Torulaspora globosa: HG536_0C04140
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Entry
HG536_0C04140 CDS
T06981
Name
(RefSeq) uncharacterized protein
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
tgb
Torulaspora globosa
Pathway
tgb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tgb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
HG536_0C04140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tgb03041
]
HG536_0C04140
Enzymes [BR:
tgb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
HG536_0C04140
Spliceosome [BR:
tgb03041
]
Complex C
Other components
Step II factors
HG536_0C04140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
S1
Helicase_C
HA2_N
AAA_22
DEAD
ABC_tran
T2SSE
nSTAND3
AAA_30
PWI
SRP54
AAA_16
AAA_19
NB-ARC
CvfB_2nd
AAA_7
Sigma54_activ_2
TsaE
AAA
Motif
Other DBs
NCBI-GeneID:
59325381
NCBI-ProteinID:
XP_037138920
LinkDB
All DBs
Position
3:781710..785108
Genome browser
AA seq
1132 aa
AA seq
DB search
MSHELSEILGTEDAVVIDFVLSIKCQSKNARDFEQKIEALDVGLSRDAIHQVWKLLSRVG
AASEPKLEVARILRDSIAVDDQVVVDFIINTAGHCKTLEEFQKRLRDMDCGISEAVASEI
YRKVKPRSTLACDHGSMPTMKQEESRKPELADSKSKLDEFKGNLLTTSAIDLDVSPVLGK
IYRGSVKNITAFGCFVQLMGVRGAKCDGLVHISEMGTARVRTPRDVVRVGQQVFVRVLKI
QSNGKISLSMKNIDQFTGEEIFEEKFDQPPEARGRQSTRSVSHRSDIRGAERRPLTSPER
WEIKQLIGSGAASIEDYPELNHDVGKQHTEVSGSLVHKSDGSAEAIEIEMNSDDEPAFLK
AQLEKGVKKYEPPKTAKVPKGTLNRVAVNGSQLMKSHREEKARLKREIEQQIRKKRAEED
PTKNARDDRREVEGLRQQLIVTEWERSRMQEDIRYGKRETRPISAQRQSLPVYKMKSELL
QAVQDNQFLVIVGETGSGKTTQITQYLNEAGYGSRGIIGCTQPRRVAAVSVSKRVAEEFG
CKLGAEVGYTIRFEDNTSPQTRIKYMTDGMLQREALLDPVMSKYSVVMLDEAHERTVATD
VLFGLLKKAAQDRPDLKIIVTSATLDAAKFSEYFCQCPVIKIPGKTFPVEVLYSQNPQMD
YIESALDTVMEIHINEAPGDILVFLTGQDEIDSCCEILYQRVKTLGDSIGKLLILPVYSA
LPSEVQSKIFEPTPEGTRKVVFATNIAETSITIDGIYYVIDPGFAKMNTFNPRIGMEQLV
VSPISQAQANQRKGRAGRTGPGKCYRLYTESAFYNEMLPNTIPEIQRQNLANTILMLKAM
GISDILSFEFMDRPPKNLMLRALEELFNLQALDDDGVLTELGLRMSQFPMEPELSRALLS
SITNNCSEDIITIISMLSVQSVFYRPKDKYQEADNKKARFHHPLGDHLTLLNVYNRWQQA
HCTEQFCSLNYLHYRHLRRARDVRNQLVALFNRFHLPVKSGHGDPDSIRRALVAGFFMNA
AKRDSQVGYKTICGGTAVGIHPSSSLFGKEYEYVIYHSLVLTSREYMAQVTAIDPSWLLE
SAPHFYKAADEDSQSRKKAKIAPLHNKFAKDQNSWKLSSIRQSRERALGTRR
NT seq
3399 nt
NT seq
+upstream
nt +downstream
nt
atgtcccatgagttatctgagattttaggtacggaggatgctgtagttatcgattttgtt
ctgagtatcaagtgtcaatctaagaatgctcgcgatttcgagcaaaagatagaagctctg
gacgtcggtctatcgcgagacgctattcatcaggtatggaaactgctctcgagggttgga
gcggccagcgagccgaaactggaggtcgccaggatactgcgggattctatcgcggtcgat
gaccaggtggtagtagattttataatcaatactgctggccattgcaagacgttggaagag
ttccaaaagcgtctgagggatatggattgtggtataagtgaggctgttgcgtcggaaatt
tatcgtaaagtaaagccccggagcactttggcttgcgatcatggttccatgcctacaatg
aagcaagaagagtcacgcaaacctgagttggcagactcgaaatccaagctggatgagttt
aaggggaatttgcttacgacgtctgcgatagatctagatgtttcgcctgtcttaggcaaa
atttatcgaggaagcgtgaaaaatatcactgcgtttggctgctttgtgcagcttatgggc
gtccggggggcgaaatgcgatggtttggttcatatctcagagatgggtaccgctagagta
cgaacacctcgagatgtcgttcgagtgggccagcaggtcttcgtaagggttctgaaaata
cagtctaatggcaaaatctctctgagtatgaagaacattgatcaatttaccggtgaagag
atattcgaagaaaaatttgatcaaccaccagaagcccggggaaggcaatccaccaggtct
gttagccatcgatccgatatcagaggagctgaaagacgacctctcacatctcctgagaga
tgggaaatcaagcaactgataggaagtggagcggcttctatcgaggattatcccgagctc
aaccacgacgtcggaaaacaacacacagaggtctcaggatcattggtgcataaaagtgac
gggagtgcagaagctatagaaattgaaatgaattcagacgatgagccggctttcctgaaa
gctcagcttgagaaaggcgttaaaaagtatgagccgccaaaaactgcaaaggtgcccaaa
ggtacgttgaatcgagtggcagtcaatggttcacagcttatgaagtctcaccgggaggag
aaggccaggctgaaaagagagattgagcagcagataaggaagaaacgtgccgaagaagat
ccaaccaagaatgcaagggatgatagaagagaagttgaggggcttcgccagcagctgata
gttacagaatgggagaggagtaggatgcaagaggacattagatatggtaagagggaaacg
cggcccatcagcgctcagcgccagtctttgccggtttataagatgaaatctgaattactg
caagctgtgcaggataaccagtttcttgtgattgttggagaaacaggatccggtaaaaca
acacaaatcacacagtatctcaatgaggcaggttacggctctcgcggtattataggatgt
acgcaaccacggagagttgctgcagtatccgtctccaaaagggttgcggaagaatttgga
tgcaagctgggcgcagaagtgggttatacaattagattcgaggataatacatctccacaa
acccgtattaagtacatgacggatggtatgctgcaacgagaggctctgcttgacccagta
atgtcaaaatattcagtcgtgatgctggacgaggctcacgaaagaacagttgcaaccgat
gttttatttggtctattgaaaaaagcggcgcaagataggcctgacctgaagataatcgtt
acatctgcgacgctagatgctgccaagttttctgagtacttttgtcagtgtcccgtcata
aaaattccggggaaaacattcccggtcgaagttctgtattctcaaaatccgcaaatggac
tacattgaatctgctttagacactgttatggaaatccatatcaatgaagcccccggagat
atattagtattcttaaccgggcaggatgaaattgactcttgctgcgaaattttgtatcag
cgtgtcaaaactttgggggatagcatcggaaagctcttgatattacctgtttattcagct
ctcccgagcgaagtgcaatccaagatcttcgagcccactccagaagggactcgtaaagtg
gtctttgctacaaatatcgctgaaacatctatcacaatcgatggtatttactatgtgatc
gacccaggtttcgcgaaaatgaatacattcaatcctaggattggtatggagcaattggtt
gtttcaccaatctctcaggctcaagccaaccaaagaaaaggccgcgcaggtagaacgggc
cctggcaaatgttaccgactgtatactgagtctgcattttacaacgagatgcttcccaac
acaatcccagagatccagcgacaaaatcttgcaaataccattttaatgctgaaagccatg
ggtatcagcgatattcttagtttcgagttcatggatcgtccaccaaagaatctgatgcta
cgtgctttagaagagcttttcaatctgcaagcattggacgatgacggtgttttaactgag
ttagggctgcgtatgtctcagtttcccatggagcccgagctttcgagggcgctactttcg
tcgatcaccaataactgttcggaggacataattaccatcatttcaatgctatcggtgcaa
agtgtcttttaccgaccaaaggacaagtatcaggaagctgacaataaaaaagctagattt
caccatcctttaggtgaccatctaaccctattgaatgtttataaccggtggcagcaggcc
cattgcactgaacaattttgctcgctaaattatctacactaccggcatttaagacgggca
agggatgtgagaaaccagttagtcgctttattcaatcgattccatttaccagtcaaaagc
ggccatggtgatccagattcgatcagacgtgcattagtagccggatttttcatgaacgct
gccaagcgtgattcgcaagtcggctataaaaccatatgtggtggtacagcggttggtatc
catccttctagttcgctcttcggtaaagagtacgaatatgtcatctaccacagtttggtt
ttgacgagcagagagtacatggcgcaagtaacagcaattgacccaagttggctgttggaa
tcggctccgcatttttacaaagctgccgatgaagacagtcaatcacgtaagaaggctaag
attgcaccattgcacaacaaatttgcaaaagatcaaaactcatggaaactgagttccatt
cgacagtcccgcgaaagagcactgggtaccaggagatga
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