Toxoplasma gondii: TGME49_275420
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Entry
TGME49_275420 CDS
T01093
Name
(RefSeq) histone lysine-specific demethylase LSD1/BHC110/KDMA1A
Organism
tgo
Toxoplasma gondii
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Amino_oxidase
zf-HC5HC2H
NAD_binding_8
DAO
Pyr_redox_2
zf-HC5HC2H_2
FAD_binding_2
FAD_binding_3
GIDA
FAD_oxidored
Pyr_redox_3
IlvN
Thi4
Shikimate_DH
HI0933_like
Pyr_redox
AlaDh_PNT_C
Motif
Other DBs
NCBI-GeneID:
7899865
NCBI-ProteinID:
XP_002371937
UniProt:
S8G459
LinkDB
All DBs
Position
X:complement(join(7239338..7240403,7240776..7241264,7241696..7241799,7242362..7242444,7242920..7243012,7243231..7243417,7244033..7247058,7247532..7247736,7248111..7251572))
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AA seq
2904 aa
AA seq
DB search
MEPFNHRGDAAFRRCPSAGQLNAALPPSVPAFMPAVVSLSGLPPDLPLGFQPPPLALSQA
GSVTQYVGVAAAFPAVPPATHSNAHPLFHPLQNPSLSTASSPHALHVSSHASPPAVCLSS
HASSRPALPPGSAFPVPTNFLGDSGAACRSRWAAHEAREERNREGRRREAERREAERREG
RKEEGRDIRGSASSNLPLLSLQPPSHRGAAANSPLLPSPPRLCPSRIAGVHTAGRSLVSS
SRLLCRAPQDSLWHPMTRLPPDSLPCSYLSSSSPSLTSSSPSLTSPSPSLTSPSPSALPA
YRAPGFLPRPAKFGGVSSARSFVGELNSAFCAERSPCVSACETFQTFACGASGSRRRSHF
SFSPFSADDTPGSEAPAGPAGNHSPRRSTSLQSLSSLSSSPSESEVEEDLAGEEPRTRVG
CPDIRVDPPACDSAFVAFSAPASASAPLPFFSPPVAACCLPSRAPGVPPELLSASLLRSR
AGRACSSASLSPQDSAQGWLHAASPPREDCLRRCLSPRLCAADVVVVSDGEECSDSERGR
GKDGDGGRLQETQDGEGDAACLSPSPVSLSRRRLHDESSLNGTEEEACASFDAGKSHSDD
AKAGEDTPPLPSHGSSASAFSVSGHSTEEGSRPHGPSRSRRSSRRTSANTPVSIMASSSS
SSSPSLSSASFSSSAASSSVFPSTASALPRAEFLSESSLLASAGVATPHCASALTPGHPR
LRSWLSFRQLRVGRPAEKKRQFLLRGKKQLKVAVIGAGMAGISAARELRDAGVKSVVVYE
ARSRVGGRCCSAEVTLHPRPELASASAQAKASRENPGLDIGDREESAEAAQAAKAPKEVK
GEEQWPLRACEPRGVLGECCDASAKRSAIEGICSSRAFSASSLPSSSSSSSSAWSSTSAV
SSVPSASASLSASASGALVVPGIDLGASWIHGIDDNPVYAICLAHRLHPFGAAKGVEVVD
DSATVGSSKRKQKASQKAVEILTDAEEVLFDEATGARVDAEVDAWAYEAHQSHQREADSS
ARRDEGNRGWRQWPAGPTGAQTELKTLLHQSLGGVLNAKMREAIRARRKRLAQPREETRN
ARKPRAAPCTEDQEPAERSRTAEETEREGEEETDVEPGKEGDSVEGRLLMWHLNNLEYSA
GADVDDLSLICWDQDDLTAFQGQHVLIWEGYKSAVEALTSDLDIRLRHEVSSISYSDSGV
TLRFADGTVSPRFDFCIVTLPLGVLKASVTADEQRATGEDAARFRSEVHAKELLPSQTLP
ARSLSTVRGDNQVSPLIGEEEEKAPDTQAENGDAERVERSSEGLHWQEEAWRVPHSGVTA
DAFREEGRNAGTERKADSRKEGQVDKITEKEASRMEGNAGEELGIELECKGLVDVCGTDE
TRGIQGEVRGGERGLRRFVCIENGDPCVGDSVVKNIEKSLLPRHSSLHSSESNGDHLLSS
AASSRHNAAAPTSGGAEPPGGDSGSGPLPVSLTSSCSSSRVSSSLSSSRLSSFSSSFPLS
NGNCADGEANPGGGYEPRDAEKEDERGTGGDWCRPQDGDSSLHSSSSFVAPSSLTAPSSS
ASVRLAEARGADSSTSAFLKSEVCEEASAPVKARAARSDLDVDAEIADALHDVPVDFTFP
PDLLPFLIPSQKRRGNGRRICKKQALARLRAADGWAKKSREATPEAISSSGVRTPRPPGG
DTPKDAQQGVEGVKGEGEERDAARTEEGGVDASSSASSWFALSKERCESRRGLVAFDPPL
PEWKREAVKLLGMGNMNKVALVFESPFWLHEDDDGDGDEGEAEDGDKGEAEETRGPETLE
SVGNGEDEREERRTEDSQVARPRGEEGDASDRRDGSGGEGDRKREEESGKGGLTDADGET
RKNGNCRGVEETEMRESTSDERMDANSKGDEQREREGEIGGNEDEMGGREGDVRKTGDTK
GERDTRGNFDESLTPCGSRSLPSDNGPLSSSLSASRVSPPEIPYPVASECICDDSDSRPG
SVAPLCSLECPSTSSLLFPASSTSSEPSLASRPTPPFSSASPASSSVSSSLSNSSSSCSS
STVPTSSSSPLSSAALAPAFAPSSAPLLSPLSASVFSSVSSSVPASASAASSPWLSSQTR
SALRRCENPTGAKGGRGGEKGGGRSGRRRREKTKGSEAPERPRQAREWRDETEEREDEPE
VNAKERRSLRPRRERREQEKFSDSEGRETKRRRTRKNRVKTVPRQRGWASREKGRYAQLV
YLHPKPIILVLVPGTFSFLSEKRPKAELVCEALRVVAEIHEGRIEAPIKAFVSRWGKDPF
ARGSYSYLPPGTTGRDYDLLSYPVHHRLLFAGEHTIRPYPSTVHGACLSGRREAARILDW
TAGLMEQHAFLKWFQHAEEGLWFSVDLSEMEAAPSYFEDCLEGPTAAEREEWFAGSIRCA
FCGEAQTFQRPFIGCVSVPVSHAPSASSTSPPCEFLAEEDGKTSRDSLLQRGTEAPLSQA
GEAIERINQKQRRLRFVVHEDCCYYTPGVVSDSEGSRWFNVGRAILAASLNACACCGLPG
ASIPCAAAECSQALHLPCAQRELRWPRYETKSAVRPLFCPSHQRLLSLPCEGLSASPRAL
KEAAGEAETGDDARARREEEEKKAERRNVGMAVTAASASACIAASLSLAAGLRSACDLSS
SALARKENSRVLRRREGPEKDGGEMREKTGETEEKTRMKTEAHPVIISDDGEESEESVRR
ILRTPGDQNRSRLPPFLAASLSSLRPFLSNLSHSGRHKPSLHAPFSSQGSHASFPALSSL
PALSSLSSFSSHSSLPFQSSWPSGGSSSPSFGRACTPGRPVFPVSALTATVASQRGRILC
EDIKPRERGRARMQSGAREEKNLTSELRCLLRRLERAVECLQGPSETKRGPAGERDRSLT
VIDVDDSSVHKIRDRKTIIDLEDA
NT seq
8715 nt
NT seq
+upstream
nt +downstream
nt
atggagcccttcaatcaccgcggagacgctgcgttccgccgttgtccctccgccgggcaa
ctgaacgctgccctcccgccttcagtccccgcctttatgcctgccgtcgtttctctttcg
ggacttccacccgatctgcctcttggcttccagccgcctcctctcgctctatcgcaggca
ggctccgtcacccagtacgtaggcgtcgccgcggccttccccgcagttcctccagccacg
cattccaacgcgcacccgttgttccatccccttcaaaacccttccttgtcgaccgcttct
tctccccatgctcttcatgtgtcatctcatgcttctcctcccgctgtttgtctttcttcg
catgcctcctcgcggcctgcattgcctcctgggagcgcctttccggtgcctacgaatttc
ctcggagacagcggagctgcgtgccgctcgcgctgggcggcccacgaagcgcgagaggaa
cgaaacagagaaggaagacgaagagaagccgagcgaagagaagccgagcgaagagaagga
aggaaagaggaaggcagagacattcgaggatctgcttcttcgaatctgcctctgctttcg
ctgcagccgccctctcaccgcggtgccgctgcgaactctccgctccttccctctcctccg
aggctgtgtccttcgcgcatcgcgggtgtacatacagctgggcgatccctcgtctcgtcc
tcgcgcctcctctgccgcgcgcctcaagactctctctggcatcccatgacgcggctgcca
cctgattccttaccctgttcttatttatcttcttcttctccttctcttacgtcttcttct
ccttctcttacgtctccttctccttctcttacgtctccttctccttcggcgttgccggct
tatcgggccccagggttcttgcctaggcctgcgaagttcggcggagtttcgtctgctcgc
tcttttgtgggtgagttgaattctgcgttttgtgctgagcgttcgccgtgtgtctctgca
tgcgagacattccagactttcgcctgtggcgcctctggcagtcgtcgccgttcgcacttc
tcgttttctcctttctctgctgacgatacacccggcagcgaagcgcccgcaggccctgct
ggaaatcactctccgcgacgctcgacctctctccagagtctttcttctctctcttcctct
ccgtccgaaagcgaggtcgaggaagacctggctggcgaggagcctcggacgcgggtcggg
tgtccagacatccgagttgatcctccagcctgcgactccgccttcgttgctttctcggcg
cccgcgtcggcatccgcgcccttgcccttcttttctccgcctgtcgccgcctgttgtttg
ccttctcgagctccgggtgtgccgccggaacttctctctgcctcgctcctccggtcccgc
gccggtcgtgcctgctcgtctgcttctctgtctccgcaggacagcgcgcagggctggctg
catgcagcttcccctccgagagaagactgtctgaggcgttgcctgtctccccggttgtgt
gcagccgacgtcgtcgtcgtctccgacggcgaggagtgttcggactctgagaggggtcga
ggaaaggacggagacggaggacggctgcaggagacccaagacggagaaggagatgccgcc
tgtctctcgccttctccagtgtctctgtctcggcgccgcctccacgatgagtcctcattg
aacggaacggaggaagaggcttgcgcttcgttcgatgctgggaaaagccactccgacgac
gcgaaagctggggaagatacgccgcctttgccgtcgcatggaagctctgcttcggccttc
tcggtgtctggacactcgaccgaagaaggcagtcgcccacacggtcccagtcgaagccgg
cggtcgagtcgacgaacatcagccaacaccccagtctcaataatggcttcctcttcttcc
tcttcgtctccgtctttgtcttctgcatcgttttcttcctctgctgcctcttcttcggtg
ttcccttcgactgcgtctgcgttgcctcgtgcagagtttctttccgagtcgtctctgctc
gcttcggcgggtgtcgcaactccgcattgcgcgtcggccttgacgcctggccacccgcgt
ctgagatcgtggctttcgttccgtcagctgcgtgtgggtcgccccgcagagaagaagaga
cagttcttgcttcgaggaaagaagcagctgaaagtcgccgtgattggagctggcatggca
gggatcagcgccgctcgcgaacttcgagacgctggcgtcaagtccgtcgtcgtctacgaa
gcccgcagccgcgtgggcggtcgctgctgcagtgcggaagtcacgctgcacccgcggccg
gagttggcgagcgcgtcggcgcaggcgaaagcctcgagagagaatccaggactcgacatt
ggagaccgagaggaaagcgcggaggcagcgcaagcggcgaaggccccgaaagaagtgaag
ggagaggaacaatggcctctcagagcctgcgaaccacggggcgttctgggggagtgctgt
gatgcaagcgcgaaacgcagcgcgattgaaggcatctgctcttctcgcgcgttttctgcc
tcttctttgccttcctcttcttcctcttcctcttctgcctggtcgtcgacctctgcggtt
tcctctgttccgtctgcgtctgcgtctttgtctgcgtctgcgtcgggagcgcttgtggtc
ccgggcatcgacctgggggcctcgtggatccacggaatcgacgacaacccggtgtatgcg
atttgcctggcgcaccggctccacccgttcggcgcggcgaaaggcgtcgaggtggtggac
gactcggcaactgtggggagttcgaaacggaagcaaaaggcctcgcagaaggcagtggag
attctgacggatgcggaggaagttctcttcgacgaggcgacaggtgctcgcgtcgacgcg
gaggttgacgcctgggcgtacgaagcccaccagagccaccagcgggaggccgacagttct
gcgaggagagacgagggcaaccgagggtggcgacagtggcctgcggggccgacaggagcg
cagaccgagctgaagacgcttctgcaccagtcgctgggtggagtgctgaacgcgaagatg
cgcgaggcgattcgcgcgaggagaaagcgacttgcgcagcctcgggaagagacgaggaac
gcgagaaagcctcgggcggcaccctgcaccgaagaccaggagccagcggagaggtcgcgg
acggcagaggagacggagagagaaggtgaagaagagacggatgtggagcctggaaaggaa
ggggacagcgtcgagggaagactcctcatgtggcatctcaacaacttggaatactcggca
ggtgccgacgtggacgacctttcgttgatctgctgggaccaggacgatctgacagccttc
caaggacaacatgtcctcatctgggaggggtataagtcggctgtggaggcgctcacaagc
gatttggacatccgccttcgacacgaggtctcgagcatttcttattcagactcgggcgtc
actctgcgcttcgcagacggcactgtttctcctcgttttgacttttgcattgtcaccctg
cctcttggcgtattgaaagcgtcagtgactgctgacgaacaacgcgcgacgggagaggac
gctgctcgttttagatccgaggtgcatgcgaaagaacttctcccttctcaaacgctgcct
gctcgctctctgtcaaccgtcaggggggacaaccaagtttctcctctcataggggaagag
gaggagaaagcacctgacacgcaagcagagaacggggacgccgagagagtggagagaagc
agcgaaggtctccactggcaagaggaagcctggagagttccgcacagcggcgtcaccgca
gacgcgttccgagaagaaggcaggaacgccggtactgaaaggaaagcagactccaggaaa
gaagggcaagtagataaaatcacagaaaaagaggcgtcccgaatggaaggaaacgcgggt
gaagagctggggatcgaactcgaatgtaaaggcctggtggacgtatgtggcaccgacgaa
acgagaggaatccagggagaggtgagaggtggagaacgaggtttgaggagatttgtctgc
atcgagaatggagacccatgcgtcggtgattccgttgtcaaaaacatagagaaatctctg
ctgccgcgtcactcttcccttcactcctctgaatctaacggagatcaccttctctcttcg
gccgcctccagtcgacataacgcagccgccccaacctcaggtggggcagaacctcccggc
ggagacagcggcagtgggcctctccctgtctctctaacatcttcttgttcttcttctcgt
gtgtcttcttctctttcgtcttctcgtctttcttctttctcttcttcgtttcctctctcc
aatgggaactgtgcagacggcgaagcaaatccagggggaggctatgagccccgcgatgca
gaaaaggaggacgagagaggcaccggtggcgactggtgtaggcctcaagacggcgactcc
tcgcttcattcttcctcctctttcgtcgctccttcgtctcttactgctccttcttcctct
gcttcagtgcgtctggctgaagctagaggcgccgattcgagtacttccgccttcttgaag
agcgaggtgtgtgaggaggcgtcggcacctgtgaaggcgagggcggccaggtctgatctt
gatgtagacgccgaaatagctgacgcgcttcacgacgttcccgtggactttacgtttcca
ccggatcttcttccgttcctaattccttcgcagaagcgccgagggaacggccggagaatc
tgcaaaaagcaggcgctcgcgcgcctgcgggctgcagacggctgggcaaagaaatctcgc
gaggcgacgccagaggcaataagcagctcgggtgtacgtacacctcggccgccaggaggc
gacacaccgaaagacgcgcagcagggagtggagggagtgaagggagaaggcgaggagcga
gacgcagcgaggacggaagagggcggcgtcgacgcttcgtcttctgcctcttcgtggttc
gccttgtccaaggaaagatgcgagagtcggcgaggactcgtcgccttcgacccgccgctt
ccagagtggaaacgcgaagccgtcaaactcctgggcatgggcaacatgaacaaagtggct
ttggtcttcgagtcgcccttctggcttcacgaagacgacgacggagacggagacgagggg
gaagcggaggacggagacaagggagaagcggaagagacccgagggccggagacgctggaa
agtgtcgggaacggggaggacgagcgagaagagcgacgaacggaggacagccaggtcgcg
aggccgagaggagaggagggagacgcgagtgaccgccgagacgggtcaggcggcgaggga
gatcgaaagagagaagaagaaagcgggaagggaggactcacagatgccgatggagagact
cgcaaaaacggaaactgcagaggcgtggaagagacagagatgagagagtcgacctccgat
gaacggatggacgcaaacagcaaaggcgatgaacagagagaacgtgaaggggaaatagga
ggaaatgaagatgaaatgggagggcgtgaaggcgatgtgagaaagactggagacacaaag
ggagagagagacacccgtggcaatttcgatgagtcactgacgccttgtggttctcgttcg
ctgccttcggacaatgggccgctttcttcgtctctctcggcctcgcgagtgtctccgcca
gagattccttatccagttgcttctgaatgcatttgtgacgactccgattcgcgtccgggc
tccgttgcgcctctctgctcgctcgagtgtccttcgacttcttccttgcttttccccgct
tcgtctacctcttctgaacccagtcttgcttctcgccccacacctccgttctcgtctgct
tctcctgcgtcctcctccgtttcctcttctctctcgaattcctcgtcttcgtgctcttcc
tccactgtccctacttcctcctcgtctcctctgtcttctgccgctcttgcgcctgctttc
gctccctcgtcggctcctctcttgtctcctctgtccgcgtcggttttttcctcggtctcc
tcctcggttcccgcgtctgcgtctgcggcttcttcaccgtggctttcttctcagactcgc
agtgccttgcggcgatgcgagaatcctaccggcgccaaaggcggtcgtggcggcgagaag
ggcggcggccgaagcgggagacggcgccgcgagaagacgaaaggaagcgaagctccagag
agacccagacaagccagagagtggcgagacgaaacggaggaacgcgaagatgagccagaa
gtgaatgcgaaggagagacggtccttgaggccgcgacgcgagcggcgagaacaggaaaag
ttctccgattctgaaggccgagaaacaaagaggcgaaggacgcgaaaaaacagggtcaag
acggtcccgcgacagcgtggatgggcctccagggaaaaaggacgatatgcgcagctcgtc
tacctgcacccgaagccgatcattttggttttggtcccgggaaccttttcatttctgtct
gagaagagacccaaggcggagctcgtctgtgaggccttgcgcgtcgtggcggagatccat
gagggacggatcgaggcgccgatcaaggcctttgtttctcgctggggcaaagacccgttc
gccagaggcagctactcctacctgccgccaggcaccacaggaagagattatgatctcctt
tcgtacccagttcaccatcgactgctctttgctggcgagcacacgattcggccgtatcca
agcactgtgcatggcgcgtgtctcagcggcagacgagaggccgcgcggattctcgactgg
acggcgggtctgatggagcagcatgccttcctgaagtggtttcagcatgccgaagagggg
ctgtggttctccgtcgatctgagcgaaatggaggcggcgccgagctacttcgaggactgc
ctcgaaggcccaactgcagcggagcgtgaagaatggtttgccggcagcattcgctgcgcc
ttctgcggagaggcccagacatttcaacgcccattcatcggctgtgtctccgttcctgtg
tctcacgctccttctgcttcctccacttctcctccttgcgaatttctggctgaagaggat
ggaaagacgtctcgcgactcgctcttgcagcgcggaaccgaggcgcctctgtcgcaggct
ggagaagcgatagagaggataaaccagaagcagcgccgtctccgtttcgtggtccacgag
gactgctgttactacacaccgggcgtcgtcagcgacagcgaaggaagtcgatggttcaac
gtaggtcgggcgattttggcagcctcgctcaacgcatgcgcctgctgcggcctgccgggt
gccagcatcccttgtgctgcagctgaatgctctcaggcgcttcacttgccttgtgcccag
cgcgaactccgctggccgagatacgagacgaagtcggcggtgcggccgctgttctgtccg
tcgcaccagcgcctgctgtctctgccgtgcgagggcctttcagcttctccacgcgccctc
aaagaagccgccggggaagcagagacaggggacgacgcgagagcgcggcgcgaggaagaa
gagaagaaggccgagagaagaaacgtcgggatggcagtaacggccgcaagcgcttctgca
tgcattgcggcttctctgtcgctcgcggcaggtttgagatctgcgtgcgatttgtcaagc
tcagccctggcgaggaaagagaactcgcgagttctgaggagacgcgaaggcccggaaaaa
gatggtggagagatgagagagaagacgggagagaccgaggagaagacgcgcatgaaaaca
gaggcgcatccggtcatcatttcagacgacggcgaagaaagcgaggagtctgttcggcgt
attctgcgaactccgggagatcagaacagatccagactccctccgtttcttgctgcctct
ctctcttctcttcgtccttttctctcgaatctgtcccactccggaagacacaaaccttct
cttcatgctccgttttcttctcaaggttctcatgcttcgtttcctgctctttcttctctt
ccggctctctcttctctctcttcgttctcctctcactcttctctccctttccagtcttct
tggccttccggaggttcgtccagtccgagtttcggacgcgcatgtactcctgggagaccg
gtttttccggtgtctgcgttgacagccacggttgcttctcagagagggaggattctttgt
gaagacataaagcctcgcgagcgggggcgggcgcgcatgcagtctggtgcgagagaggag
aagaatttgacctccgaacttcgctgtctcctcaggcgactggagcgcgcggtggagtgc
ctccaaggacccagcgaaaccaagcgaggacccgcaggagaaagagacagaagcctcaca
gtcatcgatgtcgacgactcgtctgttcacaaaataagagataggaaaacgatcatcgat
ctagaagacgcttaa
DBGET
integrated database retrieval system
