Tachysurus fulvidraco (yellow catfish): 113639888
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Entry
113639888 CDS
T08119
Symbol
alms1
Name
(RefSeq) Alstrom syndrome protein 1 isoform X1
KO
K16741
alstrom syndrome protein 1
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tfd03036
]
113639888 (alms1)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
tfd03037
]
113639888 (alms1)
Chromosome and associated proteins [BR:
tfd03036
]
Eukaryotic type
Centrosome formation proteins
Other centriole associated proteins
113639888 (alms1)
Cilium and associated proteins [BR:
tfd03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
113639888 (alms1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ALMS_motif
Motif
Other DBs
NCBI-GeneID:
113639888
NCBI-ProteinID:
XP_026997930
LinkDB
All DBs
Position
4:12654638..12667689
Genome browser
AA seq
2147 aa
AA seq
DB search
METLGEGEDGEIFNREIESWHQLPVEEDPSQFLGQTSGLLEADGIQGITLNSEGEMATMG
DSNVQPAANRFEFLQLELQDSCLSPALTLIPQGKAFLPSEFTLLHQTDLEFVPLRGSPDL
SIASERCSQMSRLDEDVESNLTHRSHEQASLSQHHLGTMSTILEDANSYCSLSQHSLSPG
SNYQATQIHDEEHNSGLLNNDEAQKEGKEQTDTDLDGRGNSCGQKLLEKVLGVASSRISS
SSETGLSQTDVVLRSTDSPEGQNKHSALSQKQDPACTSIKEHQFRPSQSREQPQGGSSSL
LSQRRTMERGSLSLSTRLSAISNITVRSTVQHSESSLAAREGRNQTENKNTPIGQNVPLV
SEGGGLQRALWSSGSNKAADGSFLTSQPVFQSTPAVLLGRGALVAARLSPVYSYRDNVAS
TQNSTPNPDDIPALKLSTSRHTSMAGVTIALNQGEAHTEHHEIPHSQEAPLPVLDVPVIA
DKDKTLDQPTLATLLPTSDQQLKDQEPRLSEKRVHSLPILSYVQKVDAWKANQSSSRSMH
DSMSWKEGKEQDSVSEATKQQSRQHSNKTSSIFSANSSTAPTQTGSGVLSCADVEVAGGA
VGSTSPSPFTHSCSHSSNGTVITPIQHDELQQNQNRPPLTGYTPIAISRGFNSTAAELSL
SSCETSSQRPADDLGTGPLKPPALLNVDQYSGINVNNNMSNTIPNFQASIGAASSVVSLE
LDNYAPYWTSRPGSPRRPPEFNIEDRIPLYLHNLGIDQSPSTILNPFTQRGPIREPEYSP
TDLCTIKGSVGTPTKSIQPSDSDSFQKETFSNSSVLSADSSASLTQLFIQQSLQQPTRQA
SSGSIKMDHYQTGILAEPLSQSHSVLHAADSSNREGSYGLPTQFSLQSAAGTLESIKEGD
SSLVGSGTLQEIRRLLGHADSLVSGHSSEASFHVSHCYSESDASFLSLRQKTQPYHDDSF
LSVDEKISLVLACSSSDSALKESSSSSSGPLELSTNSDHVSKGPTAPSLGREEVPKSRDI
CVAPRRAEPEGCSAADPDRVGPVSQSITQGNASSTSDCQQQSQDHTENAGIILSEISPTY
SQTEAEMGVLSNGSSEHSLASRVAKLLQSESSVSVVTSRSSTADSDESQAREWIMMKVSS
AKCESLDLNAEDRKRIEEIKRELLLCTKHAKSSSDSESSTQASVGSVPQPAVGFAAVHSA
EDHLSEQLQRVCQIPLHTPPEDRVIQVGLKEGCNPEHTPSPQTANQCLYTHNSHASHNDK
GQTKNEGGKGIMGKEKEVRDEDEHPDSERNEPLVIRGKREFPTGLESGLTLGHKPHFINS
HFTPAVTVTLQQNTTQSPANTSSSYPELLTGSHTHQSESLNTSRGVSISVSSTNEEQQVS
VSSETNSSKDRNTHQDQDIGMLNGYSQMSSRSPQAFTFAQRLAGPSRPLVNTTATTGLLP
YKPHGSSELFYMPQIFPELSPNHSDTTVESSHPGSDDAVPPQFTPEVLGSRELMDNSVTP
KHKEGIYSKRPKMKRESTTSGKGFHNRKGNTGLLYQHTAFSKTAVLENEQVDEQTEEGKA
FIPLHVEANCSTTELDPNHRVQKHNMGKETICSLTKTTREKKQNINAQDLSAEIDSSLDQ
LWHRFNEQFIFQDTKTTNNLEISLLERLERLSRLLQGSTPLHTPSPAHSRAEKGKSRTRE
HEPRRTQGTDTTKNRKEQERNEVRGILKTAWDKNKSFSNKQILVEKKQQGKDYCFPAERV
QSDSVSVDTSSSQSTIDTQRLIKAFGAHRVGKSNSGREGVEGSQPPKPNDGLLKLYNHIK
KQKRGHGKGSSENHFVSVATEISNTDDSMASETLSSSSTSTLPSQSDTGRTTSCKRAKVK
LVSRSIQAGDLEIVVNGTRRDTRDVGTTFPSPGSARVPRTSSADCSEVKDSMSALKASSA
VHLQPVLRKQAPSKQPSYPNGLSWFVSADELKWDARKENNPQTVAGKSEGQAWFEPYTRM
QPWREPLRERHIQVERENSPDHKTHAENDSGNKPSSLVRLSLQEVLELRRPEFVSRSRER
MKRLCLLAEERKMQAIFNKEREELFNHPSAVQQPKAAPAPPPLPSKRVIPVNEMIQRSKR
IYSQLPEVQKRKEEERRKAEYNTYRLNAQLFNKKITNRVLGKRSPWQ
NT seq
6444 nt
NT seq
+upstream
nt +downstream
nt
atggagacgttaggagaaggtgaagatggggaaatttttaacagagagattgagtcatgg
caccaactccctgttgaagaggatcctagtcagtttctgggacaaacatcaggtttgctg
gaagctgatggtatacaagggatcacacttaactctgaaggagaaatggctaccatgggt
gactcaaatgtgcagccagcagccaacagatttgaatttttacagctagaattgcaggat
agctgtttgtcgcctgcactgaccctaattcctcaggggaaggcctttttaccttcggag
ttcactctcctccatcagacagatttagagtttgtccctttaagggggtcacctgatctg
tcaattgcttctgagaggtgctctcagatgtctcgcctagatgaggatgtagagtccaac
ctcacacacagatcccatgaacaagcatcactatcacagcatcatttggggacaatgtct
acaattttagaggatgctaatagctactgctcactatcacagcacagcctgtcacctggt
agcaattaccaggcaacccagattcatgatgaggaacacaatagtggcttgttgaataat
gatgaagcacagaaggagggaaaggaacaaactgatactgatttggatggaagaggaaat
tcatgtggtcagaagcttctggaaaaagttcttggcgtagccagtagcagaatctcctct
tcctctgaaactggtctcagtcagacagatgttgtcctaagatcaacagacagccctgaa
ggccagaataaacattctgctctttcacagaagcaggatcctgcatgtacctctataaag
gaacaccagttcagaccatctcagagcagagagcagccacaaggtggctcttcgtccttg
ttatcgcaaagaaggactatggagagaggcagtttgtcactttccactcgtttatctgcc
atctcaaatattacagttcggtccacagttcagcacagtgagtcctcattagctgcacga
gaaggtagaaatcaaactgagaacaaaaacactccaattggacagaatgtccctctggtc
agtgaaggtggtgggctgcagagagcactctggagctcaggcagcaataaagcagcagat
ggttcctttttgacctctcagcctgtgtttcaatccacgcctgcagtgctccttggtaga
ggagcactagtcgcagccagactctcccccgtatattcttatcgagacaatgtggcatca
acccaaaacagcactcctaatccagacgacattccagcattaaaactaagtacctcaaga
catacaagcatggctggagttacaatagctttaaaccaaggtgaggctcatacagagcat
catgagatacctcatagccaagaagcccctttgccagtgttagatgtgcctgtcattgct
gataaagacaaaacacttgaccagcctaccttagccacacttctgcctacatctgaccaa
caacttaaagatcaggagcctagactgtctgaaaaaagagtgcattctctacccatcctc
agttatgtgcagaaggttgatgcttggaaagccaatcagagttccagcaggtcaatgcat
gacagtatgtcatggaaagaagggaaagaacaagactctgtgtctgaggcaacaaaacaa
caaagtcggcaacattccaataaaacatcttcaatatttagtgccaatagcagtactgca
cccactcagacaggcagtggtgtgctgtcatgtgcagatgtggaagtggcaggaggagct
gtgggatccacgtcaccatcaccatttactcactcctgttcccactcctctaatggaaca
gtcatcacacccatccagcatgatgaattgcaacaaaaccaaaatcggcctcctcttaca
ggatatactcctattgccatctctcgaggcttcaactccactgcagctgaattgtccctg
tcatcatgtgaaacaagtagccagaggccagctgatgacttaggaactggtcctttaaaa
ccccctgctttgcttaatgtagatcagtacagtggcataaatgtaaataacaacatgagc
aacacaattcccaattttcaggcatcaataggtgcagcttcctctgttgtaagtcttgaa
ttggacaactatgcaccttattggacttctagacctggatctccccgacggccccctgag
tttaacatcgaagacagaatccctctctaccttcacaatttggggattgatcagtcaccg
tcaacaatcttaaatccctttacacagcgggggcccatcagagaacctgaatattctcct
actgatttatgtaccattaaaggctcagtgggaacacccaccaagagcatacagccttct
gacagtgacagttttcagaaggagacattctcaaattcaagtgtgctttctgcagattcc
agtgcctctttaacacagttatttattcagcagtcccttcagcagccaaccagacaagct
agttcaggcagtataaaaatggaccactaccagacaggcattcttgctgagccccttagt
caatcacacagtgttctccatgcagctgacagttctaatcgagagggcagttatggactg
ccaactcagtttagccttcagtctgctgctgggactttggagagtattaaagaaggggac
tcatctctagtgggttctggaaccctgcaagagatcaggcgtttacttggtcatgccgat
agcctggtgtctggacattcctcagaagcctccttccatgtctcacactgttactcagag
agcgatgcttcctttttgtcactcaggcagaaaacacaaccatatcatgatgactcgttt
ttgtcagttgatgaaaagatttctttggtactagcttgctcatcttcagactctgccctg
aaagagagctcctcatcttcatctgggcctctagagctgtccacaaattctgatcacgtg
agcaaagggcctacagcaccctctctgggcagggaggaagttccaaagtcacgtgatatt
tgtgtggctccaaggagagcagagcctgagggatgcagtgcagcagaccctgacagggta
ggccctgtgagccagtcgattacacaggggaacgcttcttcaacatcagattgccagcag
caaagtcaggaccatacagagaatgctggcataattttgtctgagataagtcccacctac
agtcaaacagaggcagaaatgggtgttttaagtaatggcagcagtgagcattcactggcc
tctagggttgctaagcttctgcagagcgagtcgtctgtctctgtggttactagccgctca
agtactgctgattccgatgagagccaagctagagagtggatcatgatgaaggtttctagt
gccaagtgtgaatccttagaccttaatgcagaggacaggaagagaattgaggagataaaa
agagagctcctgctgtgtactaaacatgccaagtcgagctcagattcagaaagcagtaca
caggctagtgttggctctgtccctcagcctgctgtaggctttgcagcggtgcacagtgca
gaagaccatctctctgagcagctgcagagagtctgtcagattccactgcacacaccacca
gaggacagagtaattcaggttggcctcaaggagggatgtaaccctgagcacacaccctcc
cctcagacagcgaatcaatgcctgtatacacacaacagccatgcttcacacaatgacaaa
ggacaaacaaaaaatgaagggggaaagggtatcatgggaaaggaaaaagaggtgagagat
gaagatgaacacccggacagtgagagaaatgagccattagtcatcagaggaaaacgagag
ttccctacaggcttggaatcaggtttaacccttggtcataaacctcactttatcaatagc
cacttcacacctgcagtgacagtgacattacagcaaaacaccacccaaagtcctgccaat
acttcctccagctacccagaactgctgactggatcacacacccatcagtcagaaagtttg
aatacctcaagaggagtctcaatctcagtctccagcacaaatgaagaacagcaagtgtct
gtatccagtgagaccaactcaagtaaagacagaaacacacaccaggatcaggacatagga
atgctcaatggatattcacagatgagctccagatctccacaagcctttacctttgcccaa
agactggctggaccaagtagacctttagttaatacaactgctactacaggtttattgcca
tacaaacctcatggtagttcagagctcttctatatgccacagattttccctgaactctcc
cctaaccactctgataccacagtggagagctctcatccaggatctgatgacgctgtaccc
cctcaatttacccctgaggttttgggatccagagagctcatggacaacagcgttacaccg
aaacataaggagggcatttacagcaagaggcccaaaatgaaaagagaatccactacatct
ggaaaaggctttcataaccgaaaaggaaatactggtcttctttatcagcatactgctttt
agtaagactgctgtccttgaaaatgagcaggttgatgagcaaactgaggagggaaaagca
tttatccccctgcatgtggaggcaaactgcagcacaactgaactagatcctaaccacaga
gtacaaaagcataacatgggaaaggaaactatatgttcgcttactaagaccacaagggag
aagaaacagaacataaatgctcaggacctcagtgcagagattgacagctctctggaccag
ttgtggcatcgtttcaacgagcaattcatttttcaggacactaaaaccactaacaaccta
gaaatatcgctgctggagagactggaaagattgtcccgtcttctacagggttccactccg
cttcacacaccttcaccggcacacagtagagcggagaaaggcaagagtaggacaagagaa
catgagccacggagaacacagggaacagacacaaccaaaaataggaaagaacaagaaaga
aatgaagtgagaggtattctaaaaacagcatgggataaaaataaatcttttagtaacaaa
caaatattagtagagaagaaacagcaaggaaaagactattgctttcctgcagagagagtc
cagtctgacagtgtttctgtggacactagtagcagccagtcaaccatcgacacacaacgc
ttgatcaaagctttcggagcacatagagttggtaagagtaacagtgggagagaaggggtg
gaaggaagtcagccgccaaagcccaatgatggcctgctgaaactttataaccacattaag
aagcagaaaagaggacatggaaaaggtagctctgaaaatcactttgtttctgttgccaca
gaaataagcaacacagatgactccatggcctcagaaacattatcatcctcaagcacttct
accctaccctcccaaagtgacactggacgtactactagttgtaagagagcaaaagtcaaa
ctggtcagcagaagcatacaagcaggtgatttggagattgttgtaaatggcacccgcaga
gacacacgggatgttggcactaccttcccatctccaggtagtgccagagtccccaggaca
tcttcagcagactgcagtgaggtaaaggacagtatgtctgctctcaaggcttccagtgct
gttcacctccaaccagtgctgagaaaacaggcccccagcaaacaacccagttacccaaat
ggtttatcatggtttgtttctgctgatgaactgaaatgggatgcacggaaggagaataac
ccccaaacagttgcagggaagtctgaaggacaagcctggttcgagccatacactaggatg
cagccatggagagagccgcttagagaacgtcacattcaagtagaaagagagaattctcct
gatcataaaacacatgcagagaatgattccggcaacaaaccctcttccctagtccgtctt
tctctgcaggaggtgctggagttgcgtcgaccagagtttgtgtcacgttcacgggagcgg
atgaaaaggctgtgcctgctagcagaggagagaaaaatgcaagccatcttcaacaaagaa
agagaagagcttttcaaccacccttcagcagtacagcagccaaaagcagcaccagctcct
ccacctcttccttctaagcgagttattcctgtaaatgagatgatccagagatccaagcgg
atctattctcaactcccagaggttcagaagaggaaggaggaagaaaggagaaaagcagag
tataacacttatcgccttaatgctcagctatttaacaagaaaattaccaatcgtgtgctg
ggaaaaagatcaccttggcagtag
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integrated database retrieval system
