Nostocoides sp. HKS02: GKE56_06015 Help Entry GKE56_06015       CDS       T06295                                  Name (GenBank) ATP-dependent DNA ligase   KO K01971   bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] Organism teh  Nostocoides sp. HKS02 Pathway teh03450   Non-homologous end-joining Brite KEGG Orthology (KO) [BR:teh00001]  09120 Genetic Information Processing   09124 Replication and repair    03450 Non-homologous end-joining     GKE56_06015  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:teh03400]     GKE56_06015 Enzymes [BR:teh01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      GKE56_06015 DNA repair and recombination proteins [BR:teh03400]  Prokaryotic type   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     Two-component NHEJ DNA repair complex      GKE56_06015 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  LigD_Prim-Pol DNA_ligase_A_M DNA_ligase_A_C DNA_primase_S GPAT_C Motif Other DBs NCBI-ProteinID:  QGN57498 UniProt:  A0A6I5X4N3 LinkDB All DBs Position complement(1260658..1262799) Genome browser AA seq 713 aa AA seqDB search MAAKATELEVPGGPQGARLVRISSPERLIWPDEGITKLELAEYAVAVSDGYLRALGNRPV TLQRFPDGITGEEFWTKNPPKGIPDFITPVMCTYPSGRKHLQVVVDEPAAVVWAVQMNTV TFHPWPVRTTNVDNPDELRIDLDPQPGRTYADAVEAALVLREVLAELGLTGWAKTSGNRG VHVFVRVAPTHEFLDVRHGVIGIARELERRLPDLVTTSWWKEERGERVFVDFNQACRDRT IASAYSPRPLPGAPVSMPVGWGALRGVVPGDFTVRTVPGILAADGDAWLGMDDAVGDVSA AIALWDKDVHERGLGELNFPPDYPKMPGEPPRVQPSKRRKDRADEEYLGPKADRDAAWGL AVIPPVAPMLAKPVKGIPRGDYLYEPKWDGFRSVIFRSGDRVEIGSRNEKPMTRYFPEIV EAALANLPEKCVVDGEIVLIAESGDRLDFDALQQRIHPAASRVTKLSTLTPASFVAFDLL ALGDDDLTQRPLEERRALLEKALASAQPPVHLTRATRDPDVAQEWFHQFEGAGLDGVIAK PLDGTYQPDKRVMIKIKHERTADCVVAGYRTHKSGDDLVGSLLLGLYTDEGSLMSVGVIG AFPMARRKELFDELQPLVTTFDDHPWAWAKEEMGTRTPTSGATSRWNASKDLSFTPLRPE RVVEVRYDHMEGLRFRHTAQFARWRPDREPHSCTYEQLEEPVSFDLADVLGER NT seq 2142 nt NT seq  +upstreamnt  +downstreamnt atggcggcgaaggcgactgagctggaagttccgggtggcccgcagggggcccggttggta cggatctccagccctgagcggctgatctggccggacgagggcatcaccaagctcgagctc gccgagtacgcggtggcggtttccgacggctatctgcgtgccctgggcaaccggccggtg accctccagcgcttcccggacggcatcacgggcgaggagttctggaccaagaacccgccc aaggggatccccgacttcatcacccccgtgatgtgcacctacccctccggacgcaagcac ctccaggtcgtcgtcgacgaacctgctgcggtcgtctgggcggtccagatgaacacggtg accttccacccgtggccggtccggacgaccaacgtcgacaaccccgacgagctgcggatc gacctcgacccgcagccggggcgcacctacgcagatgccgtcgaggctgccctcgtcctg cgggaggtgttggccgagctcggactcaccgggtgggccaagacctcgggcaaccgcggc gtgcacgtcttcgtccgcgtcgcgcccacccacgagttcctcgacgtgcggcacggggtc atcggcatcgcccgtgagctcgagcgtcggctgcccgacctcgtgacgacctcctggtgg aaggaggagcggggcgagcgcgtcttcgtcgacttcaaccaggcctgccgcgaccggacc atcgcgtcggcctacagcccccgtcccctgcccggggcgccggtgagtatgccggtcggc tggggtgcgctgcggggcgtcgtccccggtgacttcacggtgcggaccgttccggggatc ctggcggccgacggtgacgcgtggctgggcatggacgatgccgtcggcgacgtctcggcc gcgatcgccctgtgggacaaggatgtccacgagcgtggcctgggtgagctgaacttcccg ccggactaccccaagatgcccggggagcccccgagggtccagccgagcaagcgccgcaag gaccgggccgacgaggagtacctggggcccaaggccgaccgcgacgcagcgtggggcctg gccgtgatcccaccggtggcgccgatgctggccaagccggtgaaggggattccccggggc gactacctctacgagcccaagtgggacggcttccgctcggtgatcttccgatccggggac cgggtcgagatcggcagccgcaacgagaagccgatgacgcgctacttccccgagatcgtc gaggcggcgctcgccaacctgcccgagaagtgtgtcgtcgacggcgagatcgtgctcatc gccgagtccggtgaccggctcgacttcgacgccctccaacaacggatccacccagcggcc agtcgggtcacgaagctgtcgaccctgacgccggcgagcttcgtggcgttcgacctgctc gcactcggcgacgacgacctcacccagcggcccctcgaggagcgacgcgcgctgctggag aaggccctggccagcgcccagccgccggtgcacctgactcgggccacccgtgacccggac gtcgcccaggagtggttccaccagttcgagggcgccggactcgacggagtgatcgccaag cccctcgacggcacctaccagccggacaagcgggtgatgatcaagatcaagcacgagcgc accgcggactgcgtggttgcgggctaccgcacccacaagagcggtgacgacctggtcggg tccctgctgctggggctctacacggacgagggctcgctcatgagtgtcggggtcatcggg gccttccccatggccaggcgcaaggagctcttcgacgagctgcagccgctcgtcacgacc ttcgacgaccacccctgggcctgggccaaggaggagatgggtacgcggaccccgaccagt ggagccacgagccggtggaacgccagcaaggacctctcgttcaccccgctgcgtcctgag cgcgtcgtcgaagtgcggtacgaccacatggagggcctgcggttccggcacacggcgcag ttcgccaggtggcgcccggaccgtgagccgcattcgtgcacgtatgagcagctcgaggag cccgtgagcttcgacctcgccgacgtgctgggggagcggtag

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