Tachysurus fulvidraco (yellow catfish): 113643228
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Entry
113643228 CDS
T08119
Symbol
usp13
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 13 isoform X1
KO
K11836
ubiquitin carboxyl-terminal hydrolase 5/13 [EC:
3.4.19.12
]
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tfd01002
]
113643228 (usp13)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tfd04121
]
113643228 (usp13)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tfd04147
]
113643228 (usp13)
Enzymes [BR:
tfd01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
113643228 (usp13)
Peptidases and inhibitors [BR:
tfd01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
113643228 (usp13)
Ubiquitin system [BR:
tfd04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
113643228 (usp13)
Exosome [BR:
tfd04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
113643228 (usp13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP_var
UBA
zf-UBP
UCH_1
Motif
Other DBs
NCBI-GeneID:
113643228
NCBI-ProteinID:
XP_027003149
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All DBs
Position
5:complement(11763311..11785231)
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AA seq
859 aa
AA seq
DB search
MATDLGELLVPYMPTIRVPRSGDRVYKSECAFSFDSPESEGGLYVCMNTFLGFGREHVER
HYRKTGQSVYMHLKRNVKEKATGAAGGAVPRRRNGKIFLDLELNRDFNGDDYEYEDEAKL
VIFPDHYEIPLPNIEELPALVTIACDAVLNAASAYKKQEQDSWEEELQVSKHARGLRQQE
NRGRIPPSGWKCAKCEMRENLWLNLTDGSVLCGKWFFDGSGGNGHALEHYKETKFPLAVK
LDTITPDGADVYSFDEEEAVLDPHISEHLAHFGIDMLKMQRTENGHHTDNHMQPQATESE
VIQESGLKLKAVYGSGYTGIRNLGNSCYLSTTMQVLFSIPEFQRAYVGNLQRIFDYSPLD
PTQDFSTQMAKLGHGLLSGLYSKPPLKSELIEQVMKEEHKQQHRGITPRMFKALVSKGHP
EFSSNRQQDAQEFFLHFINLVERNSAGSENPSDVFRFVVEERVQCCQSQKVRYTQRVDYL
MQLPVPIEAATNREELIAYEIKRKDAEENLHAPPDPVRARIPFTACLQAFNEPENVPDFW
SSALQAKSAGVKTSRFASFPDYMVVQLKKFTFGVDWVPKKLDISVDMPDFMDLNWLRATG
LQASEEELPDLTPPIVIPEDTRENSVNNSLESPEIDEASVMQLAEMGFPLEACRKAVYYT
GNMGAEMAFNWIIAHMEEPDFAEPLAIPSYMEADLPSASFPTATPLDNQPPEESISILTS
MGFPRHHTIRALKATNNNLERALDWIFTHPESEEESEPMSDMADTEPNDMSFSNANTHSD
STLSPEQEVCSPRVRDGPGRYELFAFISHIGTSTMSGHYVCHIKKEGRWVIYNDHRVCLS
EKPPKDLGYIYFYRRLPSC
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
atggcaacggatctgggagagctgctggtgccgtacatgcccaccatacgggtaccgaga
tcaggagacagagtgtacaagagcgagtgcgccttttccttcgactctccggaatcagaa
ggtgggttgtatgtgtgtatgaacacattcctgggcttcggaagagaacatgtggagaga
cattaccgcaaaactggacagagtgtgtacatgcacttaaaacgtaatgtgaaggagaaa
gctacaggtgctgctgggggagctgtgccaagaagacggaatggaaaaatatttttagat
ttagaacttaaccgtgactttaacggggatgattatgaatatgaagacgaagccaagctt
gtcatattcccagaccactatgagatccctttaccaaatatcgaggagttgcctgccctg
gtgacaattgcttgtgatgctgtacttaatgctgcttcagcatacaaaaagcaagagcaa
gattcatgggaggaggagcttcaagtgtccaagcatgccagaggtctcagacaacaagag
aacaggggtcggattcctccaagtggctggaagtgtgccaagtgtgaaatgcgagagaac
ctgtggctgaacctaacagatggctcggtcctctgtgggaaatggttctttgatggaagt
ggcgggaacggacatgcactcgagcactacaaagaaaccaagttcccactagcagtcaag
ttagacaccatcaccccagatggagcagatgtttactccttcgatgaagaagaggcggta
cttgaccctcacatatcagaacacttggcacactttggaatagacatgctaaagatgcaa
aggacagagaacggccaccacacggacaaccacatgcagcctcaagccactgagtctgag
gtgattcaggaatctggccttaagctgaaggcagtctatggttcagggtacacaggcatc
agaaacctgggcaatagctgctacctcagcaccactatgcaagtgctcttcagtatccct
gagtttcagagagcgtatgttggtaatctacagagaatatttgactactcaccccttgat
cctacccaagacttcagcacacagatggccaaactgggtcatggactactttcaggcctg
tattccaaaccaccattgaaatcagaactcattgaacaggtgatgaaagaagaacacaag
cagcagcacagagggattacccccagaatgttcaaggctcttgtcagcaaaggccacccg
gagttctcctcaaacagacaacaagacgcccaagaattcttcctgcattttatcaacctg
gtagaaaggaatagtgctggctcagagaaccccagcgacgtgttccgcttcgttgtggag
gagcgtgtacagtgctgccagtcccagaaagtacgctacacacaaagagtggactacctc
atgcagcttcctgtccccatagaggccgccaccaacagagaagagcttatagcatatgaa
attaagcggaaagatgctgaagaaaacttgcatgctcctcctgatccagtgagggcccgc
attcccttcaccgcctgcctacaagcctttaatgagcctgagaacgttccggacttctgg
agctcggcactgcaggccaagtcagctggagtaaagacttctcgttttgcatcttttcct
gactacatggttgtacagctgaaaaagttcacatttggagtggactgggttcctaaaaag
ttagatatttctgtagacatgcctgactttatggacttgaattggctcagagctacaggg
ctacaagccagtgaagaagagctccctgaccttacacctcctattgtcattcctgaggac
acaagagagaactcagtaaataattctttggaatctccggaaatagatgaggcctctgtg
atgcagttggcagaaatgggcttccctctggaggcctgccggaaggccgtgtactacact
gggaacatgggagctgaaatggcctttaattggatcattgctcacatggaggagccagac
tttgccgagccccttgcaattccttcatacatggaggcagaccttcccagtgccagcttt
cctactgccacccctttggataaccagcctcctgaagaaagcatctccatcctcacctcc
atgggctttcccagacatcacaccattcgagccctgaaggccacgaataataacctggag
cgggctttagattggatctttacacacccagagagtgaggaggagagcgagcctatgtct
gacatggcagacacagagcccaacgatatgagtttctcaaatgccaacacacacagtgac
tccacactgtccccggagcaggaagtgtgtagtccacgtgtacgagatggccctggacgt
tatgaactctttgccttcataagtcacataggaacatcaactatgtcaggtcattatgta
tgtcatatcaaaaaggaaggaagatgggtcatttacaatgatcatagagtctgtttgtca
gaaaagcctccaaaagacttgggttatatttacttttaccggcgcctgcccagctgctag
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