Trachypithecus francoisi (Francois's langur): 117094430
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Entry
117094430 CDS
T07225
Symbol
COL4A3
Name
(RefSeq) collagen alpha-3(IV) chain isoform X1
KO
K06237
collagen type IV alpha
Organism
tfn
Trachypithecus francoisi (Francois's langur)
Pathway
tfn04151
PI3K-Akt signaling pathway
tfn04510
Focal adhesion
tfn04512
ECM-receptor interaction
tfn04820
Cytoskeleton in muscle cells
tfn04926
Relaxin signaling pathway
tfn04933
AGE-RAGE signaling pathway in diabetic complications
tfn04974
Protein digestion and absorption
tfn05146
Amoebiasis
tfn05165
Human papillomavirus infection
tfn05200
Pathways in cancer
tfn05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
tfn00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
117094430 (COL4A3)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
117094430 (COL4A3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
117094430 (COL4A3)
09142 Cell motility
04820 Cytoskeleton in muscle cells
117094430 (COL4A3)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
117094430 (COL4A3)
09154 Digestive system
04974 Protein digestion and absorption
117094430 (COL4A3)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
117094430 (COL4A3)
09162 Cancer: specific types
05222 Small cell lung cancer
117094430 (COL4A3)
09172 Infectious disease: viral
05165 Human papillomavirus infection
117094430 (COL4A3)
09174 Infectious disease: parasitic
05146 Amoebiasis
117094430 (COL4A3)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
117094430 (COL4A3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tfn04147
]
117094430 (COL4A3)
00536 Glycosaminoglycan binding proteins [BR:
tfn00536
]
117094430 (COL4A3)
Exosome [BR:
tfn04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
117094430 (COL4A3)
Glycosaminoglycan binding proteins [BR:
tfn00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
117094430 (COL4A3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
117094430
NCBI-ProteinID:
XP_033085879
LinkDB
All DBs
Position
Unknown
AA seq
1670 aa
AA seq
DB search
MSPRTAPRSQVLLLQLLLVLLAAQPTASKGCVCKDKGQCFCDGAKGEKGERGFPGPPGSP
GQKGFTGPEGLLGPQGPKGSPGLPGLTGPKGVRGVTGLPGFSGSPGLPGTPGNTGPYGLV
GVPGCNGSKGEQGFPGLPGTMGYRGIPGAPGLKGQKGAPAKGEDTELDAKGDPGLPGAPG
PQGLPGPPGFPGPVGPPGPPGFFGFPGAMGPRGPKGHMGERVIGQKGERGVKGLTGPPGP
PGTVIVTLTGPDNRTDLKGEKGDKGAIGEPGPPGPSGLPGESYGSEKGAPGDPGPQGKPG
KDGVPGFPGSEGVKGNRGFPGLAGEDGIKGQKGDTGPPGFRGPTEYYDTYQEKGEEGIPG
PPGPKGVRGPQGPSGPPGVPGSPGSSRPGLRGAPGWPGLKGSKGERGHPGKDAMGTPGSP
GCPGSPGPPGSPGPPGPPGDIIFRKGPPGDRGLPGYLGSSGIPGIDGPKGEPGLLCTQCP
YIPGPPGLPGLPGLHGVKGIPGRQGATGLKGSPGSPGNTGLPGIPGFPGAKGDRGLKGEK
GETLQPEGQVGAPGDPGLRGQPGRKGFEGIPGTPGVKGLPGPKGELALSGEKGDQGPPGD
PGSPGSAGPAGPAGPPGYGPQGEPGPQGMQGVPGAPGPPGEAGPRGELSVSTPVPGPPGP
PGPPGHPGPQGPPGMPGSMGKCGDPGLPGPDGEPGIPGIGFPGRPGPKGDQGFPGTKGSL
GCPGKIGEPGLPGKPGVPGAKGEPAVAMPGGPGTPGFPGERGNSGEHGEIGLPGLPGLPG
TPGNEGLDGPRGDPGQPGPPGEQGPPGRCIEGPRGAQGLPGLNGLKGQQGRRGKMGPKGD
PGIPGLDRSGFPGETGSPGMSGHQGEMGPPGQKGYPGNPGILGPPGEDGVVGMMGFPGAT
GPPGPPGNPGMPGQRGSLGIPGVKGQRGTPGAKGEQGDKGNPGPSQISHVIGDKGEPGLK
GFAGNPGEKGNRGVPGMPGLKGLKGLPGPAGPPGPRGDLGSIGNPGEPGLRGIPGSMGNM
GMPGSKGKRGTLGFPGRAGRPGLPGIHGLQGDKGEPGYSEGTRPGPPGPTGDPGLPGEMG
KKGEMGQPGPPGHSGPAGPEGAHGSPGSPGLPGKPGPHGDLGFKGIKGFPGPPGIKGPPG
LPGFPGSPGPMGVRGDQGRDGIPGPAGEKGETGLSRAPPGPRGNPGAQGAKGDRGSPGFP
GLPGRKGAMGDAGPRGPTGIEGFPGPPGLPGAIIPGQKGNHGPPGLRGSPGEPGPPGPPG
SHVIGIKGDKGSMGHPGPKGPPGTVGDMGPPGHLGAPGTPGLPGLRGDPGFQGFPGVKGE
KGNPGFLGSIGPPGPIGPIGPPGIRGDPGTLKIISLPGSPGPPGTPGEPGMQGEPGPPGP
PGNLGPCGPRGKPGKDGKPGSPGPAGEKGNKGSKGEPGPPGSDGLPGLKGKRGDSGSPAT
WTTRGFVFTRHSQTTAIPSCPEGTAPLYSGFSFLFVQGNERAHGQDLGTLGSCLQRFTTM
PFLFCNVNDVCNFASRNDYSYWLSTPALMPMNMAPITGRALEPYISRCTVCEGPAIAIAV
HSQTTDIPPCPHGWISLWKGFSFIMFTSAGSEGSGQALASPGSCLEEFRASPFLECHGRG
TCNYYSNSYSFWLASLNPERMFRKPIPSTVKAGELEKIISRCQVCMKKGH
NT seq
5013 nt
NT seq
+upstream
nt +downstream
nt
atgagtccccggacggcgcccagatcgcaggtgctcctgctgcagctcctgctggtgctc
ctggccgcgcagcccacggccagcaagggctgtgtctgtaaagacaaaggccagtgcttc
tgtgacggggccaaaggggagaagggggagagaggctttcctggaccccctggttctcct
ggccagaaaggattcacaggtcctgaaggcttgcttggaccacagggacccaagggctct
ccaggacttccaggactcacgggtcccaaaggtgtaaggggagtaactggattgccagga
ttttctggttctcctggacttccaggcaccccaggcaatactgggccttatggacttgtc
ggtgtaccaggatgcaatggttctaagggtgagcaggggtttccaggactcccagggaca
atgggctaccgagggatcccgggtgctcctggtttgaaaggacaaaagggtgctcctgct
aaaggagaagatacagaacttgatgcaaaaggcgaccccgggctgccaggggctccagga
ccccagggtttgccaggccctccaggttttcctgggcctgttggcccacctggtcctccg
ggattctttggctttccaggagccatgggacctagaggacctaagggtcacatgggtgaa
agagtgataggacaaaaaggagagcggggtgtgaaagggttaacaggacccccgggacca
ccaggaacagttattgtgaccctaactggcccagataacagaacggacctcaagggggaa
aagggagacaagggagccatcggcgagcctggacctcctggaccctcaggactgcctgga
gaatcatatggatctgaaaagggtgctcctggagaccccggcccgcagggaaaacccggt
aaagacggcgttcctggcttccctggaagtgagggagtcaagggcaacaggggtttccct
gggttagcaggtgaagatggcattaagggacagaaaggggacactggccctccaggattt
cgtggtccaacagaatattatgacacataccaggaaaagggagaggaaggcattccaggc
ccaccagggcccaaaggagttcgtggcccacaaggtcccagtggtccccccggagttcct
ggaagtcctggatcctcaaggcctggcctcagaggagcccctggatggccaggcttgaaa
ggaagtaaaggggaacgaggccacccaggaaaggatgccatggggactcctgggtcccca
ggttgtcctggttcaccaggccctccaggatcaccgggacctccaggaccaccaggtgac
atcatttttcgcaagggtccacctggagatcgcggactgccaggctatctagggtcttca
ggaatcccaggcattgatgggcccaaaggagaaccaggcctgctgtgtacacagtgccct
tatatcccagggccccccggtctcccaggattgccagggttacatggtgtaaaaggaatc
ccaggaagacaaggtgcaactggcttgaaaggaagcccagggtccccaggaaatacaggt
cttccaggaattccaggtttcccaggtgccaagggtgaccgaggacttaaaggagaaaaa
ggtgaaacacttcagcctgagggacaagttggtgccccaggggacccggggctcagaggt
caacctgggagaaagggcttcgagggaattcctggaactccgggagtgaaaggattacca
ggacctaaaggcgaactggctctgagtggtgagaagggggaccaaggtcctccaggggat
cctggctcccctgggtccgcaggacctgcaggaccagctggaccacctggctacggaccc
caaggagaacctggtccccagggcatgcaaggagttcctggagcccctggaccacccgga
gaagccggtcctaggggagaactcagtgtttcaacaccagttccaggcccaccaggacct
ccagggccccctggccatcctggcccccaaggtccacctggtatgcctggatctatgggg
aaatgtggagatcctggtcttccaggacctgacggtgaaccaggaattccgggaattgga
tttcctgggcgtcctggacctaagggagaccaaggttttccgggtacaaagggatcactg
ggttgtcctggaaaaataggagagcctgggttacctggaaagccaggcgtcccaggagcc
aagggagaaccagcagtagccatgcctggaggaccaggaacaccaggttttccaggagaa
agaggcaattctggggaacatggagaaattggactccctggacttccgggtctccctgga
actccaggaaatgaagggcttgatggaccacgaggagatccagggcagcctggaccacct
ggagaacaaggacccccaggaaggtgcatagagggtcctaggggagcccaaggacttcca
ggcttaaatggattgaaagggcaacaaggcagaagaggtaaaatggggccaaagggagac
ccaggaattccaggcttggatagatcaggatttcctggagaaactggatcaccaggaatg
tcaggtcatcaaggcgagatgggaccaccaggtcaaaaaggatatccaggaaatccagga
attttagggccaccaggtgaagatggagtggttgggatgatgggttttcctggagccact
ggccctccggggccccctgggaacccaggcatgccagggcagagggggagccttggaatt
ccaggagtaaagggccagagaggaaccccaggagccaagggggaacaaggagataaagga
aaccccgggccttctcagatatcccacgtaataggggacaaaggagaaccaggtctcaaa
ggattcgcaggaaatccaggtgagaaaggaaacagaggtgttccagggatgccaggttta
aaaggcctcaaaggactacctggaccagcaggaccaccaggccccagaggagatttgggc
agcattgggaatcctggagaaccaggactacgtggtataccaggaagcatggggaacatg
ggcatgccaggttctaaaggaaaaaggggaactttgggattcccaggtcgagcaggaaga
ccaggcctcccaggtattcacggtctccagggagataaaggagagccaggttattcagaa
ggtacaaggccaggacctccgggaccaacgggggatccaggactgccgggtgaaatggga
aagaaaggagaaatggggcaacctggcccacctggacattcagggcctgctggacctgag
ggagcccatggaagtcctggaagtcctggcctcccaggaaagccaggtcctcatggtgat
ttgggttttaaaggaatcaaaggcttcccgggccctccaggaatcaaaggccctccaggt
cttccaggattcccagggtctcctggaccaatgggtgtaagaggtgaccaaggacgtgat
ggaattcctggtccagccggagaaaagggagaaacgggtttatcgagggcccctccaggc
ccaagagggaacccgggtgctcaaggagctaaaggagacaggggatccccaggttttcct
ggcctccctggcagaaaaggggccatgggagatgctgggcctcgagggcccacaggcata
gaaggattcccagggccaccaggtctgcccggtgcaattatccctggccagaaaggaaat
catggtccaccaggcttaagaggaagcccaggtgagcctggtccccctggacctccaggg
agtcacgtaataggcataaaaggagacaaagggtctatgggccaccctggcccaaaaggt
ccacctggaactgtaggagacatgggaccaccaggtcatctgggagcaccaggtactcca
ggtcttccaggactcagaggtgatcctggattccaggggtttccgggcgtgaaaggagaa
aagggtaatcctggatttctaggatccattggacctccaggaccaattgggccaatagga
ccacctggtatacgtggagaccctggcacacttaagattatctcccttccaggaagccca
gggccacctggcacacctggagaaccagggatgcagggcgaacctgggccaccagggcca
cctggaaacctaggaccctgtgggccaagaggtaagccaggcaaggatggaaaaccagga
agtcctggaccagctggagaaaaaggcaacaaaggttctaaaggagagccaggaccacct
ggatcagatggattgccaggtttgaaaggaaaacgtggagacagtggatcacctgcaacc
tggacaacgagaggctttgtcttcacccgacacagtcaaaccacagcaatcccttcatgt
ccagaggggacagcgccactctacagtgggttttcttttctttttgtacaagggaatgaa
cgagcccatggacaagacctcggaactctgggcagctgcctgcagcgatttaccacaatg
ccattcttattctgcaatgtcaatgatgtatgtaatttcgcatctcgaaatgattattca
tactggctgtccacaccagctctgatgccaatgaacatggctcccattactggcagggcc
cttgagccttacataagcagatgcactgtttgtgaaggtcctgcgatcgccatagccgtt
cacagccaaaccactgacattcctccatgtcctcatggctggatttctctctggaaagga
ttttcattcatcatgttcacaagtgcaggttctgagggcagcgggcaagcactggcctcc
cctggctcctgcctggaagaattccgagccagcccatttctagaatgtcatggaagagga
acgtgcaactactattcaaattcctacagtttctggctggcttcattaaacccagaaaga
atgttcagaaagcctattccatcaactgtgaaagctggagaattagaaaaaataataagt
cgctgtcaggtgtgcatgaagaaaggacactaa
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integrated database retrieval system
