Tachysurus fulvidraco (yellow catfish): 113649412
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Entry
113649412 CDS
T08119
Symbol
brca2
Name
(RefSeq) breast cancer type 2 susceptibility protein isoform X1
KO
K08775
breast cancer 2 susceptibility protein
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd03440
Homologous recombination
tfd03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
113649412 (brca2)
03460 Fanconi anemia pathway
113649412 (brca2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tfd04121
]
113649412 (brca2)
03036 Chromosome and associated proteins [BR:
tfd03036
]
113649412 (brca2)
03400 DNA repair and recombination proteins [BR:
tfd03400
]
113649412 (brca2)
Ubiquitin system [BR:
tfd04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
BRCC complex
113649412 (brca2)
Chromosome and associated proteins [BR:
tfd03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
113649412 (brca2)
DNA repair and recombination proteins [BR:
tfd03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
113649412 (brca2)
FA (Fanconi anemia) pathway
Downstream FA components
113649412 (brca2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCA-2_helical
BRCA2
BRCA-2_OB3
BRCA-2_OB1
BRCA2DBD_OB2
Tower
Motif
Other DBs
NCBI-GeneID:
113649412
NCBI-ProteinID:
XP_047676853
LinkDB
All DBs
Position
11:18490707..18510844
Genome browser
AA seq
2596 aa
AA seq
DB search
MFDDFFHRIETELGPLNSDWFEELTVRASEDGCGNSTAHKDKDKVIFRAPETPVLDSQMC
STPRIFRRRRPLSPASGLEDTPNSGTGRMFPAPPGAESSPCLFDLAKDSQQFHKDWGSLK
TSACLDLLDTPTDLTTQASSAQRISESLGAKLNPDLSWSSSFNTPSLTPTVILSKKTECQ
SSPVSFLRDKEVIIVRKLFPSLSKDSESTSSVQHNDINGGNVHAEKQKSDSSTDNLDGVW
RQTVPDAIKDSDLRNTVESVLDGAEDVLSFFFTDSGSSLRRVKSTERKKRLNGVYKEVKA
DPVTVEHTTDRPSASKTVTGASVANLKSPLFSSQLDNKDFTQWTPLSLSDVQYSKPNQAC
ISEISSKLTSPGVDDHRIAQTFSPDSIREKSQGQISLSEASPALTFSRKPRKFVYRVQNS
DSKKKHNVTDAAVGKHYQEASSHEEDVHTDTGDQSVQPAETTVKQVHPTLLNIDHELDMS
QLCKAFAEDFTQEVNSLKAPQKIAQSSREGVLIPACTVEEINDTQAKAVAAIQCEGHVDR
QTAEVVHFTNTQSFESAVCDDACPTVRSGFSPETLPCNDTEHLYSGFKTANNAIIVVPPE
ALVKAKAALDESSEHTEHLMTHTGTSGVTEPIQAGTNCCKTYKPVIANTAGEKSPSESYH
EAGKETSNESVLRSEEAPANMPSMFMCQTNESGFKTASNKSITVSSVNLEKAKDIFKELD
EEKLDSCPSDNKMQICSINGAKPYKSAQRSTGNDDGSSSLTASQRADVTELCSMLEDAGS
QCEFTQFKHTKMDSKYPDSLQLEREWDPEILAGIDFDDSFNCNLTERQVVKKHQSKADTN
ASVPNGLMNGDVAVQNLNIRKSCLIPWEMQNKADDSVQEKAFCSGFRTAKGNAVTISVKC
LSKARSLFADLEDTERNFSPESDSNADTVKENEDRAGDHQDTVDRRIAVESDLEPKQRIN
ACKGNASSINEEAETCKQMCSKTNLETGQETVDQKPDLNRSSTVSSGFSTAGGKELKISE
NALQNAKELLNELANGKESKYDRFPAETKATSWTSAQNSYDLLADIVAESKTSDGSLPKG
GKEPNFEIGPDTKQATCPTPRSVKSNGFKMANGKEASVSASAIQKSKPIFKDINDCTRSS
DEAKPEETNAKLDLEVDTRQHTFVNGFKMASGKGVSFSEKAFMKAKTFFKNCDPDRVEVS
QVKRDDTSVMDDCGFKAVAGNMVNLPGTDNLNKEALKKDSTDLNKYVQRKFTKTSSETLQ
PPSVCGFSTASGAAVSVSADALQRARAMLDDSNAASPGERRSEISEASILSKNEAVVAGK
TYGFSTASGRKVAVSEKALQKAWSLFTDCDVDGLGPDPCNLSAPKTSAAGSEPTHELLFN
AARNKNGVSEKEPNRGKDVSVGSDDGSVQHGSYSGEALCAKNASVPDNAGKSEGRYENMI
NGGPKADHSGSGNCGFSTASGKGVCVSKSALAVAYEMFRDCDAQTVTNSTITNDAPSTAI
DKKPIESETKATNPPHPSSPAAQDNPSLLSCHSLNLDGCTVTQQKYFEQEAMACTKALLE
DDLNESGLMSSLDSDVRQSPAQHQEIRLGVNTGIRKRPSDDELLTGQPPLKRRLVSEFDQ
ISDDGTACAPVKSSPNGTLSDRRVFKYNLKPNITYPSRTVMDQASANQGHLKRRSSDPKA
PVFIPPFRKNLKEETPQTRVPTAVAQVPSVFVPPIKKRATSGNVYVKDSPLISADSPAIT
SSSCESSKYHSARNTDKQKTEETKREEMLENDTTVLGETNIIWQQSLELARDIQNMRVRK
KKYQRVRPLPGTFYLAKTSGVSRISLKEAVGYKCPELHTENQLYQHGVSFNVSQITSENA
ESFRFSCDEFFKREVLRDTGGIQLADGGWLIPDNKGMLGKEEFYRALCDTPGVDPKLISE
AWVYNHYRWVVWKRASMERAFPEILGGRCFTPEQVLLQLKLRYDVEVDHSKRSALKKIIE
RDDTPAKTIVLCVCGIAKDDQSLVRTKEATNTTDTKPESPAAVIWLTDGWYPIKALLDVP
LSTMLRKGRLRVGVKLLIHGAELIGSQDACPPLEAPESLMLKIPANSTRRARWDTKLGFY
KDPRPFPLLLSALYANGGVVSRVDITVLRSYPIQWMEKKPGSVFVFRNERAEVREVAGYN
RTKEKTLEHLFSKIQAQIEKEEEEKRKTRRGRTFSLHEIKNLQEGEEIHEAMESDPALVE
AHLSTQQVKAVSSYRQVLTERKRAELQDRVHKAVQEAEGGCANRDVTPVWKLSIADANDL
HSSCVYTLNIWRPSLDLQSLLREGRRYKAYHLATSETKKRSGTSNIQFTATKKTQFQDTE
VCPQWLSLHFPARQSVKFGDLQSPGFSSPCGEVDLVGYVVSISDRQGTSPVLYLVDEKFD
FVSVRICSSLALLALEDLVKPLALLAVINLQLRQQSGPVPSLYAGEQALFSTNPKEAYLQ
KDIARLKTFAEDYEHFFIVAEEKLSNLIPTGFLNSCESPRTPGLPSVPKSNLRNNASRVF
SPFTPVTKRAPIPTGNSDTKDPRSVKRKRGMENLSRLQNPAPLVPLGMVRSPRISKTFNP
PRRCETPRNPQTAPTP
NT seq
7791 nt
NT seq
+upstream
nt +downstream
nt
atgtttgacgacttcttccatcgaattgaaactgaacttgggccactaaattcagactgg
tttgaagagttgactgtgagagcttctgaagatggctgcggtaactccacagcacataag
gacaaggacaaggtcattttcagagctccagagacaccagtcttggacagtcagatgtgt
tcaacacccagaatatttaggcgcagacggccactttctcctgcctcaggtcttgaagat
actcccaattcagggacggggagaatgtttcctgctccaccaggtgcagaatcaagccca
tgtctgtttgacttagctaaagacagccagcagtttcataaagactggggatcattaaag
acaagtgcatgcttggatctacttgacacaccaacagatttaacaacacaagcctcatct
gcacaacgcatcagcgagagcctcggagctaaattaaaccccgatctatcttggagcagt
tcctttaacacaccatcattgacccccaccgttattttatccaaaaaaacagaatgccag
tcttcaccagtaagttttctcagagacaaagaagtcattattgttcgaaagctgtttcca
tcactctcaaaagattcagaatcaacatccagtgtgcagcacaacgacataaacggtggg
aacgtccacgcagaaaaacaaaaatctgattcatccactgacaacttagatggtgtttgg
aggcagacggtaccggatgcgattaaggacagcgatttgcggaacacagtggagagcgtc
ctcgacggagccgaggacgtgctgtccttcttcttcacggacagcggctcctcactgcga
agggttaaatccacggaaaggaaaaagaggttgaacggtgtttataaggaagtaaaggca
gatcccgtgacagtagagcacactacagatcgtccatccgcatcaaagacagtgaccggt
gcttctgttgcaaatttaaagtcccctttattttcaagtcagcttgataataaggatttt
acacagtggaccccgctaagtttatctgatgttcaatactcaaagccaaaccaagcgtgt
atctctgaaatctcaagtaaactcactagtcctggagtggatgatcaccgtatcgcacag
acgttctctcctgattcgattcgtgagaagtctcaggggcaaatctctttatcggaggca
tctcctgcacttaccttctcaagaaaacccaggaaatttgtgtatcgagtgcaaaattca
gatagtaaaaaaaagcacaatgtcactgatgctgcggttggaaaacactaccaggaagct
tccagtcatgaagaggatgtccacacggacaccggagatcagtcggtccagccagcagaa
actaccgttaagcaggtccatcctacacttcttaacatagaccatgagctcgatatgtct
cagctttgcaaagcgtttgcggaggatttcactcaggaagtgaactcgttaaaagcgcca
caaaaaatcgcacagagcagccgtgaaggtgttttaatcccagcttgcactgtagaagaa
ataaacgatacgcaggctaaagcagtagctgcgatacagtgcgaaggtcacgtagaccgt
cagacagcagaagtcgttcatttcacaaatacacaatcctttgagagcgcagtctgtgac
gatgcctgtcctacagttcgttctggttttagcccggaaacgttaccatgcaacgacacc
gaacatctttattctggatttaaaacagcaaataatgcgattattgtagtaccacctgaa
gctttagtgaaagccaaagcagcgttagacgaatcctcagagcacacagagcacctcatg
actcacacaggcacttcaggcgtaaccgaaccgatacaagcaggtacaaactgctgcaaa
acttacaaacctgtaatagcaaacactgctggagagaaatcgccttcagaaagctatcat
gaagctggaaaagaaacttctaatgaaagcgttttaaggtctgaggaagctccagcgaat
atgcctagcatgttcatgtgccaaacaaacgaatctggcttcaaaactgcgtctaacaaa
agtataactgtctcatctgtgaatctcgaaaaagctaaagacattttcaaggagttggat
gaagagaagttagattcatgtccgtcggataacaagatgcagatctgcagtataaacggt
gccaagccgtataaatctgcacaacgttccaccggcaacgatgacggaagttcatctttg
acggcttcgcaaagggcggacgtgaccgagctgtgtagtatgttagaggacgcaggcagc
cagtgtgagtttacacagtttaaacacacaaagatggactcgaaatatccagatagcctg
cagctggagcgagagtgggaccctgagatacttgctggtattgactttgacgatagcttt
aactgcaatttaaccgagaggcaggtcgtaaaaaaacatcagtccaaggcagatacgaac
gcttcggtcccaaacggcctgatgaatggagacgtggccgttcagaatttaaatatcagg
aagtcttgtcttattccatgggaaatgcagaataaggctgatgacagtgtgcaggaaaag
gctttttgttctggctttagaactgcaaagggaaatgctgtgaccatctctgtgaaatgt
ctgagcaaggccagaagcctttttgcagatctagaggacacggagagaaactttagtccc
gagagtgacagcaatgcggataccgttaaagaaaacgaagatcgagcaggtgaccaccag
gacacggtggatcgcaggatcgcagtggaatcagatctcgaaccaaaacaaaggataaat
gcgtgtaaaggaaacgcgagctcaataaacgaagaggctgaaacgtgtaaacagatgtgt
agcaaaacaaatctggaaacaggacaagaaactgtagatcagaaaccagatttaaatcgg
agcagcacggtaagttctggatttagtaccgctggaggaaaggaattaaagatctcagaa
aacgctcttcaaaatgcaaaggaacttttaaatgaacttgcaaatggcaaagaatccaag
tatgaccgtttccctgcagaaacaaaagccacctcttggacttcagctcagaattcttat
gatttattggcagacatagttgctgaatcgaaaacgtctgatggatctttaccaaaaggt
ggaaaagaacccaattttgaaatcggccccgacacaaaacaggcaacgtgtccaactcct
cgatccgtcaagagtaatgggtttaaaatggccaacggcaaagaagcgtctgtctcagca
agtgcaattcaaaaatcaaaacccattttcaaagatattaatgactgcacgagaagctcg
gatgaagcgaaacccgaggaaacgaacgcaaagctggatctcgaagtagatacacgccag
cacacgtttgtcaacggattcaagatggcaagtgggaaaggagtgagtttttctgaaaaa
gcgtttatgaaagccaagacgttttttaaaaattgcgatcccgatcgtgtggaggtttct
caagtaaaaagagacgacacaagtgtgatggatgactgtggcttcaaggcagttgcggga
aacatggtgaatttgcccggaacagacaatctgaacaaagaggccttaaagaaagactcc
acagatttaaataaatatgtccaaaggaaattcactaaaacctcctctgagactcttcaa
ccaccatctgtctgtggtttcagtacagcaagcggtgctgcggtgtccgtttcagccgac
gcacttcagagagcaagagctatgttggatgattcaaatgctgcttcacctggtgaaagg
agatcggaaatatcagaagcaagcattctttccaaaaacgaggccgtcgttgcgggaaaa
acctacggctttagcacagcaagcggaaggaaagtcgccgtttctgagaaagccctccag
aaagcgtggagtctttttactgactgtgatgtggatggattaggacctgatccctgtaat
ttgtcagctccaaagacatcagcagcaggttctgaacctacacacgaattgcttttcaat
gccgccaggaacaaaaacggcgtgtcagaaaaggagccgaacaggggtaaggacgtgtcg
gtcggtagtgacgacggttcagtacaacatggaagttatagcggtgaagctttgtgtgct
aagaacgcaagcgtgccagataatgccggaaaatccgaaggaagatatgagaacatgatt
aatggaggcccaaaggctgatcactcgggatcaggaaattgtggctttagcacagccagc
ggaaaaggtgtttgcgtgtcaaaatcggccctcgcggtagcgtacgagatgttcagagat
tgtgatgcccaaacagttactaacagtacaattaccaatgacgctccatctacagctatt
gacaagaaacctatcgagtcagagaccaaagccactaatccacctcacccgtcatcaccg
gccgctcaggataatccttccctgctgagctgccattctttaaatcttgatggatgcact
gtaacccagcaaaaatattttgagcaagaagcaatggcttgcaccaaagcactcttagag
gatgatctcaacgagagtggtttgatgagtagcttggactctgacgtcaggcaaagtcct
gcacaacatcaggagatacgcttaggggtgaacacaggaatacgaaagcggccgtcggat
gacgagcttttgacaggccaacctcctttgaaaagaagacttgtttcagagtttgaccag
atctcagacgacggaacagcctgcgctccagtgaaaagcagccccaacgggaccctgagt
gacagaagggtcttcaaatacaacttgaagcccaatatcacttatccgtccaggactgtc
atggaccaagcatcagccaaccaaggtcacctcaaaaggagatcctcagaccccaaggct
ccagtgtttataccaccttttcgaaaaaacctcaaggaggaaacgccacaaacccgtgtt
cctacagctgtggcccaagttcccagtgtgtttgttccacccattaaaaagagagctaca
tcaggtaacgtttatgtgaaggattcaccactgatttctgccgattccccagccatcaca
agctctagctgtgaaagcagcaagtatcattcagccagaaatacagacaaacagaaaaca
gaagaaaccaagagagaggagatgctggaaaacgataccactgtccttggggaaacaaac
atcatttggcagcagtctttggagttagcacgagatattcagaacatgagagtcagaaaa
aagaagtatcagagagttcgacctctacctggcactttttacctggctaagacgtccggg
gtgagcagaatttccctgaaagaggctgtagggtacaagtgtcctgagctccacacagaa
aaccagctctatcagcatggcgtatccttcaacgtgtcccagataaccagcgagaacgca
gagtcgttccggttcagctgtgacgagtttttcaaacgtgaggttctccgagacaccgga
gggatacagctggctgacggtgggtggctgattccagacaacaagggaatgctgggtaaa
gaggagttctacagagccttatgtgatactcctggtgttgaccccaaactgataagtgaa
gcatgggtgtataaccactatcggtgggttgtgtggaaacgcgcctccatggaaagagcc
ttcccagaaatactgggcggtcggtgtttcactccagagcaggtgcttctacagctcaaa
ctcaggtatgacgttgaggtggaccacagtaaaagatcagccctgaagaagattatagag
agagacgacacaccagccaagaccatagtgctttgtgtgtgtggaattgccaaagatgac
caaagtttagtcaggacaaaggaagccacgaacacaacagatacaaaacccgagtcaccc
gctgcagtcatatggcttaccgacggctggtatcccatcaaagcgctactggacgtacct
ttgtctaccatgctgagaaaaggccgtctccgagtgggtgtgaaacttctgatccacggc
gcagaattaatcggctctcaagacgcctgtcctccgctagaggctcctgaatcactcatg
ctcaagattccggcaaacagtacaagacgagctcgctgggacacaaagctcggcttctat
aaagaccctcgacccttcccactgttgctttcagcactgtatgctaacggaggagtggtg
agtcgtgtggacatcaccgtgttaaggagttacccaatacagtggatggaaaagaagcca
ggttctgtctttgtgtttcgcaacgagcgagctgaagtcagagaagtagcaggatacaac
aggaccaaagagaagacattggagcaccttttctccaaaatacaagctcagatagagaaa
gaggaagaagaaaagaggaaaaccaggagaggcagaacatttagtctgcacgagatcaag
aacctgcaggaaggagaagagattcatgaagcgatggagagcgatccagctttggtggag
gcacatctaagcacccagcaggtgaaagctgtgagtagctacaggcaagttttaaccgaa
aggaagagagcggagttacaggaccgggtgcacaaggctgtacaggaggctgaggggggc
tgcgctaaccgagacgttactcctgtctggaaactgtctattgctgatgctaatgattta
cacagcagctgcgtatacacactgaatatctggcggccttctttggacttgcaatcctta
ctgcgagaaggccgcagatacaaagcttatcacctggccacatcagagaccaagaaacgc
tccggaacttcgaacatccagtttacagctaccaaaaaaacccagtttcaagacactgag
gtttgtccacaatggctaagtttacattttcctgcaagacaatcggtgaaattcggagat
cttcagagccccggattcagctctccgtgtggagaggttgaccttgtgggctacgtcgtt
tctatctcggacagacaaggtacttctcctgtgttgtacttggtggatgaaaagtttgac
tttgtctctgtgaggatctgtagcagcctggcacttcttgctctggaggacctggtaaag
ccattagctctactggctgtaatcaacctgcagctccgacagcagtctggcccagtcccc
agcctttatgctggagaacaagcactattctctacaaaccctaaagaagcctacttacag
aaagatattgctcgtctgaagacgttcgctgaggattatgagcatttcttcatagtcgct
gaagagaagctctcgaacctgattccaacaggtttcctgaactcttgtgagtccccaaga
actccaggtttaccctcagtgccaaaatcaaacctcaggaataatgcaagccgagttttc
tcccctttcactcctgtgaccaaaagagcccctatacccaccggaaactccgacactaag
gaccccaggagtgtgaaaaggaagcgtggtatggagaacctttcacgccttcaaaaccca
gcacccctcgttcctctgggaatggtccgctctcccagaatcagcaagacttttaaccct
cccagaaggtgcgagactcctcgtaatccacagacagcaccaactccataa
DBGET
integrated database retrieval system
