Tauraco erythrolophus (red-crested turaco): 104373756
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Entry
104373756 CDS
T08611
Symbol
SLX4
Name
(RefSeq) LOW QUALITY PROTEIN: structure-specific endonuclease subunit SLX4
KO
K10484
structure-specific endonuclease subunit SLX4 (BTB/POZ domain-containing protein 12)
Organism
teo
Tauraco erythrolophus (red-crested turaco)
Pathway
teo03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
teo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
104373756 (SLX4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
teo04121
]
104373756 (SLX4)
03400 DNA repair and recombination proteins [BR:
teo03400
]
104373756 (SLX4)
Ubiquitin system [BR:
teo04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
104373756 (SLX4)
DNA repair and recombination proteins [BR:
teo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
104373756 (SLX4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Slx4
zf-C2H2_jaz
zf-met
BTB
Motif
Other DBs
NCBI-GeneID:
104373756
NCBI-ProteinID:
XP_009978026
LinkDB
All DBs
Position
Unknown
AA seq
1870 aa
AA seq
DB search
MDEQDNDFKELWANLLGRAKKKAGDAEAAKRTQHRSKSTAARGRLKRGKAAAKSQNHHRL
PAVKETNLPQDLGPKEQTLVHKEDGDAVACSSGETAQEDGERNPFPASQLSTVASECSQR
TLTVNTLIGCSQTTLSFHPATQLGTCSSPTSKIPPPAGSKMRVAELVVERMQQFKRVAPE
QLKHSTDHSLPRSVASGDFPDESQEQNPPEDDTHHLPSLEHDGALALALQRNPRXSLEDA
GLFFCQICQKDLSAMNTTRREQHVNRCLDEMEEAQTSSSSKPLVPECPICGKQFQTPQSR
VSHLKRCAVEMDVPPKLLLQAVQLQVSSLGDTPPQCPGNQPSRAKRKGSSKEDSKKMQKR
AKLETKDEDLLVAMAMSRSLLEQEKQEQAKSVTNVKPVAALPIKWKPGSEKKQRKRGPTT
PPPLLLQDPEKVRKRIQERVAMLLAEEVEFPPTPKLPASRILEDESRKATWLLPLSKTRE
CFLWNISALTGPCDPELFYTAGLTPPIVPWKPVQNHKPENLLLSVGSDQPKVSQQIQPDP
SSHGPTCIEVGGQTSDEAKSGHEDGQFLSHSQKDVQILQDLVELAREGLTLTQWNLDVDQ
VQAAKQPGQELPSSDIQHSGFVPPSKEKSLLKSSCKRSSLKLLAEDFGAMVNNPHFSDVQ
FQVDSGEVLYAHMFVLYARCPQAVQVIHSQGFLVEEDGNAPTRLYAADADIPAGVLPQVG
NLAARFGVRELMEECENNTGESQGSSGVDSEDDLISVRDDKDCEDRAENFQDLLKSVWVG
EDEEEVAMLNPECQKEDDNGVGEQELEEIYEFAATQRKMVQGETEVSEGTDCSICSDTEA
DQGTNQQTEEEEVKRCESASISNSFKDLKDDNDVEKSKCDSSFKDLKDDNDVDSSAQEEK
MQNINRCRSMNDPQTTFVPHHSEAQKWDVASHGATANEGETIRRCECVKDSRSSQVSHDE
ADPCEKQFPSSHDDTNIHESYERLFSATQGDYWEPSPVKEVIKGNAPSEKDVDVNDSLLY
SKSQKDLSPRKNGFYGSPLPKPFVPLFPAFGSSPASPKSDRKLAEEHVSTPKRNKKEKSF
PSDEIYFQKANELDTTSRNENTVSPAELPHIDLNKHTYVPVLSSPVIRTQDAAAQGNKEG
DVIVLSSDDEMELQQDKKSPESGSALKTMEIPGQLKCTNVEQSSEIPKSEPESITETEQR
STQVSCGITGTVDRSNDVKMSTELPLSRQRDACMGSKQSPNLSPEKRLRHEMSLGTDSSW
LVPDTPVLSKSRSFSTQTQITSINSLKSPGSKLSTKNLAAGNSNHEGAGNLLKVHEATFA
DKHLPMETSVSERSSSSSPAAGLFSKNSPPVSPVDPVLLSPGCTNVKSKCAKMSFLSQPV
PPCREQPLEDKANVSVVEVEDSEKEISLPSVSSSVLLCDEPPVPVDDCWRVEYLSPVRGN
SQDSSQVSRAKTSTASSPKPDSWHDQWQSPDHVQEIKDSTPLRGSPVGRRTTLLCLDKSP
IEACSSVGSRPSYLNSKIWDDWNGEEEEDEFPEMLPLSQRLSAAAGACQTDPVRTPEPSC
QENNEPPSTPMTPMPAYSIMETPQLKKELSRFGVRALPKRQMVLKLKEIFQYTHQDMDSD
FEEIPSSQPPLQKSSAKHSRQSKADRTASGKRASASRAAGKRKQVATASSVLPVRSADDD
LVESHGTGCAAPMEGTEVTHHPEGAKKQKKSSVSPERSPLAADGDEPMLSASQESAVSSV
DGSDISFGSQSSFVNGFEACAFASEEEEEELPVSQAAAREEDKLEALRCYIRSNTALYNK
ILFYEPIELAALHVELKQNGIKISKAKLLDFLDAHCITFTTAGARKEKEQKRKGKKKQRR
RYXMEPTPPS
NT seq
5613 nt
NT seq
+upstream
nt +downstream
nt
atggatgaacaggacaatgattttaaagagttgtgggcaaatcttttgggacgagcgaag
aaaaaagctggggatgctgaagcagcaaagaggactcagcacaggtcaaagagcactgcg
gcaagaggtagattgaaaagaggcaaagctgctgctaaaagccaaaatcatcatcgccta
ccagcagtgaaggaaacaaacttgcctcaagatttgggtccaaaggaacaaacattggtg
cacaaagaagatggtgatgctgtggcctgtagtagtggtgagactgcacaagaggatgga
gagagaaaccctttccctgccagccagctgagtacagtggccagtgagtgtagccagagg
actctgacagtaaatactctgattggctgttcccagactacgttatcctttcatcctgct
acacagctggggacctgctcttcacccacctcaaagatcccgccgcccgcagggtcgaag
atgcgggtggcagagctggtagtggagagaatgcagcagttcaagagagtggcacctgag
cagctaaagcacagcacagatcatagcttgccaaggtctgtagccagcggggatttccct
gatgaaagccaggagcagaaccctccagaggatgatacccaccatcttccatccctggag
catgacggtgctctggctttggcgcttcagaggaaccccaggnaaagcctagaggatgca
ggcttgtttttttgtcagatctgccagaaggatctctcagccatgaacacaacacgacga
gagcagcatgttaacaggtgtctggatgagatggaagaagcgcagacgtcatcctccagc
aaaccactggtccctgagtgtcccatctgtgggaagcagttccagactccacagagccga
gtcagtcacttgaaacgttgtgctgtcgagatggacgttcctcctaagctgcttcttcag
gcagtgcagttgcaggtgtcctcacttggtgatacacctcctcagtgtcccggcaatcaa
ccaagcagggcaaagagaaaaggctcctccaaagaggactcgaagaaaatgcagaagagg
gccaaactggagacgaaggatgaagatttgctggttgctatggcaatgtcacgctctctg
ttggagcaagagaagcaggaacaagcaaaatcagttacaaatgtgaaaccagtggctgct
ttgccaatcaagtggaagccaggatcagagaaaaaacagcgtaaaagaggcccaaccaca
cctccaccattactgctccaggacccggagaaggtccgcaaaaggatccaagagcgagta
gctatgctgcttgcggaagaagtggaattccctcccacccctaagcttcccgctagtagg
attttagaggatgaatctaggaaagcaacctggctcttgccattgtccaaaaccagggag
tgttttttatggaatatcagtgctctgacaggaccctgtgatcctgaattgttctacact
gctggattaacccctccaattgtaccttggaagcctgtgcagaatcataagccagagaac
cttctgctgtcggtgggatctgatcagccaaaagtatcccagcaaattcagcctgacccc
agttctcatggtcccacttgcatagaggttggaggccaaacttctgatgaagccaagtca
ggccatgaagatggacagtttttatctcacagccagaaggatgttcagatcctccaggac
ctagttgagttggccagggaaggacttaccctcactcagtggaaccttgatgttgaccag
gttcaggcagcaaagcagccaggacaagaactgccttccagtgatattcaacatagtggc
tttgtccccccatccaaagagaagagcctcctgaagagcagctgcaaaagatcctctctc
aagttgctggctgaagatttcggtgcaatggtcaacaacccccacttcagtgatgtccag
ttccaggtggactctggggaagtcctttacgcccacatgtttgtgctgtacgcgcggtgt
ccgcaggctgtccaggtcattcacagccaagggttcttagtggaggaggatgggaacgca
ccgacacgcctttatgctgctgatgctgacatccctgctggggtgctgccccaggtgggg
aatctggctgccaggtttggtgtgagggaactgatggaagagtgtgaaaacaacactgga
gagagtcaggggtcttctggagtggattcagaagatgatcttatctctgtgagggatgac
aaagattgtgaggacagagctgagaacttccaagacctcttgaagtcagtgtgggtgggt
gaagatgaggaagaagtagctatgctgaaccctgaatgccagaaggaagatgacaatggg
gtgggtgaacaggagctggaggaaatctatgagtttgctgcaactcagaggaagatggtt
caaggtgaaacggaggtgagcgagggaacagactgcagcatctgcagtgatactgaggca
gaccagggtacaaaccagcaaactgaggaggaagaagtaaagagatgtgaatctgcttca
ataagcaacagcttcaaagatttgaaggatgacaatgatgtggaaaaatccaaatgtgac
tcgtccttcaaagatttgaaggatgacaatgatgtggactcgtctgcacaagaagagaaa
atgcagaatataaataggtgcaggagcatgaatgatccacagaccacttttgtgcctcac
cacagtgaagctcaaaaatgggacgtagcatcccatggtgccaccgctaatgaaggagag
accattaggagatgtgaatgtgtgaaggattccaggtcatctcaggtctcacatgacgag
gcagatccctgtgaaaaacagtttcctagctcccacgatgatactaatatacatgaaagt
tacgaacgcttgttttctgcaactcagggagattactgggagccttccccagtgaaggaa
gttatcaaaggaaatgctcctagtgaaaaagatgtcgatgttaatgattcacttctgtac
agcaaatcacaaaaagacctctctccacgtaagaacggtttttatgggagtcctcttccc
aaaccttttgtgcccctttttcctgcttttggctcttcacctgcctctccaaaatcagac
agaaagcttgccgaagaacacgtgtcaacaccaaagcgaaacaaaaaggaaaaatcattc
ccatctgatgaaatatactttcagaaggccaacgagctggatactacatcaagaaatgag
aacacagtttctcccgcagagcttccccacattgatttaaacaagcacacatatgtccca
gtgttgtcatcaccagtcatcagaactcaggatgctgcagctcaggggaacaaggagggt
gatgttattgttttatcttctgatgatgaaatggagttacaacaagacaagaagtctcca
gagtcaggctctgctctgaagacgatggaaatccctgggcaactgaaatgtacaaacgta
gaacaaagttctgagataccgaaatctgaacctgaatcaatcactgaaacagagcagaga
tcaacccaggtctcatgcggcattacaggtacagtcgatagaagtaatgatgtgaagatg
tccaccgaactgcctctcagcagacaaagagatgcttgtatggggagcaaacaaagtcca
aacctgagccctgaaaaaaggctcaggcatgaaatgtctttaggtacagacagctcctgg
ctagtgccagacacaccggttctgagcaaaagcagaagtttctcaacacagactcagatc
acaagtattaattctttaaagagtccaggatctaaactcagcacaaagaacttggcagca
ggcaacagtaaccatgaaggggctggaaatttattaaaagttcatgaagccacatttgca
gacaaacatttgcctatggagacctcagtcagtgaaaggagctcttcgagcagcccagca
gcaggattgttttccaagaactccccaccagtttctccagtggatccagttctcctctcc
cctggctgcaccaacgtaaaaagcaagtgtgccaagatgtcgtttttatcccaacctgtg
cctccatgccgtgagcagccattggaagataaagcaaatgtcagtgtggtggaggtagag
gacagtgaaaaggaaataagcctgccttctgtgagcagtagcgtcttgctttgtgacgag
cccccagtccccgtggatgactgctggcgtgttgaatacctgtcaccagtcagaggtaac
agccaggactccagccaggtcagccgtgcaaagaccagcactgccagcagccccaaacca
gactcttggcacgatcagtggcagagcccagaccacgtgcaggaaattaaggacagtacc
cctcttcgaggaagtcctgttggcagaagaacaactttgctgtgtcttgacaagagtcct
attgaggcatgttcatcagtgggcagtaggccaagttatctgaactccaaaatctgggat
gattggaatggagaagaggaggaagatgaatttccagagatgcttcctctgtctcagagg
ttgtcagctgcagcaggtgcctgtcagacagatcctgtgaggactcctgaaccttcctgt
caggagaacaacgagcctcccagcactccaatgacacccatgccagcttactccatcatg
gagaccccacagctgaagaaggagttgagcagatttggagttcgtgctctcccgaaacgc
cagatggtgttgaaactgaaggagatattccagtatactcaccaggacatggactctgac
tttgaggaaatcccatcttcccagcctcccctgcagaagtcctcagccaaacactccagg
cagtcaaaggcagaccggactgccagtggaaagcgtgccagtgcctcgagggctgcaggc
aaaaggaagcaggttgctacagcttcttcagtgctccctgtacggagtgctgatgatgac
cttgttgaatcccatggaacagggtgtgcagcacccatggagggaactgaagtgacacat
catccagaaggagccaaaaagcagaaaaagtcatcggtatctccagagagatcgcctctg
gcagctgatggtgatgaaccaatgctctcggcatctcaggagtctgcagtttcttcagtg
gatggaagtgacatctcttttggctcacagagttcttttgtgaatggatttgaagcctgt
gcttttgcatccgaggaggaggaagaggagcttccagtatctcaggcagcagctcgggag
gaagataagctggaggcattaaggtgctacatccgttcgaacacagccctgtacaacaag
attctcttttatgagccaattgagctggctgcattgcacgtagagctcaagcagaacggc
attaaaatttccaaggcaaagctgctggactttttagatgctcactgtatcacatttacc
acagctggagcccggaaagagaaggaacagaaacgaaaggggaagaaaaaacagaggaga
cgatactgaatggagcccactcctccatcctga
DBGET
integrated database retrieval system
