Tepidibacter aestuarii: T8CH_0124
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Entry
T8CH_0124 CDS
T08095
Symbol
recD2
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
teb
Tepidibacter aestuarii
Pathway
teb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
teb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
T8CH_0124 (recD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
teb03400
]
T8CH_0124 (recD2)
Enzymes [BR:
teb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
T8CH_0124 (recD2)
DNA repair and recombination proteins [BR:
teb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
T8CH_0124 (recD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_4
SH3_13
UvrD_C_2
Viral_helicase1
HHH_5
AAA_11
PIF1
HHH
T2SSE
Helicase_RecD
AAA_22
HHH_2
HHH_8
SLFN-g3_helicase
ATPase_2
UvrD-helicase
nSTAND3
AAA
HHH_3
UvrD_C
PhoH
DEAD
SRP54
Rad17
AAA_28
AAA_14
AAA_24
DNA_pol_lambd_f
AAA_16
RsgA_GTPase
ATP_bind_1
ABC_tran
AAA_5
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
CAH2211874
LinkDB
All DBs
Position
T8CH:125746..127968
Genome browser
AA seq
740 aa
AA seq
DB search
MEKIKGMVVEIVFKNDDNGYTVAALEHSNDEVTIVGCMPTITVGETIEVDGKWINHKMYG
PQFEVSSFIPCTPESEEGIYIYLSSGMIKGIGPKMARKIVEIFGLNTLDVIQMNPEKLTS
VDGIGKKKAETIGKSFQDNRELRNLIISLSKYGITPNYCLKIYKKYKNKSIQIVETNPYK
LAEDIRGIGFKLADNIATKMGIDPYSKDRIAQGIIYTLTQSLSEGHTYLPKSKLLKESSK
LLEIEVEYIKDVIFKLALDQKIQIEKGPIEDNIYLIPYYISENGVCKKLIELSQYEFDDL
KLDINEEISLIEKEDDITLAKNQKEAVIQALQKGVLVVTGGPGTGKTTTINTIIKIFENL
KMNIYLAAPTGRAAKRMSETTGKESKTIHRLLEMGYSSEDEEMVFMKGEDDQLDADVVII
DEVSMVDILLMYNLLKAIKAGTRVILVGDSDQLPSVGAGNVLKDIIDSNIIEVVKLDEIF
RQAKESMIVVNAHKINKGEKLELNAKGKDFYFIPKYEKEDILKEIVNLAYKRLPDYYKID
NLKDIQILSPMRKGDTGVFNLNLYLQNVLNPNDKFKVEEKFQKRTFRVGDKVMQIKNNYT
KKWKNEDETKDGEGVYNGDIGYIYHIDKEEKVVYILFDEYKIAQYDYNELDEIDHSFCTT
IHKSQGSEFPVVIMPITWAPPMLLTRNLLYTAVTRAKKLVVLVGDVKYLEYMIKNNKIYD
RHSNLNIKLSRFKEEGLLIE
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaataaagggaatggtagttgagattgtatttaaaaacgatgataatggatat
acagtagccgcccttgaacactcaaatgatgaagttactatagtaggatgtatgccaact
ataacagtaggtgaaactattgaagttgatggcaaatggataaatcataagatgtatgga
cctcaatttgaagtgagttcatttattccttgcacacctgaatctgaggaaggaatatat
atatatttatcatctggaatgataaaggggataggtcctaagatggctagaaaaatagta
gagatatttggactaaacacactggatgtaatacaaatgaatcctgaaaaactaaccagt
gtggatggaataggaaagaagaaggcagagacaataggaaagagctttcaagataataga
gaacttagaaacttgataataagtttatcaaagtacggaataactcctaattactgtctt
aaaatatataaaaaatataaaaacaaatctattcagatagtggagacaaacccatataaa
ctagcggaagatataagaggtataggatttaagcttgctgataatatagcaacaaaaatg
ggtatagatccttattcaaaagatagaatagcacaaggtataatatatacactaactcaa
agtttaagcgagggacatacgtacttacctaaaagtaagcttttaaaagaatcttctaaa
ttactcgaaatagaagttgaatatataaaagatgttatatttaaacttgcactcgatcaa
aaaattcaaatagaaaagggacctatagaagataacatatatttgattccatattacata
tctgaaaacggagtctgtaagaaattaatagagctttctcaatatgaattcgacgatttg
aaattagatataaatgaagaaatatctttaatagaaaaagaagatgatataactcttgca
aaaaatcaaaaggaagcagtaatacaagcgctgcaaaaaggggttttggtagtaactgga
ggtcctggaactggaaagaccactacaataaatactataataaagatatttgaaaattta
aaaatgaatatatatttagcagcaccaactggaagagctgcaaagagaatgagcgaaaca
acgggaaaagaatctaagactatacatagattacttgaaatgggatactcatcagaagat
gaagaaatggtatttatgaagggggaagacgaccaacttgatgcagatgttgttataata
gatgaggtatctatggtagatatcttactcatgtataatcttcttaaggctataaaggct
ggaaccagagtaatattggttggtgattcagatcaacttccatcagttggagctggaaat
gtattaaaggatataatagattctaatataatagaggttgtaaaacttgatgaaatattt
agacaagcaaaagagagtatgatagtagtcaatgcgcataaaataaacaaaggtgaaaaa
ctagaacttaacgccaagggcaaggatttttactttattccaaagtatgaaaaagaagac
atattaaaagaaatagtaaatctagcatataaaaggcttccggattactacaaaatagat
aatctgaaggatatacaaatattatctcctatgagaaagggagatactggagtatttaat
ttgaatttatatcttcaaaatgttctaaatccaaacgataaatttaaagtagaagaaaag
tttcaaaagaggacatttagagtaggcgataaagtgatgcaaataaaaaataattataca
aagaagtggaaaaatgaggacgagacaaaagatggtgaaggggtatataatggagatata
ggatatatataccatatagacaaagaagaaaaagtagtatatatactatttgatgaatat
aaaattgcgcaatacgattataacgaactcgatgaaatagaccacagcttttgtactact
atacataaaagtcaggggagtgaatttcctgtagtaataatgcctataacatgggctcct
ccaatgcttttaactagaaatcttttatacacagctgttacaagggctaaaaaactagta
gttttagtgggggatgttaaatatttagaatatatgataaaaaataataaaatatacgat
agacactcaaaccttaatatcaaactttcaagatttaaagaggaagggctattaatagaa
tga
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