KEGG   Thermococcus gorgonarius: A3K92_02555
Entry
A3K92_02555       CDS       T05047                                 
Name
(GenBank) DNA ligase
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
tgg  Thermococcus gorgonarius
Pathway
tgg03030  DNA replication
tgg03410  Base excision repair
tgg03420  Nucleotide excision repair
tgg03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:tgg00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    A3K92_02555
   03410 Base excision repair
    A3K92_02555
   03420 Nucleotide excision repair
    A3K92_02555
   03430 Mismatch repair
    A3K92_02555
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tgg03032]
    A3K92_02555
   03400 DNA repair and recombination proteins [BR:tgg03400]
    A3K92_02555
Enzymes [BR:tgg01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     A3K92_02555
    6.5.1.6  DNA ligase (ATP or NAD+)
     A3K92_02555
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     A3K92_02555
DNA replication proteins [BR:tgg03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    A3K92_02555
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     A3K92_02555
DNA repair and recombination proteins [BR:tgg03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     A3K92_02555
   NER (nucleotide excision repair)
    Other NER factors
     A3K92_02555
   MMR (mismatch excision repair)
    Other MMR factors
     A3K92_02555
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase DNA_ligase_OB_2 TPR_1
Other DBs
NCBI-ProteinID: ASJ01684
UniProt: A0A2Z2MCK4
LinkDB
Position
complement(439951..441630)
AA seq 559 aa
MRYSELTELYRRLEKTTLKTLKTKFVADFLKKTPEDLIEVVPYLILGKVFPDWDERELGV
GEKLLIKAVAIATGVPEREIENSIKDTGDLGESVALALKKRKQKSFFSQPLTIKRVYDTF
VKIAEAQGEGSQDRKMKYLANLFMDAAPEEGKYIARTVLGTMRTGVAEGILRDAIAEAFK
VKPELVERAYMLTSDFGYVAKIAKLEGNEGLSKVEIQVGKPIRPMLAQNAASVKDALLEM
GGEAAFEIKYDGARVQIHKDGDKVTVYSRRLENVTRSIPEVVEAIRNSLKPERAIVEGEL
VAVGEGGRPRPFQYVLRRFRRKYNIEEMVEKIPLELNLFDVMFIDGESLIETKFIERRKK
LEEIVKTSEKIKLAEQLITKNVEEAEAFYKRALELGHEGLMAKRLDSIYEPGNRGKKWLK
IKPTMENLDLVIIGAEWGEGRRAHLLGSFLVAAYDPNSGEFVPVGKVGSGFTDEDLVEFT
KMLKPLIVREEGKFVEIEPKVVIEVTYQEIQKSPKYKSGFALRFPRYVALREDKSPEEAD
TIERVAQLYELQEKFKAKK
NT seq 1680 nt   +upstreamnt  +downstreamnt
atgcgctattcagaactgactgaactctatagacggctggagaagacaaccctcaaaacc
ctcaaaactaagttcgttgcggacttcctcaagaaaacacccgaggatctgatcgaggtt
gttccttacctgatccttggcaaggtctttcctgactgggacgaaagagaactgggcgtc
ggcgaaaagctcctgataaaggccgtcgcaatagcaactggcgttcccgagagggaaatc
gagaactcgataaaggacactggcgatctgggggagagcgtggccttagctttaaagaag
aggaagcagaagagctttttcagccagccgttaacgataaagcgagtttacgataccttt
gttaaaatcgccgaagctcagggggagggcagtcaggacagaaagatgaagtacctcgca
aaccttttcatggatgccgcgccggaggaggggaagtacatagcgagaaccgtcctcgga
acgatgagaaccggcgtcgccgaggggatcttgagggatgcgatagcagaggcattcaag
gtcaagcccgagctcgttgagagggcctacatgctgacgagcgattttggctacgttgca
aagattgcaaagctggaaggcaacgagggactttcaaaggtcgagattcaggttggaaaa
cccataaggccgatgctggcccagaacgctgccagtgttaaggacgcccttctggagatg
ggtggcgaggcggcctttgagataaagtacgacggcgccagagttcagatccacaaggac
ggagacaaagtgacagtctattcaagaaggcttgagaacgttaccaggtcgattccggaa
gtggttgaggcaataagaaactccctaaaaccagagcgtgccatagtggagggcgaactg
gtcgccgtcggagagggaggaaggccgaggccattccagtacgtgctaaggcgctttagg
aggaagtacaacatcgaagagatggtcgagaaaattccccttgagctgaacctcttcgac
gtcatgttcatcgacggggagagcttaatagagaccaagttcattgagaggaggaaaaaa
ctcgaggaaattgtcaaaacgagtgagaagataaagctggcagaacagctgataacaaaa
aatgtcgaggaagctgaggcattctacaaaagagccctcgagctcggtcatgagggtcta
atggccaagagactggattcaatttacgagcccggaaaccgcggaaagaagtggctgaag
atcaaacctaccatggagaacctcgacctggttataataggtgcagaatggggcgaggga
aggagagcccatcttctcggttcattcctcgtggctgcctacgatcctaacagcggagaa
ttcgtcccggtcggaaaggtcgggagcggcttcaccgatgaggacttagtcgagttcacc
aagatgctgaagccactcatagtcagggaagaaggcaagttcgtcgaaatcgagcccaaa
gtggtcatagaagtaacctaccaggaaatacagaaaagtccgaagtacaagagcggcttc
gcactgaggttcccgcgctacgttgctttgagagaagataaaagcccggaggaggccgac
actatagagagagttgcccagctttacgaacttcaagaaaagttcaaggcgaagaagtga

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