KEGG   Takifugu flavidus (sansaifugu): 130529400
Entry
130529400         CDS       T09160                                 
Symbol
col9a3
Name
(RefSeq) collagen alpha-3(IX) chain
  KO
K08131  collagen type IX alpha
Organism
tfs  Takifugu flavidus (sansaifugu)
Pathway
tfs04510  Focal adhesion
tfs04512  ECM-receptor interaction
tfs04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:tfs00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    130529400 (col9a3)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    130529400 (col9a3)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    130529400 (col9a3)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:tfs00535]
    130529400 (col9a3)
Proteoglycans [BR:tfs00535]
 Extracellular matrix (ECM) proteoglycans
  Others
   130529400 (col9a3)
SSDB
Motif
Pfam: Collagen
Other DBs
NCBI-GeneID: 130529400
NCBI-ProteinID: XP_056895515
LinkDB
Position
8:12320355..12330344
AA seq 678 aa
MLVFSALWVLLLCQLLTSSSAQRPGPRGPTGPPGPPGAPGRDGTDGKPGPAGLMGKPGPK
GKDGLPGLPGKPGLPGLPGVDGLTGPDGPSGKDGPSGEGGDAGPPGPAGPPGRGRAGAAG
LPGTNGLPGGVGPQGSPGPEGLPGLPGPPGPDGPPGLPGTLHDLTGDLLCPAICPPGPPG
APGMPGFKGHTGHKGDKGELGKDGEKGDPGPPGPAGVPGTVGLQGPRGLRGLQGPMGSVG
DRGLPGFRGKPGIAGIIGKTGDAGEKGPQGFKGPKGEIGKIGPKGGPGGAGPKGEPGIPG
RDGKDGTPGLDGEKGDAGRHGTVGEKGPNGLPGLQGKAGAKGSKGGVGDPGKPGEAGPSG
EPGIPGEIGVPGDRGIAGPRGVAGGIGPVGNPGPQGIKGFQGVKGGLGDPGLPGPTGIRG
EFGDRGPTGASGPKGDMGVAGSDGLPGENGEPGPFGPVGQKGESGKRGELGPKGGSGPQG
ELGPRGPPGKQGAMGFQGEQGAPGIAGKTGVPGKLVSEQQIRELCGPMINDQIAQLAANL
RRPLAPGMVGRPGRPGAPGKSGVAGSIGHPGARGPPGYRGLPGELGDPGPRGDVGEAGDK
GSIGRAIDGPPGDQGYQGLPGVPGIVKDGRDGSPGDPGEPGEPGRLGRTGHQGPPGICDT
SACQGAAAAGKSSNPKNH
NT seq 2037 nt   +upstreamnt  +downstreamnt
atgctggtgttctctgcactgtgggtgctcttgctgtgccaacttttgacatcctcctct
gcccagaggccgggccccagaggacccactgggccaccaggacccccaggggcaccgggg
agagacggcactgatggaaaaccaggaccggccggattgatggggaaaccaggtcccaaa
gggaaagacgggttaccgggattaccgggaaaaccgggcctgccgggacttccgggggtg
gacggtttgacgggtcctgatggtccttctgggaaggatggaccctcaggggaaggaggt
gacgctggacctcccgggcccgccggacctcctggccgagggagagccggagcggcaggc
ctgccgggaaccaacgggctgccaggcggcgttggacctcagggttcgccgggccctgag
ggccttccaggacttccaggacctccaggacccgatggaccgcctggtcttcctggaact
cttcatgaccttacaggcgaccttctgtgtcccgccatctgccctcctggtccccccgga
gctcccgggatgccgggctttaagggtcacacgggccacaagggagacaagggagagctg
ggaaaggatggagagaagggtgacccgggtccaccaggtccagcgggtgttcctgggacg
gtcggtctccagggcccgcgtggtctcagaggtctacaaggcccgatgggatccgtagga
gacagaggtcttccaggtttccggggaaaaccgggcatcgccggcatcatcgggaagaca
ggcgacgctggagaaaaaggtccgcagggattcaagggcccaaagggagaaatcggaaag
attggtccaaaaggaggtccggggggtgcggggcccaaaggagagcctggtattcctggc
agggacggcaaagacggaacgcctggattagatggcgagaagggtgatgcagggcgccac
ggcacggtcggagagaagggcccgaacgggcttccgggtctgcaaggaaaagctggtgcg
aagggttcgaagggaggagttggtgatcctggcaaacctggggaggcgggaccctctgga
gagccaggtattcctggcgagatcggcgttccgggtgatagggggatcgcaggacctcga
ggtgtggcgggaggcatcggaccggtgggcaacccgggacctcagggcatcaaaggcttc
cagggggttaaaggaggcttgggggatccaggtcttccaggtccaacgggaatccgtgga
gagttcggtgacaggggtccaacaggagcttctggacctaaaggagacatgggggtagca
ggaagtgacggtctgcctggagaaaacggagaacctggtccttttggaccagtgggacaa
aaaggagagtctgggaagcgaggtgaactgggaccaaagggaggctcgggtccacaagga
gagctggggccaagaggaccccctggaaagcaaggagcgatgggtttccaaggggaacag
ggtgcgcccggaatagcaggaaagacgggcgtcccaggtaaactggtgagcgagcagcaa
atcagggaactctgtggtccgatgatcaatgatcagatcgcccagctggccgctaacctt
cggagacccctggctcctggaatggtgggccgccccggccgtcctggggccccaggaaag
tccggagtggctggttctattggacatccaggtgcccgtggaccaccaggctacagaggc
ctgccaggagaacttggagatccaggtcccagaggtgatgtcggtgaagcaggtgataaa
ggatcaataggaagagccatcgacgggccccctggagaccaaggataccaaggtctccca
ggagtacctggaattgtcaaagacggccgcgatggatctccaggagatccaggtgagcct
ggagagccgggccgattgggtagaaccgggcaccaggggcctcctggcatctgcgacacg
tcagcctgtcagggagcagcagcagccggaaaatcctccaaccccaaaaaccattaa

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