Thermobifida fusca: Tfu_0574
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Entry
Tfu_0574 CDS
T00265
Name
(GenBank) similar to DNA-directed RNA polymerase specialized sigma subunit sigma24 -like protein
Organism
tfu
Thermobifida fusca
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
HTH_29
HTH_Crp_2
HTH_38
HTH_23
HTH_31
HTH_28
HTH_3
Motif
Other DBs
NCBI-ProteinID:
AAZ54612
UniProt:
Q47SF5
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Position
complement(654946..656379)
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AA seq
477 aa
AA seq
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MTAPQRPERQQISEDHAFALLLRQGEGYERCYDAFAPALYRYCWTLLGAEQEDAAAEAVY
ETFLAAVELLPRLSDPDLFRAWLFALARAACERHGFAAQPAYAHLTVHSEQQPFVAALSA
LLPSQRELLELSLRHGLTHTQIAAVLGLDPETVSDLCRSAAQQAADLLTEQQPGGSPGSR
WFIADIPLVVSSIALPGPPRSLRARVIADCSDATAITRREQAAALLCPLGANGFPLPGAR
GAEAEAAEPVQADAAVPAASASEADASPAAAEPETTDSAIAGEPHRLSGWLVPATAGLVT
ALVAFSLWGLGAFTNRPGNGTAAGTPPPVDGVSVAPMSDHVPASAAPDTGKVPSIELTEP
TLEPTPEEPVEPVAPDSVEDDTAEPAAPPAEPDPAPPASEDAATVDPPAPAPQQPAPAPR
EEPASQPQPAPTAPAAPAPAPAPAQPAQEDPPPRRPGSGVISLLEGVLGLLGLHGNR
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
ttgacagcgccgcagagaccggagcgtcagcagatcagcgaagaccacgcgttcgccctg
ctgctgcggcagggcgaagggtacgaacggtgctacgacgctttcgcacccgcgctctac
cgctactgctggaccctgctcggcgccgagcaggaggatgctgcggcggaagccgtctac
gaaaccttcctggctgccgtcgaactcctcccccgcctgtccgatcctgacctgttccgg
gcctggctgttcgcgctcgcccgggccgcctgcgagcggcacggattcgccgcgcagccc
gcgtatgcgcacctcaccgtccacagtgagcagcagcctttcgttgccgcgctgagcgcc
ctcctccccagccagcgggaactgctggagctctccctgcggcacgggctgacccacacc
cagatcgctgccgtcctgggcctcgaccctgaaacggtgagcgacctctgccgctccgca
gcccagcaggccgcagacctactcaccgagcagcagcccggcggcagtccaggatcccgg
tggttcatcgcggacattcccctggtcgtgagctctatcgcgctgcccggcccgccgcgt
tccctgcgcgcccgagtcatcgccgactgttcggacgccaccgcaatcacgcggcgggag
caggctgctgccctgctctgcccgctcggagccaacggcttcccgctgccgggggcgcgc
ggcgcggaagcggaggcagccgagcccgtccaggccgacgcggccgtccccgcggcctcc
gcatctgaggcggacgcctccccggctgccgccgagcccgaaaccacggacagcgctatt
gcgggggagccgcaccggctctccggctggctggttcccgccaccgccggtctcgtcacc
gcgctggtcgcattcagcctgtggggcctgggcgcgttcacgaaccggcccgggaacgga
accgcggccgggaccccgcccccggtggacggggtgagtgtcgcccccatgtccgatcac
gtccccgcgagcgccgccccggacacgggcaaggtgccttccatcgaactcaccgagccg
acactggagcccacaccggaagaacccgtcgaaccggtggcaccggacagcgtcgaggac
gacactgccgaacccgccgccccgccagcagagcccgacccagcgcctcctgccagcgaa
gacgcggcaacggtcgaccctcccgcgcctgctccgcagcagcctgccccggcaccgcgc
gaggaaccggccagtcagccccagcctgctcccacggcgcctgccgcccccgcgccggca
ccggctcccgcccagcccgcccaggaagacccgccgccgcgccgcccgggaagcggcgtg
atctcgctcctcgaaggagtcctggggctcctcggcttgcacggcaaccgctga
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