Tachysurus fulvidraco (yellow catfish): 113656378
Help
Entry
113656378 CDS
T08119
Symbol
tent4b
Name
(RefSeq) terminal nucleotidyltransferase 4B isoform X1
KO
K03514
non-canonical poly(A) RNA polymerase PAPD5/7 [EC:
2.7.7.19
]
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
113656378 (tent4b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tfd03019
]
113656378 (tent4b)
03016 Transfer RNA biogenesis [BR:
tfd03016
]
113656378 (tent4b)
Enzymes [BR:
tfd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
113656378 (tent4b)
Messenger RNA biogenesis [BR:
tfd03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
113656378 (tent4b)
Transfer RNA biogenesis [BR:
tfd03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
113656378 (tent4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAP_assoc
NTP_transf_2
Polbeta
TUTase
PAP_NTPase
Motif
Other DBs
NCBI-GeneID:
113656378
NCBI-ProteinID:
XP_027023436
LinkDB
All DBs
Position
1:3307597..3322996
Genome browser
AA seq
678 aa
AA seq
DB search
MDPRIAWFQPEQRGPANSLWMQIWETTQGLGNLYFHGNGNSNSSAGASIVTAGSGGGGGG
GGYSSSPKPSGDTTGAGQHDCAEHKHRVMSGEISEQRDFIPLDSNNANNNHYNQRIAAAA
GRGGAGGACSGAQDAAAQRNKRKRDNKASTFGFNQSLLFNGYRGTDTGPYHGTPWKRRNY
SGGIVGLHEEIKDFYEYISPRPEEDRMRLEVVDRIQKVIKDLWPSADVQVFGSFSTGLYL
PTSDIDLVVFGNWETLPLWTLEEALRKRNVADENSVKVLDKATVPIIKLTDARTEVKVDI
SFNVHSGVNAANLIKDFKKKFPVLPYLVLVLKQFLLQRELNEVFTGGIGSYSLFLMAVSF
LQLHYREDVCSPNSNMGVLLIEFFELYGRHFNYLKTGIRIKDGGSYVAKDEVLKGMLDGY
RPSMLYIEDPLQPGNDVGRSSYGAMQVKQAFDYAYVVLSHAVSPIAKHYPNNKSESILGR
IIRITREVAEYRDWINEHWGGQSQTEEALNCNGNDVTLLVEPQELDECNNNLRDEIVVLP
PAPRSKASSNSSSPPPSSPSSPSSSSSPSPSSTTSSDADSDGTPCKTVKQLPGRGSGAHR
DNTERNLSNHRAQCHPMTTPNTGHKGSKQSRQFRPNKSSPAQQSISNSKSHQSSKAHHHA
AGKRRKNQREAAHEDLCR
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atggatcctagaatcgcctggtttcaaccagaacagcgcggacctgctaacagcctgtgg
atgcagatttgggagacgacgcagggcctcggaaacctgtactttcacggtaacggaaat
agcaacagcagcgcgggggcatcgatagtaacagcgggtagtggtggtggaggaggtgga
ggaggatacagctcgagccccaagccgagcggagacaccactggggccggacagcacgac
tgcgccgagcacaaacaccgagtcatgtctggggaaatctcggagcagcgggacttcata
ccgttagacagcaataacgccaacaacaaccactacaaccagcggattgcggcggctgca
ggccggggcggcgccgggggagcgtgtagcggggcgcaggacgcagcggcgcagcgcaac
aagcgcaaacgggacaacaaggcgagcacattcgggttcaaccaaagtctcttattcaac
ggatacaggggcacagacacgggcccctaccacgggacaccgtggaaacgtagaaactac
tccgggggaattgtagggctccatgaggagatcaaagacttctacgagtacatctctcct
cggccagaggaagatcggatgaggctggaagtcgtcgacagaattcagaaagtcatcaag
gacctgtggcccagtgcagatgtccaagtctttggcagtttcagcaccggactgtatttg
cctacaagtgatatagacctggtagtgtttggaaactgggagacgcttcctctgtggacg
ctggaggaggcgctgcgcaagagaaacgttgctgacgagaattcggttaaagtgctcgat
aaagcaacggttccgattatcaaactgacagacgctcgcactgaggtcaaagtggacatc
agttttaatgtgcacagtggtgttaatgctgccaatctcatcaaggacttcaaaaagaaa
ttccctgtgttgccgtacctggtgctggtgctaaaacagttcctgctgcaaagagagctg
aatgaggtgtttactggaggcattgggtcctacagcttgtttctcatggctgtcagtttc
ctacagctacactacagagaggacgtgtgcagtcccaactccaacatgggcgtcctgctc
atagagttcttcgaactgtacggccgccattttaactacctgaagacgggcatcaggatt
aaagatggcggctcatacgtagccaaagacgaggtgttgaaaggcatgctggatggatac
agaccgtccatgctgtacatcgaagatccactgcagcctggcaatgatgtgggaaggagt
tcatatggagccatgcaggtgaagcaggcattcgattatgcctacgtggtcctgagccac
gccgtctctcccatcgccaagcactaccccaacaacaaatctgaaagtatcctgggtcga
ataatccgcatcacgagggaggtagcagagtatcgcgattggatcaacgagcactggggc
ggacagtcgcaaaccgaggaggccctcaactgcaacggaaatgatgtcaccctcctggtg
gagcctcaggagctggatgagtgtaacaacaacttgcgtgacgagatcgtggtccttcct
ccggcgccgaggagtaaagcgtcctccaactcctcctccccgcctccttcctcaccttcg
tcgccctcttcgtcctcgtcgccttctccgtcatctacgacttccagcgatgcagattcg
gacggaacgccgtgcaagacggtgaaacagctgcctggccggggctccggcgctcacaga
gataacacggagaggaatctgtccaatcacagagctcagtgtcatcccatgaccacaccc
aatacaggccacaaaggcagcaagcagagccgacagtttcgcccgaacaaaagctctccg
gcgcaacagagcatctcgaacagcaagagccaccaaagcagcaaggcccatcaccacgcc
gccggaaagagacggaaaaaccagcgtgaggcagcgcacgaggacctgtgcagatag
DBGET
integrated database retrieval system
