KEGG   Tetrahymena thermophila: TTHERM_00723290
Entry
TTHERM_00723290   CDS       T01020                                 
Name
(RefSeq) Sm protein B domain protein
  KO
K11086  small nuclear ribonucleoprotein B and B'
Organism
tet  Tetrahymena thermophila
Pathway
tet03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tet00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    TTHERM_00723290
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tet03019]
    TTHERM_00723290
   03041 Spliceosome [BR:tet03041]
    TTHERM_00723290
   03032 DNA replication proteins [BR:tet03032]
    TTHERM_00723290
Messenger RNA biogenesis [BR:tet03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    U7-dependent histone pre-mRNA processing factors
     TTHERM_00723290
Spliceosome [BR:tet03041]
 Complex A
  U1 snRNP components
   Sm proteins
    TTHERM_00723290
  U2 snRNP components
    TTHERM_00723290
 Complex B
  U1 snRNP components
    TTHERM_00723290
  U4/U6.U5 tri-snRNP components
    TTHERM_00723290
 Complex C
  U2 snRNP components
    TTHERM_00723290
DNA replication proteins [BR:tet03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     TTHERM_00723290
SSDB
Motif
Pfam: LSM SM-ATX DUF5792
Other DBs
NCBI-GeneID: 7833923
NCBI-ProteinID: XP_001031807
TGD: TTHERM_00723290
UniProt: I7MFR0
LinkDB
AA seq 159 aa
MANRSKFMQWIDYRVRVTIQDGRMLVGTFLAFDKHLNLVLSETEEFRPIKPKTKGEPERQ
TKRILGLVIIRGENIVSINAEAPPSQQAKKIDTSATGPGTAQPINRVGTVPPMMDRPPQM
PPGQPPMGMMPPPMPGMPPMHPGMLPPNLRPPGTLPPSY
NT seq 480 nt   +upstreamnt  +downstreamnt
atggcaaaccgtagcaaatttatgcaatggattgactaccgtgtccgtgttactatttaa
gacgggcgtatgttagttggtaccttccttgcatttgataaacacttaaatcttgtttta
agtgaaactgaagaattcagacccatcaagcctaagactaagggtgaacctgagagacaa
actaagcgtattcttggattggttatcatcagaggtgaaaatatagtatctataaatgca
gaagctcctccttctcagcaggcaaaaaagatagatacaagtgccactgggccaggtact
gcccagcctattaatagagttggcacagttcccccaatgatggatagacctccttagatg
cctccaggtcaacccccaatgggcatgatgcctcctcctatgcccggaatgcctcctatg
catcctggtatgctacctcctaatcttagacctcctggtactcttcctccaagctattga

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