Tepidiforma flava: O0235_03320
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Entry
O0235_03320 CDS
T08993
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
tfla
Tepidiforma flava
Brite
KEGG Orthology (KO) [BR:
tfla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tfla03400
]
O0235_03320
Enzymes [BR:
tfla01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
O0235_03320
DNA repair and recombination proteins [BR:
tfla03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
O0235_03320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
Motif
Other DBs
NCBI-ProteinID:
WBL36598
UniProt:
A0AA49E8W9
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All DBs
Position
518956..522237
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AA seq
1093 aa
AA seq
DB search
MTLPDAAARERVTRETAQTLFVEAAAGAGKTTALVGRIVELVAGGMPVERIAAITFTEKA
AAELTDRVRERLERAAAGDGEYARLGPEERERCRAAIGGLDGASFQTIHAFARKLLAAHP
VQAGLPPEFDVLDGTEEELELREAVRRFLDEVERSDATRTAVMTAYALGLQPGRLRELAR
EFARNWDRLRGGEFDLPAAEPDWEPPLGRLLDAVNQNGQSDSFQPAFDGLLEVAGRLERA
YRQVQAAESAAEREAGLAEVLTLAGRVKIPLNAGRQGTFRPVKDGWDAWLTEVRRWALAR
LLPAVQAFALDYAAERRRRGRLTFHDLLVLTTDLLREDETARRAVHGRFGQLLIDEFQDT
DPPQVELAALIAADPGQPADWQTADVAPGRLFFVGDPKQSIYRFRRADIRIYEQAKRAFG
SQEVQLVTNFRSAKSVIAWVNGVCRRLFEADAAGAQAGWADLEARPGAPDGKPVRVFGGL
VEDAAAAEVQEREAADVALGVLQARAENWGGREGGTRFEDIAILLPRRTVLGALERALAD
RGIPYRVESQSLLYAAEEIRDLLNVLTAIDDPTDEIALVAALRSPLFACTDRELAEHAAA
GGRWSYERPAPDGSPERVRRAMAQLAAWHRERWTVSPAGLIERLIAESHLLLKALGDTRP
RETWRRYRIIAEQARALTVRGAVATLRQFTAWLEQQQDEGVRVNEAIAPEPDDDAVRVMT
IHAAKGLEFPVVFVAGLGTGTNRSPSIRTWWPPHGDGGLPEVRCGSGDQRFETAGFAAVE
DEEKAHEEAEAARLFYVAATRAQQALAVSLYRTKRSDGGSLAGRVEAALEAAPAGTFERF
TPKPAEVPGVRARPGEPPPVPAADAWRERRESAAKCAAAPVAAATAIAHAAAPGAPEEPE
EPPATPAEPWRKGRAGTAIGRAVHAVLQGIDLGTGEGLEAAAAAQAEAEGIADRADEVKR
LAGNALASAAVQAAVASGRYWREVYVGADVGGVLVEGFIDLLYEGQDGLVIVDYKTDGLR
SAAEADRVMPQYRLQAGAYAAALEQAAGLAAAAAVFVFTEPSIERRVDDLAAAKAEALER
ARELAGLAASAGG
NT seq
3282 nt
NT seq
+upstream
nt +downstream
nt
atgacgctgccggatgctgcggcgcgggaacgggtgacccgggaaacggcgcaaacgctg
ttcgtggaggcggcggcgggcgcagggaagacgacggcgctggtcggtcgaatcgtcgag
ctggttgcaggcgggatgccggtcgaacgcatcgccgcgatcacgtttaccgagaaggcg
gcggccgagctgacggaccgggtgcgggagcggctcgagcgggcggcagcaggagacggc
gaatatgcccgcctgggcccggaggagcgggagcggtgccgggcggcgatcggcgggctc
gacggcgcgtcgttccagacgatccacgcgttcgcgcggaagctgctggccgcgcacccg
gtgcaggcgggcttgccgccggagttcgacgtgctggacgggacggaggaggagctggag
ctgcgcgaagccgtgcgccggttcctcgacgaggtcgagcggagcgacgcgacgcggacg
gcggtgatgacggcgtacgcgctgggcctgcagccggggcgcctgcgggagctggcgcgg
gagttcgcgcggaactgggaccggctccgcggcggggagttcgacctgccggctgccgag
ccggactgggagccgccgttgggccgcctgctcgatgctgtgaaccagaatgggcaatcg
gacagcttccagccggcattcgacgggctgctggaggtcgccgggaggctggagcgggcg
tatcggcaggtccaggcagcggaaagcgcggccgaaagggaggccgggctggccgaggtg
ctgacgctggccgggcgagtgaagattccgctgaacgccgggcggcagggaaccttccgc
cctgtcaaagacggctgggacgcgtggctgacggaggtgcggcggtgggcgctcgcgcgg
ttgctgcccgccgtgcaggcgttcgcgctcgactacgcggcggagcggcggcggcgcggc
cggctgacctttcacgacctgctggtgctgacgaccgacctgctgcgggaggacgagacg
gcgcggcgggcggtgcacgggcggttcggacagcttctcatcgacgagtttcaggacacc
gacccgccgcaggtcgagctggcggcgctcatcgcagcggaccccggccagccggcggac
tggcagacggcggacgttgcacccgggcggctgttcttcgtgggcgacccgaagcagtcg
atctaccgattccggcgggcggatatccgcatctacgagcaggcgaaacgcgccttcggg
tcgcaggaagtgcagctggtgacgaacttccgctcggccaaatccgtcatcgcgtgggtg
aacggggtgtgccgccggctgttcgaagcggacgcggccggggcgcaggccgggtgggcc
gacctcgaggcgcggccgggggcaccggacgggaaaccggtccgggtcttcggcgggctc
gtcgaggacgccgcggcggccgaggtgcaggagcgcgaagcggcggacgtcgcgctgggg
gtgctgcaggcgcgcgcggagaactggggcgggcgcgaaggcggcacgcggttcgaagac
atcgccatcctgctgccgcggcgcacggtgctgggggcgctcgagcgggcgctggcggac
cggggcatcccgtaccgcgtcgagagccagtcgctgctgtacgcggccgaggagatacgg
gacctgctgaacgtgctgacggcgatcgacgacccgacggacgaaatcgcgctggtggcg
gcgctgcggtcgccgctgttcgcctgcacggaccgggagctggcggaacacgcggcggcc
ggcgggcggtggtcgtatgagaggccagcgccggacgggagcccggagcgggtgcggcgg
gcgatggcgcagctcgcggcgtggcaccgggagcggtggacggtgtcgcccgcggggctc
atcgagcggctcatcgcggaatcgcacctgctgctgaaggcgctcggcgacacgcggccg
cgcgagacctggcggcgctaccggatcatcgccgagcaggcgcgggcgctgacggtgcgg
ggcgccgtcgcgacgctgcggcagttcacggcgtggctcgagcagcagcaggacgaaggc
gtgcgcgtcaacgaagcaatcgcgccggagccggacgacgacgccgtgcgggtgatgacg
atccacgcggcgaaggggctcgagttcccggtggtgttcgtcgccgggctcgggacgggg
acgaaccgcagcccgtcgattcgaacctggtggccgccgcacggcgacggcggcctgccg
gaggtgcgctgcgggtcaggtgaccagcggttcgagacagccgggttcgccgcggtcgaa
gacgaggagaaggcgcacgaggaggcggaggcggcgcggctgttctacgtcgccgcgacg
cgggcgcagcaggcgctggcggtctcgctctaccggacgaagcggtcggatggcggttcg
ctggcggggcgcgtggaggcggcgctggaggccgcgcccgcgggaacgttcgaacgattc
acgccgaagccggccgaagtccccggggtacgtgccaggccgggggagccgccgcccgtg
ccggcggccgacgcgtggcgcgaacggcgggaatcggcggcgaagtgcgccgcggcgccg
gtagcggcggcgacggccatcgcccacgcggcagcgccgggcgcgccggaggagccggaa
gagccgccggcgacgccggcggagccctggcggaaggggcgcgccggcactgcgatcggc
cgggcggtgcatgccgtgctgcagggcatcgacctcggcaccggcgaggggctcgaagcg
gcagcagcagcgcaggccgaagccgagggcatcgccgaccgggcggacgaggtaaagcgg
ctggcgggcaatgcgctggcatcggcagcggtgcaggcggctgtcgcgagcggccggtac
tggcgcgaggtgtacgtcggggcggacgttggaggggtgctcgtggaggggttcatcgac
ctgctctacgaggggcaggatggcctggtcatcgtcgattacaagacggacgggctgcgg
agcgcggccgaggcggaccgggtgatgccgcagtaccgcctgcaggcgggcgcctacgcg
gcggcgctcgagcaggccgccgggctggcggccgccgcggcggtgttcgtcttcaccgag
ccgagcatcgagcggcgggtcgacgacctggcggcagcgaaggcggaggcgctggagcgg
gcgcgtgagctggccgggctggcggcgtcagccggcggctga
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