Takifugu flavidus (sansaifugu): 130517055
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Entry
130517055 CDS
T09160
Symbol
clip1b
Name
(RefSeq) CAP-Gly domain-containing linker protein 1 isoform X1
KO
K10421
CAP-Gly domain-containing linker protein 1
Organism
tfs
Takifugu flavidus (sansaifugu)
Pathway
tfs04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
130517055 (clip1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tfs03036
]
130517055 (clip1b)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tfs04812
]
130517055 (clip1b)
Chromosome and associated proteins [BR:
tfs03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
130517055 (clip1b)
Cytoskeleton proteins [BR:
tfs04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
130517055 (clip1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAP_GLY
CLIP1_ZNF
Prefoldin_2
Motif
Other DBs
NCBI-GeneID:
130517055
NCBI-ProteinID:
XP_056874622
LinkDB
All DBs
Position
20:complement(2905958..2920356)
Genome browser
AA seq
911 aa
AA seq
DB search
MEKQGVTSGPGKASGLKPPSKIARPSGAPSKTSPSSGAPKPVPPDKPPGSVASPTQEGSA
EFQIGDKVWVNGDKPGYVQFIGSTQFAPGQWAGIVLDEPIGKNDGSVAGVRYFQCEDGRG
IFTRPSKLSKTAMPEKDMNGTQASPKPAAGATSEPAPSGTTSTGQVSGIKTIAALNQMST
ESASNLSDPESQKKTKRELRLGERVLVGGTKAGVIRFLGETDFAKGEWCGVELDEPLGKN
DGAVAGTRYFQCMPRYGLFAPVHKVTRIGFPCTTPTKTKSSQRRSLLKRSPSASSMSSLS
SANSSFSGKPSRAGLLAETSARYARKISGTTALQEALKEKQQHIEQLLAERDLERGEVAK
ATSHAGAVQQELVLLRKGRDQDAVEMEAKLDQLRSLVEAADRDKVELLNQLEEEKRKVED
LQFRVEEACITKGDLETQTRLEHAHIKELEQSLLFEKTKAEKLQRDLEDTRVATVSERSR
IMELEREVADLQLRLRASQQKEDAASLSQQQISSLKVQAQSQEKKISELSVDVESKQKEV
QSLQHDKSCLEQQLIGLRQKLENAEEECRRMAKTSRELERSVELSKKDCQLLKEENLCRQ
QELKQATEKSEKMALSVEQLTSDKKMLETQLETLNEQNSKFQEELILSREGSSPEKQRIG
VLCMEIEELKLASHKSQRSADLQQRGMKTRDAVSNQEMESQLDFQKSTGAFISDKDRELE
ILRNEIEVLRGENAVAKTLQSAVETLERDKAQLQGRVHSLEQRLVGTKASEDASGAPSSG
GAVLEQLREEKEFAEGQINFLNSVIVDLQRKNEELKVKLKKLALAEFNGNDDDDGFVGVS
KQEKKATPRLFCDICDCFDLHDTEDCPTQAQSPDSVPHTAYHGSPADQRPYCDICEAFGH
ATESCNDDQTF
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagcaaggagtcacaagtgggccagggaaggccagcgggctcaaacctcccagt
aaaatcgctcgtccatcaggggctccatcgaaaacgtctccatcttcaggcgctccaaag
cccgttcctcctgataaaccccctggcagcgtggcctctccaacccaagagggaagtgcg
gaatttcaaatcggagacaaggtgtgggtcaacggcgacaagcccggctatgtgcagttc
atcggcagcacgcagtttgctcctggccagtgggccgggattgtcctcgatgagcccata
gggaaaaatgacggctccgtagcgggcgtccgatacttccagtgcgaggacgggaggggg
attttcacacggccctcaaagctgtcaaagactgcgatgccggagaaggacatgaatgga
acacaggccagtccgaagcctgctgctggtgcaacgagtgaacccgctccgagcgggact
acatcaactggtcaggtcagcggcataaagacgattgctgcgctcaaccaaatgtccacc
gagtcagcgtcaaacctgtcagaccccgaatcccagaaaaagacgaagagggagctgagg
ctgggagagcgtgtgctggttggtggaacaaaggcgggagtgattcgctttctgggagag
acagactttgccaaaggagagtggtgtggtgtggaactagacgaaccgctcggcaagaac
gatggtgcggtagcagggaccaggtacttccagtgcatgcccaggtacggcctgttcgct
ccggtccacaaggtgacgcgtatcggcttcccctgcaccacccccaccaagaccaagagt
tcccagcggaggtctctcctcaagaggagcccgagtgcatcctccatgagctcgctcagc
tctgccaactcctcgttcagtggcaaaccgagccgagctggactgctggcggagacgtcg
gctcgctacgcccgtaagatctctggcaccacggcgctgcaggaggccctgaaggagaag
cagcagcacatcgagcagctgctggcagagagggatctggagagaggcgaggtggcaaag
gcaacgagccacgcgggggcggtgcagcaggagctggttctgctgaggaagggacgggat
caggatgcagtagagatggaggccaagttagaccagttgcgctcactggtggaggctgca
gatcgagacaaggtggagctgctcaaccagctggaggaggagaagaggaaagtggaagat
ctgcagttccgtgtggaagaggcgtgcatcaccaaaggggacctggagacgcagaccagg
ctggagcatgcccacataaaggagctcgagcagagcctgctctttgaaaagaccaaagct
gaaaaactccagagggatttagaggacactagggtggccacggtgtcggagcgctccagg
atcatggagctggagcgggaggtggccgacctgcagctcaggctgcgggcgtcccagcag
aaggaggacgctgcgtctctgtcccagcagcagatcagcagcctcaaggtccaggcccag
tcccaggagaaaaagatcagtgagctgagcgtggatgtggagagcaaacagaaagaagtc
cagtctttgcagcacgataaaagctgcctggaacagcagctaattggcctgagacaaaag
ctggaaaatgctgaggaggagtgcaggaggatggcaaagaccagccgtgagttggagcgg
agtgtggagctgtccaagaaagactgtcagctcctgaaggaggagaatctgtgcagacag
caggagctgaaacaggcgactgaaaagtcagagaagatggcgctgtcagtggagcagctg
accagtgacaagaagatgctggaaacacagctggagacgctgaatgagcaaaactccaaa
ttccaggaagagctcatcctgtcgagggaaggcagcagcccagagaagcagcgtatcggg
gtcctctgcatggaaattgaggagctgaagctggcctcccacaagtctcagcgcagcgcc
gacctccagcagagaggcatgaaaaccagagacgccgtctctaatcaggaaatggagagc
cagctcgatttccagaagtccactggagctttcatctctgataaagaccgggaactggag
attctgaggaatgagatcgaggtgctgcgaggagaaaacgccgtggcgaagactctgcag
tcggcggtcgagaccctggagagggacaaggctcagctgcagggccgcgtccacagcctg
gagcagaggctcgtgggaaccaaggcctcggaggacgccagcggcgccccgtcctcaggg
ggcgccgttctggagcagctgagggaagagaaggagttcgccgagggccaaatcaacttc
ctcaacagcgtcatcgtggacctgcagcggaaaaacgaggagctgaaggtcaagctgaag
aagctggctctggccgagttcaacggcaacgacgacgacgacggcttcgtcggcgtctcc
aagcaggagaagaaggcgacgccgcgtctcttctgcgacatctgcgactgcttcgacctc
cacgacaccgaagactgcccgacccaggcccagagccccgactccgtgccccacaccgcc
taccacggcagcccggcggaccagaggccctactgcgacatctgcgaggccttcggccac
gccaccgagtcctgcaacgatgaccagactttctag
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