaaaagagtttgatggcttccttgtt
gaagtctctgaccctgatggcctgtcagatggccagaaccacagtctctcaggccaggaa
ttcaacctggctgccacggccctctcccctagtactttctacagggtcgctctttatggc
atgttcaagggagatttaattgaccctgtctttgctgaagccgtcacagaggctgaacct
gaagtggagcatctgctggtcttggacatcaccccacacagcttaaaactggcctggaca
gccccagaagacgtctttgatgcgttttctatcaaagtcattgattcgaatggattaggc
gaacctcaccacatcagtgtgtccggaaataaaaggacagaagtggtttcaggtcttaat
gaagatacggaatacgaaattgagctctttgggaccattttgggacgcaaattccagcct
attttggctgtagctcgaacaggtctgggtacgcccaaagggataagcttttctgacgtg
atggatacatcggctactgttcactggaaattacctggtaaccaagtagacagctaccgg
gtcacctatgtacccattcagggtggcagcccgctgacactgagagtagatggaggagag
tctcaggctttgttgcaaaatctgacccctggtgtgacctaccaggtcactgttattgct
gtgaagggcctggaggagagtgagccaggatctgaaagggtcacaacagccctggataaa
ccacgaggcctgacagctgtcaacatcacagacactgaagctctgctagtgtggcagcct
tgcatcgctactgtggacggatatgttatcacttacagtgcagacaatgtggagccagtg
atggacagggtatcggggaacactatggagtttgatatgagctctctcacacctgccact
ctatacacagtaaaggtctatgcagtcagagaggcagccaagagcgctccaactaccaca
gagtttaccacagatgttgatgctccccagaacctggctgccaataatattcaaacagag
agcgcaatgttaacatggcaaccaccgagagcagacatcagtgggtatatcctcagcttt
gagtctgctggtggcattatcagggaggtagtccttagccccacagcaacattttacagc
ttgttgcagctgactgcctccacagagtacacagtaaaacttcaggccattgctgggcca
aagagaagcagaatcatctctacagtttttagcaccactggaatattgtacaagcacccc
aaagactgctcacaggctctgttaaatggggaaacgacctcaggcttgtacactatttac
ctgcgtggagatgagagccagcccctgcaggtctactgtgatatgaccactgatggaggc
ggatggattgtgtttgttagacgtcagagtggtaaagtggagtttttcagaaactggagg
aactacactgcaggcttcggtgacctgaatgatgaattctggctgggtctctctaacctc
cataagatcacatcaaatggccaatatgaactacgtgtggacctgaaagataaggatgag
tctgcatatgcacaatacgacaagttttcaatctcagaaccacgcagtcactacaaagtc
catgtaggaggatacactggcacagcaggtgactcaatgacttatcacaatggccgccca
ttctccacctacgatcatgacaaggacatagctgtcaccaactgtgctctatcttataag
ggagcattctggtataaaaactgtcatcgagtgaatattatgggccgatatggagacaac
agtcacagcaagggtgtaaactggttccattggaagggccatgagcactccattgagttt
gctgaaatgaagatgaggcccgccaacttcaggaattttgagggaaggagaaagcgatcg
taa
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