Triplophysa dalaica: 130421092
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Entry
130421092 CDS
T09616
Symbol
col7a1l
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-1(VII) chain
Organism
tdw
Triplophysa dalaica
Motif
Pfam:
Collagen
VWA
fn3
VWA_2
Kunitz_BPTI
DUF4992
CBM_4_9
Copine
Motif
Other DBs
NCBI-GeneID:
130421092
NCBI-ProteinID:
XP_056604753
LinkDB
All DBs
Position
5:7211200..7264542
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AA seq
2976 aa
AA seq
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MEFCSVWIFLLFLCLSHQSVSAEAEECRTAQPADIVFLVDDSWSVGPSSFQHIKEFIAHV
IRAFRASVFGQEGIRFGVTVYSDVPRMRIALTDYLTLEEVLRAVEDVPYEGGSSRTGLAL
EFLVESVFSSAIVRDNAPKIAVLITTGQSDDLVDGPATAVADSGISLFAVGVRNADQSEL
MKIVTDPHEEHLMLSPDFSLLENLLPKLSRRICFTASEPPRPIKQNLPVVERIVGPKDLQ
VSALSYNSLKLTWSQATGDVTGYRLLITPVSPKGHLLPAQQKQIDLKGDVGSSLVTGLSP
ETEYSLTVYAIYPGRVGESATIITETTPVPPVANYRVIEEGLFFLRLGWASPPGKVDAYK
IYIPRPDRPRLIYEQMLTGDTSSHVIDALEEDKNYTVSIYAMYPEGTSESVSVTGRTLKL
IAVKQLLVQNATTDTVQARWTSVRGARGYRLTWSSAEGHIENVNLGNNFNFYMVQGLHAG
TEYTVTINPIFVDIEGPLTIAKAKTLESSTVQTLRATAVSTSSAVISWNSVPGATGYRLA
WGPTAEFTGRDRPRQLALNSSTTEYILKNLVHDTEYVLSLYVLFGSVVGPGITATFRTSP
LGYVSNFKVTSYTSSSIDVEWSPIVGATEYKLTWSSELVRPQSRYLDRSALSHSISGLQA
NTVYSISIYALYSNTEGPEITLSQQTAFISDSEVIEAVREVKVVDIGASSFTLGWRKTPG
VTGYKITWSPFHGGVKKSEVVSSSTTSFTITGLPASSAYKIQVSGMVRGKEGSPVMVTPR
TLDLPKVTGFSALNTTDNSTVLNWTSVAGVSGYLLSWRHISEVVISSELLSSTFTSYKVR
ELQYGRTYIFSIRPLYGEVEGPVTTITKRILGVPRLIPVHSPTPAHVSAHSNYNDVHLTT
SRTPVAKAPSAPTTTQKPATRPQVTVGQMPQSLTRMTTANERTTLSVETPPPGPVCGRGK
ADIAFLVDESSSIGSNNFAKLKDFLFRIVTYFPSVGPKGTQIAVVHYSDQPRIEFNLKTH
KDRNSVLRALREVRYGGGNTKTGRGISYVLRELFQESLGMRQEAPHVLVLLTDGRAQDDV
EPPSRIAHALGVSVLAIGIGQADIEELRTIASPTTYKNIFFATDFDDLPTIERELISTLC
SEALQSEFKQHDESAQLDTPTSDPEPLPKPEGPCPLNCRGQKGEKGDGFGLGGLRLKQSP
GHYDSFSLKSKGEKGERGLPGIDGIPGLPGRPGRTGPPGSQGQRGPTGTSGDMGPAGHTG
PKGQRGERGEPGYVIGAGMEVIPGRKGEPGSSGPSGPPGVPGVSGPPGLPGQPGFLGPPG
ISVKGESGEPGLKGPRGKPGPKGEKGEQGYNGLAGLPGPVGVDGVPGLPGQKGGKGENGI
GIQGAQGPPGPAGEKGYTGLQGPKGEPGIQGPQGLIGPRGKRSPKGDQGVKGERGETGPV
GPTGIAGLPGAAGPKGDEGQHGAPGDPAKGILGPPGKKGARGDVGPVGPLGTQGTKGEQG
DKGEKGNPGFGIPGQSGPKGESGERGNVGLSGKPGPKGNDGSKGDKGETGLPGNSGTPGL
RGKDGLPGTKGEMGSRGEPGSLGEPGDRGTKGPLGLPGRPGDTGEKGESGKLGLPGPEGH
KGEKGEPGKPGPPGGSPLTMSDNTILTRAIKGEPGEPGLTGQPGQPGPEGKPGPPGNSLL
GSGTGQDGLDGLPGRSGSKGEPGQKGEPGSNGEKGDPGRAGITGMPGLPGTPGKPGVDGK
RGVAGKDGERGLKGDEGGKGGKGEPGANGNEGKKGETGSPGLPGPPIVLQEGMSIEDIKK
VFPIPMGPPGPTGPPGMKGEKGENGMNGDKGDAGPPGRAVEIKDIEALFDSYGIKLSLLK
VLIDRLLQDGMEELLHDISTNKRVKGERQEPDSNIITEYTSSVKYSHAHESIPTVDVSTE
ESDLDEGQIPEPSPEPVVEIDVAPTLLSHFYPTHSKTNLSKIKDTLAENEESATVENNFH
NVTSSKFSHSNTSSERVDHGKPEVGMETVLNSHDDTGKMASGEKKKGREKGKGKGNKGRQ
KRQRKRLQDQDNVEEDVEEATYDEEYGAEYEDEMPSVDPFNAQEQEKTEELEISTTALYT
QENEGEIEARPLEQSPEEITPTAFATTASALISSGVAEQKHADSIALSVLNTTQTEEEGN
LSKSSGLAQARSKTRRSVPWPDPMAYMPGTAGGQGRYKQGHRRSTSGARGKNNLNKKKQE
NKAPEPVAETYREGEADVYLKNKAEWDERQGDMEEEDTVTENREYGSGDGDDETGSEETE
EDFEMERERERLEMEREKVALERTEELERERERERELDQEEKEERERQLQRQRIEWERQR
EKMERERMGEIDREDDIPNCDYLKGPPGENGKLGPKGEIGENGQKGEPGTGHRGPIGQAG
PPGLKGEPGEPGPPGAQGIQGXRGNPGIPGSPGQRGQPGDHGEAGKKGERGRRGKNGSPG
SPGKSGPSGQQGPPGPPGSKGDKGDSIPGETGDRGISGIPGRRGPKGTDGSKGPVGLMGP
KGLGGVKGEKGDKGVTGNRGDKGSPLSMPGPRGFKGLKGGPGESGLPGFDGDKGEKGEDG
PPGAKGLKGEAGTKGAMGPFGARGPVGQKGDPGEPGVNGEKGRNGENGVDGETGEKGDMG
LQGQKGDKGGRGDPGLPGDTGIKGEKGFRGFAGRTGSPGLDGAQGDPGDPGALGIPGLNG
IPGRKGEKGNSGVNGLDGAPGQRGDKGATGFPGFAGFKGSAGLFGADGSPGLAGPVGPKG
EVGPKGEKGKRGRGKACQRGPPGIPGLRGLDGLEGTLGMKGDKGEPGLSVEDVKELVTKE
VVEKCGKDFLLMVNTNDPDDGSILRDEISAHPFMHTLPKEWAEDMEDETTPVHPAVSDVE
PTLTYGNITRANAERDGEGTKRRHSLKVHAEPAADPCLEPMSEGICTEYVLLWYYYANSG
ECRPFVYGGCGGNRNRFGSKQDCQNRCVLGRRDFGS
NT seq
8931 nt
NT seq
+upstream
nt +downstream
nt
atggaattttgcagcgtgtggatcttcctcttgttcctgtgtctctctcatcaaagcgtc
tctgcggaagctgaagaatgtcgcacagcccagcctgcagatattgtgttcctggtggat
gattcctggtcagtgggtccatccagcttccagcatatcaaagagtttatagcacacgtc
atcagagctttccgggccagtgtgtttggacaggagggcattcgctttggagtgaccgtc
tattcagacgtgcccaggatgcgcatagctttgacggattacttgactttggaggaagtg
ctaagggccgtggaggatgtgccgtatgagggaggaagcagtcgcacgggtctggcattg
gagtttctggtagaatctgtcttcagttccgccatcgtcagagacaatgccccaaagatt
gctgttttgatcactactggtcagtcagatgatctggtcgatggtccggctacagcagta
gcagacagtgggatttccctgtttgctgtgggggtgaggaacgctgatcagtcagaactg
atgaaaatcgtcacagatcctcacgaggaacatctgatgctcagcccagatttttctttg
cttgagaacctccttcccaaactctctcgtcgcatctgcttcacagcttcagaacctcct
cgacccatcaaacaaaacctgccagtggtggagagaatcgtaggtcctaaagatctgcag
gtgagcgcattgagctataactctctaaagctgacctggagtcaggccacaggagatgta
accggctacaggctgctcatcacccccgtgtctccgaaaggccatctgctcccagcacag
cagaaacagattgatttgaaaggagatgttggtagtagtctggtaactgggttgagtcct
gaaacagagtactctctaactgtgtatgccatctaccctggacgtgttggcgagtctgct
actattatcacagaaacaactcctgtgccgcctgttgcaaactatcgtgtgattgaagaa
ggactgttcttcttacgcctgggctgggcatcaccgcctggaaaagtagatgcctataaa
atctacattccaagaccggacagaccacggctcatttatgagcagatgctgacgggcgac
acctcctctcatgtgattgacgcattagaagaggataaaaactacacggttagcatctac
gccatgtatccagagggcaccagtgagtctgtgtcggtcacaggaagaactttgaaactg
attgctgttaagcaactactggttcagaatgccactacagatacggtccaggcccgctgg
acatctgtcagaggggccaggggctacagactcacctggtcatcagcagaggggcacatt
gagaatgtaaatctggggaacaacttcaatttctacatggtgcaaggcctacatgctgga
acagagtacacggtaaccatcaacccaatctttgtggacattgaagggcctcttaccatt
gccaaagccaagacattggaaagcagtacagtacaaaccctgagggccacggcggtgagc
acaagcagcgctgttatctcatggaactctgtgcccggggccaccggctacagactggca
tggggacctactgcagagtttacaggcagagatcgacccaggcagttggccctgaacagc
agcactactgaatatattctgaagaatctggtccatgacacagagtatgttctgtctctg
tatgtgcttttcggttctgtagtcggacccggcatcacagctacattcaggacctctcct
cttggatacgtgtcaaattttaaagtgacatcatacaccagctcctccatcgatgtggag
tggagcccaattgttggggcaacagagtacaaactcacctggagttcagaactggtgcgt
ccccagagccggtatcttgaccgcagcgctttgagtcacagcatatctggtcttcaggca
aacactgtttattctatcagcatttacgctctctacagcaacacagaagggccagaaatc
accctttcacagcaaacagcatttatttcagactctgaggtgattgaggcagttcgcgag
gtgaaggtggtggacatcggtgccagctccttcacactgggctggaggaaaacgccaggg
gtcactggatacaagatcacctggagccccttccatggtggagtaaagaagagtgaggtt
gtatcttcttctactacatctttcaccattactggtcttcctgctagctccgcctacaag
atccaggtgtctggaatggtgagaggcaaagaaggaagtccagtcatggtgaccccccgc
actttggatctgcctaaagtcactggatttagtgctctgaacaccacagacaacagcact
gtactgaactggaccagtgtggccggagtctccgggtatctgctgtcctggagacacatt
tcagaggtggtgatctcctccgagctcctcagctccacttttacctcctacaaggtcaga
gagctccagtatgggagaacctacatcttttccatcagaccgctttatggagaagtggag
ggtccggtcacaaccatcacaaagaggatcttgggggttcctcgtctcattcctgtgcat
agccccacacctgctcatgtctcagctcatagcaactacaatgatgtccatcttacaacc
agccgaacacctgttgccaaagcccccagcgcacccactaccactcagaaacctgcaacg
aggcctcaggtcaccgtaggccagatgccccaatcactgaccagaatgaccacagcaaat
gaaagaaccaccctgtctgtagagactccgcctcctggtccggtttgtggcagggggaag
gcagacattgcttttttggtcgatgaatcctcaagtattggttccaataatttcgccaag
ctgaaggacttcctgttcagaatcgtcacctacttcccctctgtaggacctaaaggaaca
cagatagcagtagttcactacagcgatcagcccagaatcgagttcaacctgaagactcac
aaagatcgcaactcggttttgagagcgctcagagaagttcgctatggaggggggaataca
aaaacaggtcgtgggatcagctatgtcctcagggagctgtttcaggagtctttgggaatg
aggcaggaagctcctcacgtgttagttttgctgaccgacgggagagcgcaggatgatgta
gagccaccttcccgcatagcacacgccttgggtgtcagcgtgctggccattggaatcggt
caagcggatattgaggaactgaggacgatcgcttcccccaccacctacaagaacatcttc
ttcgccactgactttgatgatctgcccaccatcgagagagagttgatcagcaccctctgt
agtgaagctttacaatcagagttcaaacagcatgatgagtctgctcaactagacacacct
acgagcgacccagagcctcttcctaaaccagaagggccctgtccgctcaactgcaggggt
cagaaaggagaaaagggcgatggatttggtcttggtggcctgcgcttgaagcaaagccca
gggcattatgactcattcagtctaaaatcaaaaggagagaagggtgagcggggtcttccc
ggaatcgatggcatccccgggttaccaggtcgaccgggtagaactggaccccctggctct
caagggcaaaggggaccaactggaacttctggtgacatgggacctgctggtcatactgga
ccaaaaggacagagaggagagagaggtgagccaggatatgtcataggagcaggcatggag
gttattccaggacgtaaaggagaacctggatcttctgggccttcgggtcctcctggtgtc
ccaggggtatcaggtccccctgggctgccgggtcaacctgggttcttggggcctcctgga
atctccgtcaagggggagtctggtgaacccggtctcaaaggtccacgtgggaaaccaggt
cccaaaggagaaaagggagagcagggatataatggtctagctggtttgccaggaccagtg
ggtgtggatggagtcccaggactgcctggtcagaagggtgggaagggagagaacggtatc
ggaattcaaggcgctcagggtccacctgggccagctggagagaagggttatactggacta
caaggcccaaagggtgaacctggaatccaaggtccacagggactcataggccctcggggg
aaaagaagtcctaaaggagatcaaggagtcaagggtgaacgtggggagacagggccagtc
gggcctacaggaattgcaggcttacctggagctgctggaccaaagggagacgaggggcag
catggtgctcccggtgacccagcgaaagggattctcggtcctccggggaagaagggcgca
aggggtgacgtcgggcctgtcgggccacttggaactcaaggaactaaaggagagcaggga
gataaaggtgaaaagggcaaccctgggtttggaatccctggtcaatctggccctaaagga
gaaagtggagaaagaggaaatgttggattatcaggaaaaccaggacctaaaggcaatgat
ggttccaaaggagacaagggggaaacgggtctccctggcaactctggaactccaggacta
agaggtaaagatggcttgccaggaacaaaaggggagatgggatcgaggggggagcctggt
tcactaggagagcccggagacaggggaaccaagggccctctcggtcttccaggacgacca
ggagacactggtgagaaaggagagtctggaaaattagggttaccgggtcctgagggacac
aaaggagagaagggtgagccgggaaagccaggaccaccaggaggttctccgttgaccatg
tcagacaataccatccttacaagggctattaagggtgaaccgggtgagccagggctcaca
ggccaacctggacaacctggtcctgaaggcaaacccggaccaccaggaaattcactattg
ggatctggtacaggacaagatggtctggatggtctaccaggacggtctggatctaagggt
gaaccaggacagaaaggagaacctgggtcgaacggagagaagggagatcctggacgagct
gggattactggaatgcctggtttacctggaacacctggcaaacctggtgtggatggaaag
cgaggggtagctggaaaagatggagaacgaggactaaagggcgacgaagggggaaagggg
gggaaaggtgaacctggtgcaaatggaaacgaaggtaaaaaaggagagaccggatcccca
ggcttgccaggtcctcccattgtgctccaagagggtatgtcgatagaagacataaaaaag
gtgtttcccataccaatgggaccccctggaccaacgggtccccctggaatgaagggagag
aaaggagagaacggtatgaatggagataagggggacgctggcccaccagggagagctgtg
gaaataaaggacattgaagctttgtttgattcatatggcattaaactctcgctgctgaag
gttttgattgacagactgcttcaagacggtatggaggagcttcttcatgacatcagcacc
aacaagagagtgaaaggagagcgacaggaacccgattccaacatcatcaccgaatacact
agctcagtaaagtacagtcacgctcatgaatcaatacctactgtggatgtgagtacagaa
gagtctgatctggatgaggggcagattcctgaacccagtcccgaaccagtggttgaaata
gatgtggctcctacccttctctcccacttctatcccacccacagtaagactaacctgagc
aaaataaaagacacgctggcagagaatgaggaaagcgcaacagttgagaacaactttcat
aatgttacatcttccaaattttcccattccaacacttcctccgagagggtggatcatggt
aaaccagaggtaggtatggagacagttttaaacagccatgatgacacaggaaagatggct
tctggagaaaagaagaaaggcagagaaaaaggaaagggcaaaggaaacaaaggacgtcaa
aaacggcaaaggaagcgtttgcaagaccaagacaacgtggaagaggacgtcgaggaggca
acatatgatgaagaatatggtgctgagtatgaggatgagatgccatcagtagacccgttt
aatgctcaagagcaggagaaaacagaggagctggaaatctctacaacagctctatataca
caagaaaatgagggagagatagaagcacgtccactagaacaatctccagaggaaattaca
cctactgctttcgcaacaacagcgagtgctctgatttcatccggagttgcagaacagaag
cacgctgattctatagcattgtcagtgttaaatacaacacaaactgaagaggaggggaac
ttgtccaaaagtagtggcctggcacaggcaaggtctaaaacgagaaggagtgtcccctgg
ccagatcccatggcctacatgcctggaacagcaggaggacaagggcgttacaagcaaggg
cacaggcggtcaacctctggtgcgagaggaaaaaataaccttaataaaaagaagcaagaa
aacaaagcacccgaacctgtggcagagacttacagagagggagaggcagatgtctatctt
aagaacaaagcagaatgggatgagagacagggagatatggaagaagaggatacagtgact
gaaaacagagaatatggttcaggtgatggcgatgatgaaacgggcagcgaggaaaccgag
gaagactttgagatggaaagggagagggagagattagagatggagagggaaaaggtggcg
ctggaacgaacggaagaactggaaagagaaagagaacgggagagagagctggatcaagag
gaaaaggaagagagggagagacagttacagaggcaaagaatagaatgggaaaggcaaaga
gagaaaatggagagagagaggatgggcgagatagacagagaggacgacattcccaattgt
gattatctgaagggacctccaggtgaaaatggaaaactgggccctaagggtgagattggg
gaaaacggccagaagggcgagccaggaactggacatcgtggacccatcggtcaagcaggt
ccaccaggactaaagggtgaacctggggaaccaggaccacctggagctcagggcatccaa
ggtnatcgtggcaaccctggcatccctgggtcaccaggtcaaagaggccagccaggtgac
catggagaagcgggtaaaaagggagaaagaggaagaagaggtaaaaatggctcacctggc
tctccaggaaaatctggtccttcaggacagcagggtccacctggccctccagggagtaaa
ggtgataagggtgacagtatccctggagaaaccggtgacagaggaatttctgggatccca
ggtcgcaggggaccgaaaggcactgatggttctaaaggtccagtgggtctgatgggtcct
aaaggcctcggtggcgtgaaaggagaaaagggtgacaaaggtgtcactggtaacagagga
gacaagggtagcccactttccatgccaggcccccgaggatttaaaggccttaaaggagga
ccaggtgagagcgggcttccaggatttgatggagataaaggagaaaagggggaagatgga
ccacctggtgcgaagggactgaaaggtgaggccggtaccaaaggagccatggggcctttc
ggtgcacgtggtcccgtgggacaaaagggggatccgggggagcccggcgtcaacggggaa
aagggtcgaaacggagagaacggagtggatggtgaaacaggtgaaaagggagacatgggc
ctgcaaggtcaaaagggggataagggtgggagaggggatcctggtttacctggagataca
gggattaaaggagagaagggcttcagaggtttcgctggtcgtactggtagcccaggactg
gatggagcacagggtgatcccggggaccctggggcacttggcattcctggtctgaatggt
atcccaggacgaaagggagaaaaaggcaatagtggtgtgaatggccttgatggagctcct
gggcaaagaggagataagggggcgactggatttccaggtttcgctgggtttaagggatcc
gctggcttgtttggagctgacggttctccggggctggctggtccagttggacccaaagga
gaagtaggaccgaagggagaaaagggaaagcgaggcagaggaaaggcctgtcaaagggga
ccccctggaattcctggtctcagaggcctggatgggttagagggaaccttgggcatgaag
ggagacaaaggcgagccaggactcagtgtggaagatgtgaaggaactagtgacaaaagag
gtggttgagaagtgtggtaaggattttctcctaatggtgaatacaaacgatccagacgat
ggtagcatcctgagagatgagatatctgcccatcctttcatgcacaccctcccgaaagag
tgggctgaagatatggaagatgaaaccaccccagttcatcccgctgtttctgatgtagag
ccaacgttgacatatggtaacattacaagggccaacgctgagagagatggagaaggaact
aagaggagacattcactcaaagtccacgcagaaccggccgctgatccgtgccttgaaccc
atgtctgagggaatctgcactgagtacgtcctgctctggtactactatgcaaattcggga
gagtgtcgaccctttgtgtacggcggctgtggaggaaatagaaatcgcttcggctccaaa
caggactgtcagaatcgatgtgttctgggcaggagagattttggatcctga
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