Triplophysa dalaica: 130432491
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Entry
130432491 CDS
T09616
Symbol
cnot3a
Name
(RefSeq) CCR4-NOT transcription complex subunit 3a isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
tdw
Triplophysa dalaica
Pathway
tdw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
130432491 (cnot3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tdw03019
]
130432491 (cnot3a)
Messenger RNA biogenesis [BR:
tdw03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
130432491 (cnot3a)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
130432491 (cnot3a)
BRITE hierarchy
Motif
Pfam:
Not3
NOT2_3_5_C
DUF4407
Motif
Other DBs
NCBI-GeneID:
130432491
NCBI-ProteinID:
XP_056617844
EnsemblRapid:
ENSTDLG00000013935
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All DBs
Position
12:4313267..4321000
Genome browser
AA seq
897 aa
AA seq
DB search
MADKRKLQGEIDRCLKKVAEGVEQFEDIWKKVEGLHLLHNAANANQKEKYEADLKKEIKK
LQRLRDQIKTWVASNEIKDKRQLVDNRKLIETQMERFKVVERETKTKAYSKEGLGLAQKV
DPAQKEKEETELWLTNTIDNLNMQVDQFESEVESLSVQTRKKKGDKEKQDRIEELKRLIE
RHRYHIRMLETILRMLDNDSIQVDSIQKIKDDVEYYIDSSQDPDFEENEFLYDDLDLEDI
PATLMATSPQGLMEDDMFLQSSSTPTSTTSSSPIPPSPATGNMENSEDKRGRSTDSEVSQ
SPVKNGNPSLSSFSSSASSGSSGSSSSSLVSMATVVGGCTAVSGGISLLGSFSSAVQQHT
PQQQAQVKLSSSSAPSNNTPSPPSHPTLPTSTYSSLPSSSTPGMITSSSQSSSDSGGSSH
GLGLGLGKGGVTVTSCSQMPSLGMTGLSVSLNTMAGLLSGSTPAPYAQAAAGGTASSASS
GPVGNSSGSTSISVTSGGGASSGATSNGTGTGGALGLLGSNPGHGPLSGGILNLVPGQTS
LQGSAQVPVSPVSTAPGGGTSEGGLGGNGGSAVGTNVGTNVAPPRPPSGLKQNGATSYSA
VVADNTPDSSLSSGSQSQHSHSSSSSSSSNQNLDNGPSLLSSITLPPSSPSPAFTDSSPG
GGSLLNGPHSYTPNTEAIKAPEPPSSLKAMAERAALGLALDGEIPSLHLTDRDLFSGSSA
PPGPTTAPQPAVSEVNLPPSLGACPLGPTPLTKEQLYQQAMQEAAWTHMPHPSDSERIRQ
YLMRNPCPTPPFHHQVPPHHSDSIEFYQRLSTETLFFIFYYLEGTKAQYLSAKALKKQSW
RFHTKYMMWFQRHEEPKTITDEFEQGTYIYFDYEKWGQRKKEGFTFEYRYLEDRDLQ
NT seq
2694 nt
NT seq
+upstream
nt +downstream
nt
atggctgacaagagaaaacttcaaggtgaaatagatcgatgtttgaaaaaagtcgctgaa
ggcgtggaacagtttgaagacatttggaaaaaggtggaaggcttacatctgcttcacaat
gcagcgaatgccaatcagaaggagaagtatgaggcagatctcaagaaagagattaaaaag
ctccagcgactacgagaccagattaaaacgtgggttgcatccaatgagatcaaagacaaa
cgacagctagtggataaccgcaagctaattgaaacgcaaatggaacgtttcaaggtggtt
gaaagagaaaccaagacaaaggcctattctaaagaggggctgggcttggcccagaaagtg
gacccagcacagaaggaaaaggaggaaacggaactgtggctcacgaatacaatagacaat
ttaaacatgcaggtggaccagtttgaaagtgaagtcgagtcgctgtctgttcaaactcga
aagaagaaaggagacaaggagaagcaggatcggatcgaggagctaaagaggttaattgag
aggcaccggtatcacattagaatgctggagaccattttgaggatgttggacaatgattcg
attcaggtggattctattcaaaagatcaaagatgatgtggagtactacattgactcttcc
caagacccggactttgaggagaacgagttcctctatgatgacttagacttggaagatata
ccggcaaccttgatggccacgtctcctcagggcctaatggaagatgacatgttccttcag
tccagcagcaccccgacctccaccacttcctcttctcctatccctccatctccagccaca
ggcaacatggagaattcagaagataaaagaggtcgatcgacagacagtgaagtcagtcag
tctcctgtgaagaacggcaacccatctctctcgtccttctcctcgtccgcctcctcaggc
tcctcaggctcctcctcctcttctctggtctccatggctactgttgtcgggggctgcaca
gcggtctccgggggaatcagcctgctgggcagttttagcagtgcagtacagcagcatact
cctcaacaacaagcacaggtcaaactctcctcgtcatccgcaccctcaaacaacacgcct
agcccgcccagccatcccacactacccacctctacttattcttcactgcccagttccagc
acacctggcatgattacttccagctcccagtcttcgtcagattcagggggctccagtcac
ggattggggttaggtcttggaaaaggcggcgtgacggtgaccagctgcagtcagatgcca
agtttgggcatgacagggttgtctgtttcgctcaacacaatggcagggcttctctcaggc
tctaccccggccccctacgcccaggcggctgcgggtggaacggcgagtagtgcctctagt
ggtccagtggggaatagcagcggtagtacaagcatatctgtgacaagcggaggaggagcg
agctcgggtgcgaccagtaacggtacgggtacagggggagctttgggcctgttagggtcc
aatcctggtcatgggcctctaagcggagggattttgaacctggtacccgggcagacgtct
cttcaggggtctgcgcaggtaccggtgagcccggtgagcacagcacctggaggaggaacc
agcgagggtgggctgggcggtaatggaggcagcgcggtgggaacaaacgtggggacgaac
gtagcacctccaagacccccaagcggcctgaaacaaaatggagcaaccagttacagtgcg
gtggttgcagacaacacaccagactcctccctcagcagtggcagccaatcacaacacagc
cattcctcctcctcaagctcgtcatcaaatcaaaatctggataatggtccaagtttattg
agctctatcactctacccccctcctccccatcacctgctttcactgacagctcacctggt
ggtgggagtctgttaaatggcccacactcctacacacccaacacagaagctatcaaggcc
ccagaaccaccaagctctttgaaagcaatggcagagagagcagcactaggattggcactg
gatggagaaatcccatcattacacctcacagatcgagatctgttctcgggatcctcagcc
ccacctggtcccacaacggccccccagcctgctgtttcagaagtcaaccttccgccatct
ttaggggcatgtccgttaggccccacccctctcactaaagaacagctgtaccaacaggcc
atgcaggaggcagcatggacacacatgccccacccatcagactctgagagaatcaggcaa
tacctgatgagaaatccttgccctacaccaccattccaccaccaggtgcccccacaccat
tcggactctattgagttctaccagagattgtccacagagactctcttcttcatattctac
taccttgagggcacaaaggcacagtatctgtcagcaaaagcactgaagaagcaatcgtgg
agattccacacgaagtacatgatgtggtttcagaggcatgaggaacccaagaccatcact
gatgaatttgaacagggcacgtacatttactttgactatgaaaagtggggccagagaaaa
aaggaaggatttactttcgagtacagatacctagaggacagagatttacaatga
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