Tessaracoccus aquimaris: BW730_05015
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Entry
BW730_05015 CDS
T04732
Name
(GenBank) hypothetical protein
KO
K01971
bifunctional non-homologous end joining protein LigD [EC:
6.5.1.1
]
Organism
tes
Tessaracoccus aquimaris
Pathway
tes03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
tes00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
BW730_05015
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tes03400
]
BW730_05015
Enzymes [BR:
tes01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
BW730_05015
DNA repair and recombination proteins [BR:
tes03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
BW730_05015
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigD_Prim-Pol
Motif
Other DBs
NCBI-ProteinID:
AQP49215
UniProt:
A0A1Q2CT32
LinkDB
All DBs
Position
complement(1055209..1056150)
Genome browser
AA seq
313 aa
AA seq
DB search
MNDRITTEVDGVSLSLSNLHKPLFPSGFTKGELISYYVEVADAMLPHLRGRAVTRVRFPN
GTSAQSFFEKNAPAGAPEWVRTLDVATSAGSVNYVLAEDRATLAWLANLAAVELHTPQWR
AEHANVGPDGVILEGEDEPRSTTLIVDLDPGPGITPADSAKGAILAATLLAQLGLEAFPK
TSGNKGLQLSVPIAPTPASRVFAFAGSLAKALAAAHPKLFIATMSKEARSGLIFVDYAQN
LAARNTVTAYSVRGLDEPSVATPLTWDEVGALTPETRLRTSPAELLERLGRYGDLWAAQV
STPDSPALPDPLT
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgaacgacaggatcacgactgaggtcgacggggtctcgctgagcctcagcaacctgcac
aagccgctgtttccgagcggcttcaccaagggcgagctgatctcctactacgtcgaggtc
gccgacgcgatgctgccccacctgcgcggccgggccgtcacgcgggtgcggttccccaac
gggacctccgcccagtcgttcttcgagaagaacgcccccgccggggcgccggagtgggtc
cgcacgctggacgtcgccacctctgcaggcagcgtgaactacgtgctcgccgaggaccgg
gcaaccctcgcgtggctggccaacctggccgccgtcgagttgcacacgccgcagtggcgc
gccgagcacgcgaacgttggtcccgatggcgtgatcctcgagggcgaggacgagccacgc
tccacgacgctgatcgtcgacctcgacccaggcccgggcatcaccccggcggactcggca
aagggcgcgatcctggcggcgacgctgcttgcccaactcggcctcgaggcgttcccgaag
acctcggggaacaaggggttgcagttgagcgtcccgatcgccccgacgcccgcctcgcgg
gtgttcgctttcgccgggtcgctcgcaaaggcgctcgctgccgcgcacccgaagctgttc
atcgccacgatgagcaaggaggcgcgctcggggttgatcttcgtcgactacgcccagaac
ctcgccgcccgcaacacagtgacggcctactcggtgcggggcctcgacgagccgtcggtt
gcgacgccgctgacgtgggacgaggtcggcgcgctcactcccgagacgcggctgcgaacc
tcccccgccgaactgctggaacggctggggcgctacggtgatctgtgggcggctcaggtg
tcgaccccggacagcccggcgttgcccgacccgctgacctga
DBGET
integrated database retrieval system