Tachysurus fulvidraco (yellow catfish): 113637871
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Entry
113637871 CDS
T08119
Symbol
usp16
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 16 isoform X1
KO
K11844
ubiquitin carboxyl-terminal hydrolase 16/45 [EC:
3.4.19.12
]
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
113637871 (usp16)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tfd01002
]
113637871 (usp16)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tfd04121
]
113637871 (usp16)
Enzymes [BR:
tfd01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
113637871 (usp16)
Peptidases and inhibitors [BR:
tfd01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
113637871 (usp16)
Ubiquitin system [BR:
tfd04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
113637871 (usp16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
Motif
Other DBs
NCBI-GeneID:
113637871
NCBI-ProteinID:
XP_026994586
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All DBs
Position
11:1885105..1893792
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AA seq
812 aa
AA seq
DB search
MGKKRAKARGKGPEEDMDGSADLMGVKCTHVRKGTDPGWLRKTSMDESWDVCEECETCER
KKESDDKDAQEMPAIWMCLKCGHRGCGRFSENQHAIKHYETPRSEQHCLVLSLDNWSVWC
YICDDDISYSSTGQLAQLISNIKKQLQDESRHKAATRSKCHSDPMNRAEAEEEKNPSSET
VQENKAGKEQESKEEQKENKKCVKQNGQEAQCRTVPVRGLSNLGNTCFFNAVLQNLSQTL
LLREQLGDFRDEEKSVLITPSSSSQLDPLQVQLPRPGSLTLAMCQLLNEIQVTRKGVVTP
SELFTQVCKKAARFKSFQQQDSQELLRHLLDGMEAEENIRVTCGILNALKSSGKTSEPEQ
KKLVKEYKSNGVTKSFVEHVFGGELTSTLMCLECKTVSMVTEVFLDLSLPVANEAYRKKK
VGGQQKKSESTESLPSVATPLTNGIEDMPTGAGSKYQQKKAKKQAKKQAKTQRRQQKQST
KFALDLLTNQSEDADSPEASSLSTDEQQKAETESGAEELMTPANEEREEEDDEEESEAPN
TSSNRFISLSEQGTTNPEVEEEDGHREATLTKRVRALSISEDQQRIKEVEPEVESGAESE
TETGFVAVNADPIAAFSTLSSRAALNNSESSVESCLQEFTQVEQLTHPNSLLCVTCSQRA
SDGGKKKVYTEGIKQMLISSPPPVLTLHLNRFKKVGYSLCKVNRHVQFPQVLDLGPFCSV
KCKGVKEGQTQLLYSLYGIVEHSGTMRSGHYTAFVKARPYTHASSGLLNGAAEDGTPLEG
SWFYVSDSSVQSVTEARVQSSQAYLLFYERIS
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
atggggaagaaacgagccaaagctcgaggcaagggtcccgaggaggacatggacggctct
gcagacctgatgggtgtgaagtgtacgcacgtccgtaaaggaacggaccctggctggctg
aggaagacgagcatggatgagagctgggacgtgtgtgaagagtgtgagacgtgcgagcgg
aagaaagagtccgatgacaaagatgcacaagaaatgccagcgatatggatgtgtctcaaa
tgtggacacagaggttgcgggaggttctcagagaaccaacacgccattaaacattacgag
acgccacgttcagaacagcactgcctggtgctcagcctggacaactggagtgtgtggtgt
tatatctgcgatgacgacatctcctactccagcaccggacaactggctcaactcatttcc
aacatcaagaaacaattgcaggacgaatccagacacaaagccgccactaggagtaaatgc
cacagtgacccgatgaacagagcagaagcagaagaagagaaaaacccttcaagtgagacc
gtgcaggaaaacaaggctggaaaagagcaagaaagtaaagaagagcagaaagaaaacaag
aagtgtgtgaagcaaaatggccaagaagcacaatgccgcacggtgcctgtgcgaggcctc
agcaacctcggcaacacctgcttcttcaacgccgtactgcagaatctgtcgcagacgttg
ctgctgcgtgaacaactcggtgacttccgggacgaagaaaagagtgtgttgatcacaccg
tcatcatcctcacaattagatcctcttcaggtgcagttaccgagacccggctctctcacc
ctggccatgtgtcagctgctcaatgaaatccaggtgaccagaaaaggcgtggtgacccca
agtgagctcttcacgcaagtgtgtaaaaaggcggcaagatttaaaagcttccagcaacag
gacagtcaagagctcctgcgccacctgctggacggaatggaagccgaggagaacatcaga
gtaacttgcgggattctgaatgcgctgaaaagttcagggaaaacctccgagccggagcaa
aagaaattagtaaaagaatataagagcaacggtgtgacgaagagttttgtggaacatgtg
tttggcggagagttgaccagcaccttgatgtgtttggagtgtaagactgtttccatggtt
acggaggtgtttctcgatctctcgctacctgtagctaatgaggcttacaggaaaaagaag
gttggcggtcagcagaagaagagcgaaagcacggaaagtttgccgagcgtcgcgactcca
ttgaccaatgggattgaagatatgccgacgggagccggaagcaagtaccagcaaaagaaa
gccaagaagcaggcgaagaaacaggctaagacccaacggcgtcagcaaaagcaaagcaca
aagttcgccctggatttgctgaccaatcagagcgaagacgcggattctccggaagcctcg
tccctgagcacggacgagcagcagaaagctgaaaccgaaagtggagccgaagagctcatg
acgcctgctaatgaagagagagaggaggaggatgatgaagaagaaagcgaagcaccgaac
acctcctctaacagattcatcagcctatcagaacagggaacaacgaacccggaggtggaa
gaggaagacggccacagagaggcgacgctaaccaagagggtgagagcgctgtccatctct
gaggatcagcagaggatcaaagaggtggagcctgaggtggagtcgggggcggagtcggag
acggagacaggttttgtggcggtgaacgcagacccgattgctgcgttctcaactctgtcc
agcagggcggctctgaacaactcggagagctcggtggagtcgtgtcttcaagagttcaca
caggtggagcaactgacacaccccaacagcctactgtgtgtgacctgcagccagagagca
tcagacggtggtaagaagaaggtgtacactgagggaataaagcagatgctgatctcttct
cctcctcctgtactcactcttcacctaaacaggttcaagaaggtgggttacagtttgtgt
aaagtcaacaggcatgtacagtttcctcaggttctggatctcggtccattctgttccgtc
aaatgcaagggagtgaaggaaggacagacacagctcctctactctctctacggtattgtg
gagcacagcggcaccatgcgctcgggtcactacacagcattcgtcaaagcccgaccttat
acacacgctagcagcggtttgctaaacggagcggcagaagacgggacgcctctggaaggt
tcttggttctacgtcagtgacagcagcgtgcagtcggtcacagaggctcgagtgcagtcg
tctcaagcctacctgctcttctacgagaggatctcttaa
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