Theropithecus gelada (gelada): 112636054
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Entry
112636054 CDS
T08041
Symbol
COL4A4
Name
(RefSeq) collagen alpha-4(IV) chain
KO
K06237
collagen type IV alpha
Organism
tge
Theropithecus gelada (gelada)
Pathway
tge04151
PI3K-Akt signaling pathway
tge04510
Focal adhesion
tge04512
ECM-receptor interaction
tge04820
Cytoskeleton in muscle cells
tge04926
Relaxin signaling pathway
tge04933
AGE-RAGE signaling pathway in diabetic complications
tge04974
Protein digestion and absorption
tge05146
Amoebiasis
tge05165
Human papillomavirus infection
tge05200
Pathways in cancer
tge05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
tge00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
112636054 (COL4A4)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
112636054 (COL4A4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
112636054 (COL4A4)
09142 Cell motility
04820 Cytoskeleton in muscle cells
112636054 (COL4A4)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
112636054 (COL4A4)
09154 Digestive system
04974 Protein digestion and absorption
112636054 (COL4A4)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
112636054 (COL4A4)
09162 Cancer: specific types
05222 Small cell lung cancer
112636054 (COL4A4)
09172 Infectious disease: viral
05165 Human papillomavirus infection
112636054 (COL4A4)
09174 Infectious disease: parasitic
05146 Amoebiasis
112636054 (COL4A4)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
112636054 (COL4A4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tge04147
]
112636054 (COL4A4)
00536 Glycosaminoglycan binding proteins [BR:
tge00536
]
112636054 (COL4A4)
Exosome [BR:
tge04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
112636054 (COL4A4)
Glycosaminoglycan binding proteins [BR:
tge00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
112636054 (COL4A4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
112636054
NCBI-ProteinID:
XP_025260183
Ensembl:
ENSTGEG00000015271
LinkDB
All DBs
Position
12:complement(103698262..103860410)
Genome browser
AA seq
1692 aa
AA seq
DB search
MSSLHVVLMRCSFRLTKSLATGPWSLILILFSVQYVYGSGKKYVGPCGGRDCSVCHCVPE
KGSRGSPGPPGPQGPIGPLGAPGPTGLSGEKGMRGDRGPPGTAGDKGDKGPTGVPGFPGL
DGIPGHPGPPGPRGKPGKCGYNGSRGDPGFPGGRGALGPGGPPGHPGEKGEKGNSVFILG
AIKGIQGDRGDPGLPGLPGSWGAGGPAGPAGYPGEPGLVGPPGQPGRPGLKGNPGVGVKG
QMGDPGEVGQQGSPGPTLLVEPPDFCLYKGEKGIKGIPGMIGLPGPPGRKGESGIGAKGE
KGIPGFPGPWGDPGSYGSPGFPGLKGELGLVGDPGLFGFLGPKGDPGDRGHPGPPGVLVT
PPLPLKGPPGDPGFPGRYGETGDVGPPGPPGLLGRPGEACAGMIGPPGPQGFPGLPGLPG
EAGIPGRPDSAPGKPGKPGSPGLPGAPGLQGLPGSSVTYCSVGNPGPQGIKGKVGPPGGR
GSKGEKGNEGLCACEPGPMGPPGPPGLPGRQGSKGDLGLPGWLGTKGDPGPPGAEGPPGL
PGKPGAPGPPGNKGAKGDVVISRVKGHRGERGPDGPPGFPGQPGSHGLDGHAGEKGDPGL
PGDHEDAIPGGKGFPGPLGPPGKAGPVGPPGLGFPGPPGERGYPGVPGRPGVRGPDGLKG
QKGDTVSCNVTYPGRQGPPGFDGLPGPKGFPGPQGAPGLSGSDGHKGRPGTPGTSEIPGP
PGFRGDIGDPGFGGEKGSSPVGPPGPPGSPGVNGQKGIPGDPAFGHLGPPGKRGLSGVPG
IKGPRGDPGYPGAEGPAGIPGFPGLKGPKGREGHAGFPGVPGPPGHSCERGAPGIPGQPG
LPGDPGSPGAPGGKGQPGDVGPPGPAGMKGLPGLPGRPGAHGPPGLPGIPGPFGDDGLPG
PPGPKGPRGLPGFPGFPGERGKPGAEGCPGTKGEPGEKGMSGFPGDRGVRGAKGAIGPPG
DEGEMAIISKKGKPGEPGPPGDDGFPGERGDKGTPGMQGRRGEPGKYGPPGFHRGEPGEK
GQPGPPGPPGPPGSTGLRGFIGFPGLPGDQGEPGSPGPPGFSGIDGARGPKGNKGDPAPA
SHFGPPGPKGEPGSSGCPGHFGASGEQGLPGIQGPRGSPGRPGPPGSSGPPGCPGDQGMP
GLRGQPGEMGDPGPRGLQGDPGIPGPPGIKGPSGSPGLNGLHGLKGQKGTKGASGLHDVG
PPGPVGMPGLKGERGDPGSPGISPPGPCGEKGLPGPPGRSGPPGPAGATGRAPKDIPDPG
PSGDQGPPGPDGPRGAPGPPGLPGSVDLLRGEPGDCGLPGPPGLPGPPGPPGYKGFPGCD
GKDGQKGPMGFPGPQGPHGFPGPPGEKGLPGPPGRKGPTGLPGPRGEPGPPADADDCPRI
PGLPGVPGLRGPEGAMGLPGMRGPPGPGCKGEPGLDGRRGMDGIPGSPGPPGRKGDTGED
GYPGGPGPPGPTGDPGPKGFGAGYLSGFLLVLHSQTDQEPTCPLGMPRLWTGYSLLYLEG
QEKAHNQDLGLAGSCLPVFSTLPFAYCNIHQVCHYAQRNDRSYWLASAAPLPMMPLSEEA
IRPYVSRCAVCEAPAQAVAVHSQDQSIPPCPQTWRSLWIGYSFLMHTGAGNQGGGQALMS
PGSCLEDFRAAPFLECQGRQGTCHFFANEYSFWLTTVKADLQFSSAPAPDTLKESQAQRQ
KISRCQVCVKYS
NT seq
5079 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtctctgcacgtagtactaatgaggtgctccttcagattgaccaagtcattggcc
acaggtccctggtcacttatactcattctcttttctgtacaatacgtatatgggagtgga
aagaaatacgttggtccttgtggaggaagagattgctctgtttgccactgtgttcctgaa
aaggggtctcggggttcaccaggaccaccagggccacagggtccaattgggcccctggga
gccccaggacccactgggctttcaggagagaaaggaatgagaggggaccgcggccctcct
ggaacagcaggggacaaaggagataagggcccaactggtgttcctggatttccaggttta
gatggcatacctgggcatccagggcctcctggacccagaggcaaacctggtaagtgtggc
tacaatggctcaagaggtgacccagggtttccaggaggaagaggagctcttggtccagga
ggccccccaggccatcctggggaaaagggagaaaaaggaaattcagtgttcattttaggt
gccattaaaggtattcagggagacagaggcgacccaggactgcctggcttaccaggatct
tggggtgcaggagggccggcgggccccgcaggatatcctggagagccagggttagtggga
cctccgggccaaccagggcgtccaggtttgaagggaaatcccggtgtgggagtaaagggg
caaatgggagacccgggtgaggttggtcagcaaggttctcctggacccaccctgttggta
gagccacctgacttttgtctctataaaggagaaaagggtataaaaggaattcctggaatg
attggactgccaggaccaccaggacgcaagggagaatctggtattggggcaaaaggagaa
aaaggcattcctggatttccagggccttggggggatcctggttcctatggatctccaggt
ttcccaggattaaagggagaactaggactggttggagatcctgggctatttggatttctt
ggcccaaagggggatcctggagaccgagggcacccaggaccaccaggtgttttggtgact
ccacctcttccactcaaaggcccaccaggggacccaggattccctggccgctatggagaa
acaggggatgttggaccacctggacccccaggtctcttgggcagaccaggggaagcctgt
gcaggcatgataggaccccctgggccacaaggatttcctggtcttcctgggcttccagga
gaagctggtattcctgggagacctgattctgctccaggaaaaccagggaagccaggatca
cctggcttgcctggagcaccaggcctgcagggcctcccaggatcaagtgtgacatactgt
agtgttgggaaccctggaccacaaggaataaaaggcaaagtgggtcccccaggaggaaga
ggctcaaaaggagaaaaaggaaatgaaggactctgtgcctgtgagcctggtcccatgggc
ccccctggacctccaggacttcccgggaggcaggggagtaagggagacttggggctccct
ggctggcttggaacaaaaggtgacccaggacctcctggtgctgaaggacctccagggcta
ccaggaaagcctggtgcccccggaccacccggcaacaaaggggcgaagggtgatgtggtc
atatcaagagttaaagggcacagaggagaaagaggtcctgatgggcccccaggatttcca
gggcagccaggatcacatggtctggatggacatgctggagaaaaaggggatccaggactc
ccaggggatcatgaagatgcgattccaggtggtaaaggatttcctggacctctgggtccc
ccaggcaaagcaggacctgtggggcccccgggactgggatttcctggtccaccaggagag
cgaggctacccaggagttccaggccgcccaggtgtgaggggccctgatggcttgaagggt
cagaaaggtgacacagtttcttgcaatgtgacctatcctgggaggcaaggccctccaggt
tttgacggacttccaggtccaaagggatttccaggtccccaaggtgcccctggcctgagt
ggttcagatgggcataaaggcagacctggcacaccaggaacatcggaaataccaggtcca
cctggttttcgtggtgacataggcgatccgggttttggaggtgaaaaggggtcctcccct
gttgggcccccaggccctcctgggtcaccaggagtgaatggtcagaaaggaatcccggga
gaccctgcatttggtcacctgggacccccgggaaagaggggtctttcaggagtgccaggg
ataaaaggacccagaggtgatccgggatatccaggggctgaagggccagctggcattcct
ggattcccaggtcttaaaggtcccaaaggcagagagggacatgctgggtttccaggtgtc
ccaggtccacctggccattcctgtgaaagaggtgctccaggaataccagggcaaccggga
ctccctggggatccaggtagcccaggtgctccaggtgggaaaggacagccgggagatgtg
gggcctcctgggccagctggaatgaaaggtctccctggactcccaggacggcctggggca
catggtcccccgggcctcccaggaatcccaggtccctttggggatgatgggctacctggt
cctccaggtccaaaaggaccccgggggctgcctggtttcccaggttttcccggagaaaga
ggaaagcctggtgcagagggatgtcctggcacaaagggagaacctggagagaagggcatg
tctggctttcccggagaccggggagtgagaggggccaaaggagccataggacctcctgga
gatgaaggagaaatggctatcatttccaaaaagggaaaacccggggaacctggacctcct
ggagatgatggattcccaggagaaagaggtgataaaggaacacccgggatgcaagggaga
agaggagagccgggaaaatatggaccacctggatttcacagaggggaacctggtgagaaa
ggtcagccagggcctcctggacccccaggccctccaggctcaactggtctaagagggttc
attggttttccagggcttccaggtgaccagggtgagccaggttctccaggtccccctgga
ttttcaggaatcgatggagcaagaggacctaaaggaaacaaaggtgaccctgcccctgcc
agtcactttggtccacctggtccaaagggtgagccaggtagctctggatgtccagggcat
tttggagcatccggagagcagggcttgcctggcattcaagggcccagaggatcacctgga
cggccaggaccacctggctcctctggaccaccagggtgcccaggtgatcaggggatgcct
gggctgaggggacagccaggagaaatgggagaccctgggccaagaggcctccagggggat
ccagggataccaggtcctccaggaataaaaggtccctccgggtcacctggcctgaacggc
ttacatggattgaagggtcagaaaggaaccaaaggtgcttcaggtttgcatgatgtgggg
ccacctggtccagtgggaatgcctgggctaaaaggggagagaggagatcctgggagccca
ggaatctctcctccaggtccttgtggagaaaaaggtctcccaggtcccccagggagatca
ggaccacctggtcctgcgggtgccacaggaagagcgcctaaggacattcctgacccgggt
ccatctggagatcagggacctcctggtcccgatggcccaagaggagcacctgggcctcca
ggcctccctgggagtgttgacctcctgagaggggagccaggtgactgtggtctaccaggg
ccaccaggtctccctggcccaccaggccctccaggatacaaaggctttccaggatgtgat
ggaaaagatggccagaaaggaccaatgggattcccagggccgcagggaccgcatggattt
cctgggccacctggagagaagggtttacctggacctccagggagaaaaggacccactggt
cttccaggtcccagaggtgaaccggggccacctgcagatgcggatgactgtccccgaatc
ccagggcttcctggggtgccaggcctgagaggaccagaaggagccatgggactccctgga
atgagaggccccccaggaccagggtgcaaaggagagcctgggctggatggcaggaggggt
atggatggcattcctgggtctcctgggcctcccggacgtaaaggtgacacaggagaagac
ggctaccctggaggaccagggcctcctggtcccactggggatcctgggcccaaagggttt
ggcgctggatacctcagtggcttcctcctggttctccacagtcagacggaccaggagccc
acctgccccctgggcatgcccaggctctggactgggtatagtctgttatacctggaaggg
caagagaaagctcacaatcaagaccttggtctggcagggtcttgccttcccgtgtttagc
acgctgccctttgcctactgcaacatccaccaggtgtgccactatgcccagagaaacgac
agatcctactggctggccagcgctgcacccctccccatgatgccactctctgaagaggcg
atccgcccctacgtcagccgctgtgcggtatgcgaggccccagcccaggcggtggcggtg
cacagccaggaccagtccattcccccatgtccgcagacctggaggagcctctggatcggg
tattcattcctgatgcacacaggagctgggaaccaaggaggagggcaggccctcatgtca
ccgggtagctgcctggaagatttcagagcagcaccattccttgaatgccaaggccggcag
ggaacttgccacttttttgcaaatgagtatagcttctggctgacaacagtgaaagcagac
ttgcagttttcctctgctccagcaccagacaccttaaaagaaagccaggcccaacgccag
aaaatcagccggtgccaggtctgcgtgaagtatagctag
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integrated database retrieval system
