Toxoplasma gondii: TGME49_263820
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Entry
TGME49_263820 CDS
T01093
Name
(RefSeq) DEAD/DEAH box helicase domain-containing protein
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
tgo
Toxoplasma gondii
Pathway
tgo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tgo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
TGME49_263820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tgo03041
]
TGME49_263820
Enzymes [BR:
tgo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
TGME49_263820
Spliceosome [BR:
tgo03041
]
Complex A
U2 snRNP components
U2 related factors
TGME49_263820
Complex B
TGME49_263820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Motif
Other DBs
NCBI-GeneID:
7895376
NCBI-ProteinID:
XP_002365482
UniProt:
S8F210
LinkDB
All DBs
Position
VIIb:join(305916..307649,308174..308264,308576..308800,309422..309552,310009..310071,310482..310553,310917..311072,311337..311534,311923..312414)
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AA seq
1053 aa
AA seq
DB search
MAPSSLLKAEADEEEATKRDKRRTTGGGGGDKGEEKRKNGSRKNKHLQEKREKDRKESRD
AKEATRGKDGGEGEKKEKAKKVKDEKGKKPCESGSSEKPSETQRERDTDKNRGKRKEDKR
HRHGASARLVGGEGEDVHIEERRGEKDEEERGKKAQKDTRGEGIKRHTKERSDRHSRTEK
RKRCRSRDRSKERKSSRGRHHERKDKKRGDNNRSESRRSHSRTLSRPSSAPSRSSSRETE
GPETARRDSGRLASQTVERAEKREKRGRSGSVRSGSRDSASPSREGEKVERSRTESPERA
DKQRRDSRKKEDCERRGRSRHHRHRHHRRDDKERGKKKRKRGSSSDRSASRSSSASHKRD
KSHRRRKHRRDRKRRHRDRRSPSDSSRSSSSRSDASRRSSQASATKREGDLSSQSSSAVH
LSASPTSVIVPASGDNSGAPYTVPFSYLSLLASSLRSQQAAAKETAQAEPSATGANATAP
PAASVAKPILGGIPPPPPTPPPPHVVAAAAAASASASCSSTAAAASASGAPTSSLSLEEQ
LAAVKKEIEEEHARRTQEQQKELDMALEKRPETPLAVEVSKESEAPEPQEASKEMPENSP
NPDENYNADERLGDAIGQLEDQEVVIAFAGPTADVHDPASLPLPVADVVGSERVLHSAIL
GNLLFLGFKRLMPVQRHSIPIGCAGYDICGSASTGSGKTLAFLVPMASRLLKMSPINRPF
FPGPHAQASPTGLILVPTRELALQIGEDIVRVCRGTGLTHILLIGGMPQKDQVDHINRQQ
IDIAVCTPGRLVDMCDLCKVSLSFVATLVLDEADVMLNMGFRSVIMSLLKERDLPDSRQT
MLFSATYPADLMDLLPMVFKPAYVRLSVGPANDAVPGAMNTAAKNSMVTQIVKHVEEPLK
AAALRADLEEFLSANNSQAIVFVRSKRAIHPTAHTIRLAGIQTEVLTGNRTQPERQQVFR
NFRDGRFPVLVATSVAARGLDFPNVGLVINVDMPQEMEHYVHRIGRTGRAGRPGVAISYM
NWNDKKLAPAMIHILKQHDSEIPAFLQDMANDF
NT seq
3162 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgtccagcctgctgaaggcggaggccgacgaggaggaggcgacgaagcgcgac
aagcgacggacaacaggtgggggcggcggggacaagggagaagaaaagcggaagaacggg
agcagaaagaacaaacatctccaggagaagcgcgagaaagaccgcaaggagtcgcgggac
gccaaggaggcgacgcgggggaaggacggcggggagggggagaagaaggagaaggccaag
aaggtgaaggatgagaaagggaagaaaccttgcgagagtggaagctcagaaaagccttca
gagacgcagagagaaagagacacagacaagaatcgcggcaagagaaaggaggacaagaga
cacagacacggtgccagtgcgagactcgtgggtggcgagggcgaggacgtacacattgag
gaacgtcgcggagagaaggacgaggaagaacgcgggaagaaggcgcagaaagacactcga
ggagagggaatcaaacgtcacacaaaagagaggagcgacagacatagtcgcacggagaag
cgaaagcgatgcaggtctcgggacagatcgaaggagagaaagagctcgcgaggaaggcat
cacgaaagaaaggacaagaaacgaggagacaacaaccgctccgagtctcgccgatcccac
tctcggacgctttctcggccctcctcggcacccagtcgaagctccagtcgtgaaacggag
ggaccggagacggctaggcgagactccgggcgccttgcctcccagactgtggaaagagcg
gagaagagagagaagcgcggaagatctgggtcagttcgcagtggcagtcgcgacagcgcg
tctccctccagagaaggggagaaggtcgagagaagccggactgaatctcccgagagagcc
gacaaacagcgaagagacagccggaagaaggaggactgcgagcgccgaggccgcagccgc
caccatcgccacaggcaccaccggcgagacgacaaggagcgagggaagaagaagagaaaa
agagggtcttcgagtgacaggtctgcctcgcgttcgtcttctgcgtcccataagagagac
aaatcccaccgccggagaaagcaccggcgcgaccggaaaaggagacatcgcgaccgaaga
agtccttcggactcgtctcgaagctcttcatcgcgaagcgacgcttcacgacggtcctcg
caggcgagtgcgacgaagcgagaaggagacctgagctctcaatccagctcagcggtgcat
ctctccgcgtcgccgacgagcgtgattgtgcccgcgtcaggagacaactctggagctccc
tacactgttccgttctcctacctctccctcctcgcgtcttctctccggtcgcagcaagcc
gcagcgaaagagaccgcgcaggctgaaccttccgcgactggcgcaaacgcaactgccccc
ccagctgcttccgtggcgaaaccgattttaggtggaatcccgccgcctcctccgacgcct
cctcctccgcatgtcgtcgccgctgccgctgctgcatcggcctctgcttcctgctcctcc
actgctgctgcggcgtctgcatcaggtgcaccgacgagttctctgtctctggaggaacag
ttggcggcggtgaagaaggaaatcgaggaagaacatgcgaggcgaacgcaggaacagcag
aaagagttggacatggctctcgagaagcggccggagacgcctctggctgtggaggtctcg
aaggaaagcgaagctcctgagccgcaagaagcaagcaaggagatgcctgagaactccccg
aatcccgacgagaactacaacgcagacgagcgcctcggagacgcgattggccagctggag
gatcaagaagtagtgatcgccttcgcaggacccactgcggatgttcacgaccctgcgtct
ttgcctctgccagtggcggacgtcgtcgggagcgaacgtgtgctgcactccgccatcttg
ggcaacctccttttcctgggcttcaagcgcctcatgccggtccagagacactcgattccg
attggatgcgctgggtatgacatctgcggctctgcctccacaggaagcggcaagacactt
gccttcttggttcccatggcatcgagactcctcaaaatgtcgcctatcaacaggcctttc
ttccctgggccgcatgcacaggcttcgccgactggcctcattctcgttccaactcgcgag
ttggcacttcaaatcggggaggatattgttcgggtctgtcgaggcacaggcctgacgcac
attctcctcatcggcggcatgcctcagaaagatcaggtagaccatatcaacagacagcag
atcgacatcgccgtatgtacacctggacggctggtggacatgtgcgacttgtgcaaagtt
tctttgagttttgtggcaactctcgttctcgacgaggcagacgtgatgctgaacatgggc
ttccgatctgtgattatgtctctcttgaaggaacgagacctgccggactcgcgacagacg
atgctgttttccgcgacgtatccagcagacctgatggatctcctcccgatggttttcaag
ccggcgtacgtacggctgtctgtgggtcctgccaacgatgctgtacctggtgcgatgaac
acagcagcgaagaatagcatggtgacgcagattgtgaagcatgtggaggagcccctgaag
gcagcagcgctgcgtgcagacttggaggagtttttatctgcgaacaacagccaggcgatc
gtctttgtccgcagcaagcgagcgatccacccgaccgcccacacgattcgtctcgcaggc
atccagactgaagtcctgaccggcaatcgaacgcaaccggagcgacagcaggtattccgc
aacttccgtgacggccgcttccccgtcctcgtcgctacgtcggtcgccgcgagaggcctg
gacttccccaatgtcggcctcgtcatcaacgtcgacatgccgcaggaaatggagcactat
gtgcaccggatcggacgaacggggcgcgcaggccgcccaggcgtcgcgatcagctacatg
aactggaacgacaagaaactcgcgcctgcgatgatccatatcctgaagcaacacgactca
gaaattcctgctttcctccaagacatggccaacgacttctga
DBGET
integrated database retrieval system
