Terrabacter sp. C0L_2: U5C87_08875
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Entry
U5C87_08875 CDS
T09725
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
ted
Terrabacter sp. C0L_2
Pathway
ted03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
ted00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
U5C87_08875
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ted03400
]
U5C87_08875
DNA repair and recombination proteins [BR:
ted03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
U5C87_08875
BRITE hierarchy
Motif
Pfam:
Ku
HC2
Motif
Other DBs
NCBI-ProteinID:
WVM98464
LinkDB
All DBs
Position
complement(1908417..1909382)
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AA seq
321 aa
AA seq
DB search
MRAIWKGAVSFGLVNVPVRLFSATENHDVQFRQVHEKDGGRIKYQRVCSIDGEEVPYSDI
AKGYEAADGQMVVLTDEDLKSLPTRSTKEISIEKFVPSEQIDPLLFDKSYYLEPDKTGLK
PYVLLRDALEKADRMALVTVSVRTRMTLAVLRVRDGVIVLQTLLWADEVRTPEFESLSEE
THATAKELAMASSLVDSLSGDYEPDEFEDDYAEAVTQLVATKIEGGELTETPEAKGEETE
VVDLLAALQRSVDKAKAAKTGGSPSDSGSSDEGAAKKTASKPAPKTTAKKATTKTAAKKA
TAKKTTAKKSTTKKAATKKAS
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgcgagccatctggaaaggcgccgtgtcgttcggcctcgtcaatgtgccggtccgactc
ttctcggcgacggagaaccacgacgtgcagttccggcaggttcacgagaaggacggcggc
cgcatcaagtaccaacgcgtctgctcgatcgacggcgaggaggtcccctactccgacatc
gccaagggatatgaggctgccgacggacagatggtcgtgctgaccgacgaggatctcaag
agtcttccgacgcggtcgaccaaggagatctccatcgagaagttcgtgccgtccgaacag
atcgacccgttgcttttcgacaagagctactacctcgagcccgacaagaccgggctcaag
ccctatgtgctgctccgcgacgcgctcgagaaggccgaccggatggcgctcgtcaccgtc
tcggtgcgcacccggatgaccctcgccgtgctccgcgtccgtgacggcgtcatcgtgctc
cagacgctgctctgggccgacgaggtgcgcacgccggagttcgagtcgctctcggaggag
acgcacgcgacggccaaggagctcgcgatggcctcctcgctcgtcgactcgctgtcgggc
gactacgagccggacgagttcgaggacgactacgccgaggccgtgacccagctcgtcgcg
acgaagatcgagggcggcgagctcaccgagacgcccgaggccaagggcgaggagaccgag
gtcgtcgacctgctcgcggccctgcagcgcagcgtcgacaaggccaaggccgccaagacg
ggcggctcgccgagcgactccggatcgtcggacgagggcgcggcgaagaagacggcgtcc
aagcctgcacccaagaccacggccaagaaggcgacgacgaagaccgccgcgaagaaggcc
acggcgaagaagaccacggccaagaagtcgacgacgaagaaggcggcgaccaagaaggcg
agctga
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