Thermosipho ferrireducens: JYK00_09165
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Entry
JYK00_09165 CDS
T07656
Name
(GenBank) ATP-grasp domain-containing protein
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
tfe
Thermosipho ferrireducens
Pathway
tfe00470
D-Amino acid metabolism
tfe00550
Peptidoglycan biosynthesis
tfe01100
Metabolic pathways
tfe01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
tfe00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
JYK00_09165
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
JYK00_09165
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
JYK00_09165
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
tfe01011
]
JYK00_09165
Enzymes [BR:
tfe01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
JYK00_09165
Peptidoglycan biosynthesis and degradation proteins [BR:
tfe01011
]
Precursor biosynthesis
Amino acid ligase
JYK00_09165
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
ATP-grasp_3
ATP-grasp_4
GARS_A
ATPgrasp_Ter
Motif
Other DBs
NCBI-ProteinID:
QTA37875
LinkDB
All DBs
Position
complement(1870449..1871378)
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AA seq
309 aa
AA seq
DB search
MRIAVVHDCDISDEERLMVDSVYSAISKKYDCVKIAFDDDFVKKIKNFDYVFNLSNKGGK
ETKQMHVPAVLDKLGIPYTGSNAYSHAVCLDKITTKIILRHYGIPTPDFEVYNIGDTPID
IKKVSIVKPSREGSAKGITRDSVVDNIEDLRKQVEKVHREFKQPALVEEFIDGIEVSVGL
IGNNKNLEVLPILEIDFSTLPENLERFYSYEVKHYYGEQTNYVCPARIDKNVEEKLKDYA
RKVFKVLSLKDYARMDVRIRDDEIYFLEINSLPQLVPVYSDITKMAEAAGYSYDELILKI
LEVSFKRNK
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgagaattgctgtagtgcatgactgtgacataagcgatgaagaaagattaatggttgat
agcgtttattcagccatctccaagaaatatgattgtgtaaaaatagcgtttgatgatgat
tttgttaaaaaaattaagaattttgattatgtatttaatctatccaataagggtggaaag
gaaacaaaacagatgcacgttcccgctgttcttgataaacttggaataccatacacaggt
tctaatgcttattcgcacgctgtctgtctggataaaattacaacaaaaattattttaagg
cattatggaattcccacacctgattttgaagtttataatatcggagatactccaatagat
ataaaaaaagtgtctattgtcaaaccctcaagagaaggaagtgccaagggaataacaaga
gattctgtggttgataatatagaagatttgagaaaacaggtagagaaagttcatcgagaa
tttaagcaacctgcgcttgttgaagagttcattgatgggatagaagtcagtgttgggttg
ataggtaataataaaaatcttgaagttttgccgattcttgaaatagatttttctacttta
cccgaaaatttagaaagattttattcttatgaggtaaaacattattatggggaacaaaca
aattatgtgtgtccagcaaggatagataaaaatgtagaggaaaagttaaaagattatgca
agaaaggtttttaaagtgctgtctttaaaggattatgccagaatggatgttagaataaga
gatgatgagatatatttccttgaaattaattctttaccccagcttgttccggtgtattct
gatataacaaaaatggcggaagcagcaggatattcttatgatgaattaattttaaagata
ttagaagtatcatttaaacgcaacaaatga
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