KEGG   Tessaracoccus sp. T2.5-30: BKM78_00210
Entry
BKM78_00210       CDS       T04747                                 
Name
(GenBank) hypothetical protein
  KO
K01971  bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
tez  Tessaracoccus sp. T2.5-30
Pathway
tez03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:tez00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    BKM78_00210
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tez03400]
    BKM78_00210
Enzymes [BR:tez01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     BKM78_00210
DNA repair and recombination proteins [BR:tez03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     BKM78_00210
SSDB
Motif
Pfam: LigD_Prim-Pol
Other DBs
NCBI-ProteinID: AQX14536
UniProt: A0A807N1A5
LinkDB
Position
complement(41695..42636)
AA seq 313 aa
MSERIATRIDGLTLTLSNLDKPLFPSGFTKGELISYYVGVADAMLPHLRDRAVTRVRCPD
GTAGPSFYEKNVPPGAPDWVDTVDVATSAGTVTYVTAHRTADLVWLANLAAVELHTPQWL
IHDATDSPDGLLLSGEHEPRATTLIVDLDPGPGITPADSARAAIRAATVLAEVGLVAHPK
TSGNKGIQLTVPIQPTPASVVHAFATALAQHLARSHPSMYVATMSKEARANLVFVDYGQN
LAARNTVTAYSVRGLDEPSVATPLTWDEVAALRPDSVLRTSPTQALDRVQRLGDLWAATL
PTAASPSLPSPDF
NT seq 942 nt   +upstreamnt  +downstreamnt
atgagtgaacggatcgccacccggatcgacgggttgacgctcaccctgagcaatctcgac
aagcccctcttcccgtccgggttcaccaagggggaactcatctcctactacgtcggcgtc
gccgacgcgatgctcccgcacctccgggaccgcgccgtgacccgggtccgctgccccgac
ggcacggccggcccctccttctacgagaagaacgtgccccccggcgcccccgactgggtc
gacaccgtggacgtggccacgtcggccggcaccgtcacctacgtgactgcccaccgcacg
gccgacctcgtgtggctcgcgaacctcgccgcggtcgagctgcacaccccgcagtggctc
atccacgacgccaccgactctcccgacgggctgctgctctccggcgagcacgagccccgc
gccaccacgttgatcgtggacctggatccgggtccggggatcacgcccgcagactccgcc
agggccgcgatcagagccgcgacggtgctggccgaggtgggcctcgtggcgcatcccaag
acgtcgggcaacaagggcatccagctgaccgtgcccatccagcccacccccgcgagcgtc
gtgcacgcgttcgccaccgccctcgcccagcacctggcccgcagccacccctcgatgtac
gtcgcgacgatgagcaaggaggcccgtgccaacctggtcttcgtcgactacgggcagaac
ctcgcggcgcgcaacacggtgacggcgtattcggtgcgcggcctggatgagccgtcggtg
gcgacgccgctgacctgggacgaggtggccgcgctgcgtcccgattcggtgctgcgcacc
agtcccacgcaggcgctggaccgggtccagcgcctgggagatctgtgggcggcgacgctg
ccgacggccgcctcaccgtcgctgccgtcccccgacttctga

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