Takifugu flavidus (sansaifugu): 130523023
Help
Entry
130523023 CDS
T09160
Symbol
setdb2
Name
(RefSeq) histone-lysine N-methyltransferase SETDB2 isoform X1
KO
K18494
[histone H3]-lysine9 N-trimethyltransferase SETDB2 [EC:
2.1.1.355
]
Organism
tfs
Takifugu flavidus (sansaifugu)
Pathway
tfs00310
Lysine degradation
tfs01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
130523023 (setdb2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tfs03036
]
130523023 (setdb2)
Enzymes [BR:
tfs01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.355 [histone H3]-lysine9 N-trimethyltransferase
130523023 (setdb2)
Chromosome and associated proteins [BR:
tfs03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
130523023 (setdb2)
Heterochromatin formation proteins
Other heterochromatin formation proteins
130523023 (setdb2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SET
Pre-SET
MBD
Motif
Other DBs
NCBI-GeneID:
130523023
NCBI-ProteinID:
XP_056883936
LinkDB
All DBs
Position
3:complement(10779445..10782989)
Genome browser
AA seq
607 aa
AA seq
DB search
MEMEEDSLDPEDVERAKAFWKKEDIDDVFHVVFGYLGNLKRVLKKNTATDREYVQGLKLL
EALNCSASGLNRDSSVVQVVIGSGELMVPEDSLSSPCSSPAAFSPNRDFSAAASPGDLLP
PLTPVQLHYRPHTCSKACLTTVPIMPQSVPLFWGQNPLKIPLLCGFKRLTARLPLTEGAE
LEDSEDSLDGDVIYKTPCGLSLRNYDDVMSFLLDTESYDILQVDFFTYNPFIQLDPPPSD
RLQLPELDLSRGIEPTPVELCLGEGGAKPPNFRYRKDRWPHGCFLSRSLKLFSTCCDCVD
GCSDAKQCACVAMTKEGRHYSHQRLEEPISSGVYECGPWCGCDRARCQNRLVQRGIRVRL
QVFQTDNCGWGVRCRDDLDRGTFVCTYAGVILQRAQSSITPPSPKLPRIELPSDDEVQVV
TEWLVPSQEDGKSAVMEGSSPPLHVPVIQRPADAKTPQDRDKKGPPGGQQPAATLAAMSD
EPTSDVCRSNGSEMEKKNMKSLKRVLTDVDTIIVDASKEGNVGRFFNHSCKPNLFLQNVF
TDSHDLAFPVIAFFTSRVVKAGTELTWDYSTHVKRKQEVPCLCGSRDCTGHFAIEEKLCE
MCEAEAQ
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atggagatggaagaagactctttagatccagaagatgttgagcgagccaaagcattttgg
aagaaggaggatattgatgacgtgtttcatgtagtatttgggtatctgggtaatctgaaa
agggttctgaagaaaaacacagccacagatcgagaatatgttcagggcttaaagctgctg
gaggctttgaactgttcagcgtccggtttaaatcgggactcttctgtggttcaggtggtc
atcggttcaggtgaacttatggtgcctgaggactctttatccagcccctgttcctcccct
gctgccttctccccaaatagagactttagtgctgcagcttcccctggtgaccttctgcct
cctctaacacctgttcagttgcattacaggccccacacttgcagcaaggcttgcttgacc
acagtacccatcatgcctcagtctgtgccactgttttggggtcagaacccactaaagatt
ccgttgctctgcggctttaagaggctgaccgccagactgccactcactgagggggcagag
ttggaggactcggaggattcgttggatggggacgtcatttacaaaacaccctgtggcctg
agtctccgtaactatgacgatgtgatgtctttcctgttggacacagagagttatgacatc
ctgcaggttgacttcttcacctataacccattcattcagttggacccacccccgtcagac
aggctccagttgccagagcttgacttgagccgcggcatcgagccgacacctgtggagctg
tgtctgggtgaaggtggtgcaaaaccacccaactttcgctacaggaaagaccgatggccg
cacggctgcttcctaagccgcagtctgaaattattcagcacctgttgcgactgtgttgat
ggctgcagcgacgcaaagcagtgcgcctgtgttgccatgacgaaggaggggcgccattac
agccaccaaaggctggaagaacccatctcatcgggtgtgtatgagtgtggaccgtggtgc
ggctgtgaccgagctcgctgtcagaaccgtctggtccagagagggatcagggtacgtctt
caggtcttccagactgacaactgtggctggggcgtgcgctgccgtgatgacctggaccgc
gggacgtttgtgtgcacatatgcaggtgtgatcctgcaaagggcccaaagttccatcacg
cccccgtccccgaagctgccgaggatagaactcccctctgatgatgaagtacaggtagtt
acagagtggctggtcccctcgcaggaggatggcaaaagtgctgtgatggaaggctcgtcg
cctcctctgcacgtcccagtgatccagagacctgctgacgccaaaacaccgcaggacaga
gacaagaaggggccacctgggggccagcagcctgcagctactttagcagctatgtcggat
gagcccacgtcagatgtctgcagatccaacggtagcgaaatggagaaaaaaaacatgaag
tctttaaagagagtcttgacagatgtggacaccatcattgtggatgccagcaaagaaggg
aacgtcggccgcttttttaaccacagctgcaagccgaacctcttcctccagaacgtcttc
acagactcccatgacctggccttccccgtcatcgccttcttcaccagcagagttgtgaag
gctggcaccgagcttacctgggattactccacccatgtcaagcggaaacaggaggtgcct
tgcctttgcgggtctagagattgtactggacactttgccattgaggaaaagctgtgtgag
atgtgtgaagccgaggcacagtaa
DBGET
integrated database retrieval system
