Tachysurus fulvidraco (yellow catfish): 113655404
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Entry
113655404 CDS
T08119
Symbol
col21a1
Name
(RefSeq) collagen alpha-1(XXI) chain isoform X1
KO
K16629
collagen type XXI alpha
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
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Gene cluster
GFIT
Motif
Pfam:
Collagen
VWA
VWA_2
Laminin_G_2
Motif
Other DBs
NCBI-GeneID:
113655404
NCBI-ProteinID:
XP_027021718
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Position
4:6374687..6416496
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AA seq
986 aa
AA seq
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MATGSYKWWYKTEAWCFWIVGCKMRSMHYVFWCLYFIFLHLFCTAQDEDMRLSCRTAQSD
LVFILDGSWSVDDTNFEIVKRWLVNITTSFNIGQKFTQVGVVQYSDEPVLHIPLGKHYST
KDLIKAMESIEYMGGNTNTGKAIKFANEKLFALSERGPNGASKIAVVLTDGKSQDAVLEA
AEAARKKGIILFAIGVGAETEETELRTIANKPPSTYVFYVEDYKAISKIREVIRQKLCEE
TVCPNKIPIDSRDEKGFDILFHLKLAKKAKKTQGSFYGMKAYQVTSRDDLTENTRALFPD
GLPPSYVFVATLKYKGSVLTEDWDLWRIQTMDGEPQMAVTLNGMKRTVTFTTTSTAQSGT
QTVVFTKTPAKKLFDEKWHQLRLLVTEEEVSLYVDDLEIENLPLEPPAGIFINGKTQVGK
YVRKETTVPFEIQKLRIYCDPEQNNRETACEIPGVDGECASGSADIDPTPEPCICPPGAP
GTPGQKGEPGRPGDPGKPGHTGADGKPGTPGPRGTTGLQGPPGMAGLRGADGYKGEKGSS
GEPGERGVPGLPGPPGEPGEKGATGSQGAQGMSGKDGQQGEKGNAGSVGSPGYPGQPGTH
GRDGKDGIPGVPGQKGDTGAPGIPGLDGRQGHPGLPGMPGAEGPRALKGEAGLPGAKGAK
GSSGDNGEMGLPGIPGSPGIPGPKGSKGDNGVPGQAGLPGQQGQPGQAGNPGETGYPGMP
GVKGSKGEIGAQGAKGVEGLKGDKGDAGNSGQNGLTGLTGQKGEKGTTGEPGQRGQIGHQ
GQPGQTGQPGSPGSRGHSGDTGQPGLPGPAGRPGREMSEERIQQICREVLRSEIPSLLLN
NQQSQQRSCTHCHTRMGPPGPAGPIGLQGSRGFPGAPGSHGLQGHRGLPGRPGIPGMKGD
PGEKGEKGNQGRSGIGDPGQQGPPGPAGPPGIGKPGHPGTSGSPGRDGEGGKRGYPGEPG
PPGVCHPSMCYSAVLRRDPFVKGPNY
NT seq
2961 nt
NT seq
+upstream
nt +downstream
nt
atggcgactggctcatacaaatggtggtacaaaactgaggcttggtgcttctggatcgtt
ggatgcaaaatgagatccatgcattatgtcttttggtgtctgtacttcatttttcttcac
ttattttgcacagcccaagatgaggacatgagattaagttgtcgaacagcacagagtgac
ttagtattcatccttgatggctcatggagtgtggatgacacaaattttgaaattgttaaa
cggtggctggtgaacatcacaacgagctttaacattggccagaagtttacccaagttggg
gtcgtccagtacagtgatgaacctgttttacacataccattgggaaaacattactcgacc
aaagaccttatcaaagccatggagtccatagaatacatggggggcaacaccaacactgga
aaagcgatcaagtttgccaatgagaagctgtttgcactgtcagagcgtggcccaaacggg
gcttcaaaaattgctgtggttctgacagacgggaagtcacaagatgcagtgcttgaagct
gcagaggccgcgaggaaaaaagggataatactctttgcgattggtgttggggcagagaca
gaagagacagagctgagaacaattgccaacaagccaccttcaacctatgttttctatgtt
gaagactataaagcgatctctaagattcgtgaagttattcggcagaaactgtgtgaagaa
actgtatgtccaaacaaaataccaattgactctcgagatgagaagggatttgatattctg
tttcacctgaaattggccaaaaaagctaaaaagacacaaggatcgttttacggaatgaaa
gcctaccaagtgacgtccagagatgatttaacagagaataccagggctttgtttcctgac
ggacttccaccttcttatgtgtttgtggccacacttaagtacaagggctccgtgctaaca
gaggactgggatctctggagaatacagacaatggatggagagcctcaaatggcagttact
ttaaatggcatgaagaggacggtcacattcacaactacaagcactgctcaaagcggaaca
cagacggtggtcttcaccaaaacgccagcaaaaaaactgtttgatgaaaaatggcaccag
ctgcgtcttctggtaacagaggaagaggtatctctttacgtcgatgacttggaaattgaa
aacctgcctctcgaaccccctgctggcatttttatcaatggaaagacacaagttggaaaa
tatgtcagaaaagaaacaacagttccttttgaaattcagaaactacgaatctactgtgac
ccagagcagaataacagagaaactgcttgtgaaatacctggagttgatggagagtgtgcc
agtggatcagctgatatcgatccgaccccagagccgtgtatctgtccacccggggcacct
ggtactccaggccaaaagggagagccaggaagacctggggatcctggcaaacctggtcat
actggtgctgatggtaagcctggtactccagggccaagaggaactactggccttcaaggt
cctcctggcatggcggggcttcgcggagcagatggatataagggggaaaaaggaagttct
ggggagcctggtgaaagaggtgtcccagggttacctggccctccaggtgaaccgggtgaa
aagggggcaactggctctcaaggtgcacaaggaatgtcaggcaaagatgggcaacagggt
gaaaagggaaacgccggatctgtgggctcacctggatatccagggcaacctgggacacat
ggaagagatgggaaagatggaattccaggagtgcctgggcaaaagggtgacacaggagct
cctgggattcctggtctagatggaagacaaggacatcctggactgccaggaatgcctgga
gctgaaggtccaagggctttaaagggggaggcaggattacctggagcaaagggagcaaag
ggcagctcgggggacaacggcgagatgggtttgcctggaatacctggttcacctggaata
cctggacctaagggcagcaaaggagacaacggagtgccgggtcaagcagggctacctggt
cagcagggccaacccggacaagcagggaacccaggagagacgggatatcctggaatgcct
ggtgtaaagggatctaagggggaaataggagcccaaggtgcaaaaggggtagaggggctg
aaaggtgacaaaggagatgcaggaaattccggtcaaaatggtttaactgggctgacagga
caaaaaggagagaaagggacaacaggagagcctggccagaggggacaaataggccatcaa
ggacagccagggcaaacaggacagccaggttctcctggttccagaggacacagcggggac
accggacaacctggactacctggacctgcaggacgacctgggagagaaatgtccgaggaa
cgcattcagcagatatgcagagaggtccttcgatcagagattccctcacttcttcttaat
aaccaacaaagtcaacagagaagttgcacacactgccacacaaggatgggacctcctggg
ccagcagggccaataggtctccagggttccagaggttttcctggagcaccaggatcacac
ggattgcagggacatcgaggtttacctggacggcctggtattcctggcatgaaaggtgat
ccaggagaaaagggtgaaaaaggaaatcaaggacgatcaggaattggagacccaggtcaa
caaggtccaccaggtccagcgggtcccccaggtatcggaaaacctggtcatccgggcaca
tccggctcgcctgggcgtgatggggaaggtggaaagagaggatatccaggagaacctggg
ccaccaggtgtgtgtcatccatccatgtgttatagtgcagttttaagaagggaccctttt
gttaaagggccaaactattga
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