Taeniopygia guttata (zebra finch): 100218648
Help
Entry
100218648 CDS
T01082
Symbol
FREM2
Name
(RefSeq) FRAS1-related extracellular matrix protein 2
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
100218648 (FREM2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Calx-beta
Big_9
Motif
Other DBs
NCBI-GeneID:
100218648
NCBI-ProteinID:
XP_002194679
Ensembl:
ENSTGUG00000011967
LinkDB
All DBs
Position
1:complement(61697617..61821903)
Genome browser
AA seq
3164 aa
AA seq
DB search
MQPLLTGPRRLLAGLLLLLAGCAWAGAAEPLSGSSAAVSSPWSPEADPVVVANRGLRVPL
GRSAWLDPARDLVLQVQPGDRCHLTVLDEDPLWQRPGRLSPRRFPCDFGAREVQYTHLGG
RSPARDRVRLQLRYDSPSRALVLPLVLEVEVLFTQLEIVTRNLPLTVERLRGTSNPLDAR
SLEFAFEPGRQRCRVGLLPLLAGLPRYGEILNYPPAATGGGGEAAGGGPMPSLMWDCEEF
LRLGLRYRHTAAGGSPNRDLVPLVAELREAAGGGALLKREYFQVLVRIRAGSENVAPKPS
FLAMLMMEVDQFVLTALTPDMLSAEDAESPPDLLLFNITSPFGPGQGHMVSTDDRSLPVT
SFSQRDVQELRIAYQPPTEDSDRERLFELELEVLDPEGAASEPFTFVIVVKPMNTLAPVV
TRNTGLVLYEGQSRPLSGPGPSPNLVVSDEDDLEQVRVSVVAGLRHGHLTLLEDTPGPAA
PRKHFTVAELAAGRVIYQHDGSEAPLSDNLILRLEDGGSRHRVEFLFPITLVPTDDQPPL
LNANTGLAMAEGETVPITARALSATDIDSQDAILLFTVESGPTAGQLLLRQAQPPPGWEE
EEEEEGFSWRKVPGLAGSSVIYEKPVREWLQQDIVEGRLFYHHFGAHSPGPGVVLDQFIF
RVQDDNDPPNRSGPQTFVIRVHPVDRLAPELHSSSSLHLIVAEQQVTPLRRKHLCYTDQD
SGDRELRYTVIQPPTDTDTNHPPDAYGARLGSLVLTEDHSVEVTHFTQAQINHHKISYRP
PQEELGVAPHLIQFQYQVQDAAGNVAKGTFTIYLQPVDNQPPKITNTGFTLPEGGSHVLS
PTELDASDTDTELARLRFILTQAPRYGQLQLSGYSLVPGGIFGLEDIRQGRVVYVHSGAE
TNSDTCRLDVSDGVHFVPITLKMSVHPVDDEVPTLRLPPGTLGSYLDVLENGAAEITANV
IQGTDEDTDDFMLTFIVEDPPQHGSILVQGVPAERFSQRDLLDGAVVYAHTGGEIGLLPK
EDAFNLTLSDLSEKWRVRGNIVQGVSVLVTILPVDSQAPEIFVGEQFVVTEGDKRVITLA
HLRAEDVDTPSDDILCTIVAQPTSGYVENISPAPGSEKSRAGVAVSAFTLKDLRQGHIFY
VQSIHKGVEPVEDRFAFRCSDGINFSQRHFFPIVIVPINDEEPEIFLREFVVMEGMSLVI
DTPILNAVDADVPADELTFTITRLPRHGHIVNQLVNGTVLVESFTLDQITESSSILYEHD
DSETRVDGFEVQLSDGKHTIRKMVPIMVIPVDDETPRMAINDGLEIEIGETRTINNRILK
ATDLDSEDKTLTYIITYGPGQGLLQKIKSSGGVENITRGMNFTQDEVDRNLIRYVHFGQQ
GVRDLIKFDVTDGINPLIDRYFYVTIGSIDIVFPDVISKGVSLKEGGKVTLTTDLLSTSD
LNSPDENLVFTITRPPVRGHLECTDQPGVPISTFTQLLLAGNKIYYIHTSEDEVKMDSFE
FEVTDGYNPVFRTFRISISDVDNKKPVVTIHNLVVSENEYKLITPFELTAEDRDTPDALL
KFIITQIPIHGQIMFNNSKPVTTFTKQDLNENLISYKHDGSESVEDSFSFTVTDGTHTDF
YVFPNTVFETRKPQTMKIRIMAVDNSVPQVVINKGAQTLRVLATGHIGFLITNKVLKVED
RDSLHVTLKIRITEGPRHGFLIHLGKGNHSISQFTQADIDDMKICYVLRGSDNATSDIFH
FLVEDSGGNKLKNQHFRLNWAWISLEKEYYLVNEDTKYLDVVLKRRGYLGETSFISISTK
DGTAKKEKDFRGKAQKQVQFNPGQTLATWRVRILSDGEHEHSESFQIVLSEPVMAILEFP
AASTVEIIDPGDESTVFIPQSTYTIEEDVGELFIPVRRSGDVSQELMVICYTQQGTASGT
APTSVLSYSDYISRPEDHNSILRFDKDEREKTCRIVIIDDSLYEEAETFDVLLSMPMGGR
IGAEFPSTRITIVPDKDDEPAFYFGNDEYYVDESAGYIEVRVWRTGTDLSKAASVTVRSR
KSEPATAEAGVDYVGISRNLDFSPGVNMQTFRVIILDDLGQPVLEGTEKFELVLRMPTNA
ALGEPSKTTIFINDSVSDLPKMQFKESVYVANENDGQVSAVIYRSGDIRYTSTVRCYTRQ
GSAQVMMDFEERPNTDSSIITFLPGETEKPCTLVLMDDTFHEEEEELRLVLGTPRSDSSF
GASVGEQNETLIKIRDDADKAIIKFGETKFSVSEPKDTRQVAIVKIPVLRLGDTSKVSVV
RVHTRDGSATSGEDYHPISEEIEFKEGETQHFVEIEVLFDGVREMREAFTVHLKPDENMV
AEIQTVKAIVYIEEMNSMADVTFPSVPQVASLLIYDDTSKAKDRASPIAGYPVICITACN
PKYEDFDKTGSICASENINNTLTQYRWLVSAPTGPDGVTSPMKEIDFDTFFTSSKMITLD
SIYFQAGSRVQCAARAVNSDGNEGLELMSPIVTISTSEGLCQPRISGVVGAEPFSAKLRY
TGPEDPDYANLIKLTVTMPHIDGMLPVISTRELSNFELTLSHDGTRVGNHKCSNLLDYTE
VKTHHGFLTDATKNPDVIGETIPYQYSPTIRGFNTLRFYRNLNLEACLWEFISYYDMSEL
LTDCGGTIGTDGQVLNLVQSYVTLRVPLYVSYVFHSPVGVGGWQHFDLQSELRLTFVYDT
AILWKDGIGSPPEAELQGSLFPTSMRINEEGRLVVNFKTEARFHGLFVMSHPASSLTSMV
MSVDHPGLTFSLSLIRSEPTYNLPVQQWSFLSDFAVRDYSGMYTVKLIACTTAPHQEYSL
PVICNPREPITFDLDIRFQQVSDPVAAEFSLNTQMFLLSKKTLWLSDGSMGFGQESDVTF
SEGDVIYGRVMVDPVQNLGDSFYCSIEKVFLCTGADGYVPKYNPSNTEYGCLADSPSLLY
RFKIVDKAQPETQATSFGNVLFNAKLAIDDPEAIPLVKQPGSDGFKVDSTPLFQVSLGRE
WYVHTIYTVRSKENVNRGIGKRSVEHQYHSLLSAGSPGASPQRRQKRGTEQAPELARDIG
VENNRGTNIQHIALDRTSRKQVPQREVALNGVLPRELNNQNAGLSIVTIIGGAAAVFLAI
CLIAIIVLLLKWKRNSDKKESTNESGSNEPMMLPHNYSNDSSEV
NT seq
9495 nt
NT seq
+upstream
nt +downstream
nt
atgcagcctctcctcaccgggccgcggcggctgctggccggcttgctgctgctgctggcc
ggctgcgcctgggctggggcggcggagcccctttcaggcagcagcgctgcggtctcctcg
ccgtggtcgccggaggcggaccccgtggtggtggccaaccgcgggctgcgggtgccgctg
ggccgctccgcctggctggaccccgcgcgggacttggtgctgcaggtgcagccgggtgac
cgctgccacctcaccgtgctggacgaggacccgctgtggcagcgcccgggccgcctgagc
ccccggcgcttcccctgcgacttcggagcccgcgaggtgcagtacacgcacctgggcggc
cgcagcccggcccgggaccgcgtccgcctgcagctgcgctacgactccccgagccgcgcc
ctggtgctgcccctggtgctggaggtggaggtgctcttcacccagctggagatcgtcacc
cgcaacctgcccctcaccgtggagcgcctgcggggcaccagcaacccgctggacgctcgc
agcctggagttcgccttcgagccgggccggcagcgctgccgagtggggctgctgccgctg
ctggccgggctgccccgctacggagagatcctcaactacccgccggcggcgacgggcggg
ggcggggaagcggcggggggcggcccgatgccgtccttgatgtgggactgcgaggagttc
ctgcgcctggggctgcgctaccggcacacggccgccggcggctccccgaaccgcgacctg
gtgccgctggtggccgagctgcgggaggcggcgggcggcggggcacttctgaagcgcgag
tacttccaggtgctggtgcggatccgcgccgggagcgagaacgtggcccccaaacccagc
ttcttggccatgctaatgatggaggtggatcagtttgtgctcaccgccctcacgcctgac
atgctgtcagctgaggatgcagagtcacctcccgatttactgctcttcaacattacctct
ccctttggtcctggccaaggccacatggtcagcacagacgaccggagcttgcctgtcacc
tctttcagccagcgggatgtgcaggagctgcgcattgcctatcagccgcccacggaggac
tctgatcgggagaggctctttgagcttgaactggaagtgttggacccagagggtgctgcc
tcagagccctttacctttgtgattgtggtgaagcccatgaacaccctggcacccgtggtg
acccgcaacaccggtctcgtgctctatgaggggcagtcaaggcccctttcgggcccaggt
cccagccccaacctggtggtcagtgatgaggatgaccttgagcaggtgcgggtgagtgtg
gtagcagggctgaggcatggccacctcactctcctggaggacaccccaggacctgctgcc
ccacgtaaacactttacagtggctgagctggcagcaggccgagtcatttaccagcacgat
ggcagcgaggctccactcagtgacaaccttatcctgcggctggaagatggtggctctcgc
caccgtgttgagttccttttccctattaccctggtgcccactgatgaccagccaccccta
cttaatgctaacacagggcttgccatggctgagggtgaaacagtgcccatcaccgctcgt
gctcttagtgccactgacattgactcgcaggatgccatcctgctcttcacagtggagtct
ggccccacggctgggcagctcctgctccgtcaggcacagccacctcctggctgggaagag
gaggaagaagaggagggcttttcttggaggaaggtgccaggtttagcagggagctccgtc
atctatgaaaaaccagtgagagagtggctgcaacaggacattgtggaagggcgtcttttt
taccaccactttggggctcacagccctggccctggggttgtgttggaccagttcatcttt
agagtccaggatgacaatgacccacccaaccgctctggaccacagacttttgtgatcagg
gttcatcctgtagacagattagccccagagctccacagtagcagcagcctgcatttaata
gttgcagagcagcaggtgacccccctgcggaggaagcacttgtgttacacagaccaggac
tcaggggaccgtgaacttcgttacacagtaatccagcctcccactgacactgacaccaac
caccctcccgacgcatatggagcgcgccttggatccctggtgctgactgaggatcactct
gtggaagttacacattttacccaagcccagatcaaccatcacaagatctcgtaccgccct
ccacaggaagagctgggggtggctcctcatttgattcagttccagtatcaagtgcaagat
gcggctggcaatgtggccaaagggactttcaccatctacctacagcctgtggataatcag
cctcccaaaatcactaatactggcttcactttgcctgaaggaggcagccatgtccttagt
ccaactgagctggatgccagtgacacagacactgaacttgcccgtctcagatttattctg
acccaggctcctcggtatgggcagttgcagctctctgggtacagtctggttccaggcggt
atctttggcctggaggatatcagacaagggagggtggtgtatgtgcacagtggagctgag
accaacagtgatacttgcaggcttgatgtgagtgatggggttcattttgtgcccatcaca
ctgaaaatgagtgtgcacccagttgatgatgaggttcctacactacgattgcccccggga
actcttggttcctacctagatgtgctggagaatggtgctgctgaaatcactgctaacgtc
attcagggcacagatgaggatacagatgactttatgttgaccttcattgtagaggatcct
cctcagcatgggagcatcctggttcaaggggtgcctgcagagagattttcccagagagat
ctgctggatggtgctgtggtatatgctcacactggtggcgaaattggtcttctgcccaaa
gaggatgctttcaaccttaccttgtctgacctgtctgagaagtggcgtgtcaggggcaat
attgttcaaggagtttcagtcttggtgactattcttcctgttgacagtcaagctccagaa
atctttgtgggggagcagttcgtggtgacagaaggtgacaaacgggtcattactcttgct
cacctcagagctgaagatgtggatactcctagtgatgatatactatgcacaattgttgct
cagcccacatctgggtatgtagagaacatatctcctgccccaggatctgaaaaatccagg
gcaggtgtagctgtaagtgcttttactttgaaggacctccgtcaagggcacattttttat
gtccagagtatacataagggtgtagagcctgttgaagacagatttgctttccgctgttct
gatggcattaacttttcccagaggcactttttccccattgtaattgtaccgatcaatgac
gaagagcctgaaatcttcctccgagagtttgttgtgatggaaggcatgagcctggtgatt
gatacccctatcctcaatgcagttgatgcggatgtccctgctgatgagttaacgttcaca
atcaccagacttcccaggcacggccacattgtgaaccagctggtcaatggaactgtccta
gtggagagcttcaccttggatcagataacagagagctccagcattctctacgaacatgat
gactctgagaccagggtggacggttttgaggtgcaactctcagatggtaaacacaccatt
aggaaaatggtgcccatcatggttattcctgtagatgatgagacgcccagaatggccatc
aatgacggtttggagattgaaataggggaaactagaactattaataacagaatattgaag
gctactgatcttgattctgaagacaagaccttgacatacattataacttatgggccagga
caaggtctcttacagaaaataaagtcttcaggtggagttgaaaatatcacccggggaatg
aacttcacccaagatgaagtggatagaaatttgattagatatgtgcattttggccaacaa
ggagttcgtgatctcatcaagtttgatgtgacagatggaataaatcctctcattgaccgc
tacttttatgtgacaataggcagcattgatattgtcttcccagatgttatcagcaaagga
gtttctctgaaagaaggagggaaggtaacccttactactgatttgcttagtaccagtgac
ctgaatagtccagatgagaacttagttttcaccattaccagaccacctgttcgtggtcat
cttgaatgcacagatcagcctggggtacccatctccactttcactcaactcttgttagca
ggcaataaaatctattacattcatacttcagaagatgaggtgaaaatggacagctttgaa
tttgaggtgactgatggctataaccctgtgtttcgtacattcagaatttctatcagtgat
gtggacaataagaaacctgttgttacaatccataacctggttgtgagtgaaaatgaatac
aaactgataaccccatttgaactgactgcagaagacagagatacacctgatgcactgcta
aaatttatcatcactcaaataccaattcatggccagatcatgttcaataactccaaacca
gtcaccaccttcactaaacaagatctgaatgaaaatctaatcagctacaaacatgatggc
tcagaatcagttgaggacagtttctctttcactgttacagatggcactcatactgatttc
tatgttttccccaacactgtgtttgaaacaaggaagcctcagactatgaagattcgaata
atggctgtggacaacagtgtacctcaagttgtaataaataagggtgctcagactctccgt
gttctggccactggtcacattgggtttctgattaccaacaaagtgctgaaagtggaagac
agggacagtttacatgttactcttaagatcagaatcacagagggtccacgccatggcttc
ctgattcacctggggaaaggcaaccatagcatcagccagttcacccaagctgatatcgat
gatatgaagatatgctatgttttacgagggagtgacaatgccacaagtgacatttttcat
tttttggttgaagacagtggaggcaataagctgaagaatcaacattttcgcctaaactgg
gcatggatctccttagaaaaggagtattacttagtaaatgaagacaccaagtatcttgat
gttgttctaaaacggagaggttacctgggagaaacctcttttataagtattagcaccaaa
gatggtactgccaagaaagagaaagacttcagaggaaaagcccagaagcaagtacagttt
aatcctggtcaaaccttagctacatggcgagttcggattttgagtgatggtgaacatgaa
cattctgagtcctttcaaattgttctttccgagcccgtcatggcaattctggaatttcct
gctgcatccacagtggaaattattgacccaggagatgaatcaacggtctttattcctcag
tccacctatactattgaagaagatgttggtgaattatttattccagtcagaagaagtgga
gatgtgagtcaggaactgatggtcatctgctacacacaacaaggaacagcatctggcact
gccccaacctctgtactttcctactctgactacatatccaggccggaggatcacaacagc
attctacgttttgacaaagacgagcgagaaaaaacgtgtcggatcgtcatcatagatgat
tccttgtatgaagaggctgagacctttgatgttttgctgagcatgcccatgggtggaaga
attggtgcagaattcccaagcactcgcattaccattgtacctgacaaggatgatgaacca
gcattctactttggaaatgatgagtattatgttgatgagagtgctggctacattgaggtg
cgtgtctggaggactggaaccgatctgtccaaagccgcctctgttacggtgaggtcccgc
aagtctgagccagcaactgcagaggctggagtagattatgtaggcattagtcgtaatttg
gatttttcacctggagtcaatatgcagacgtttcgtgtgataattctggatgatcttgga
cagccagtgttagaaggaacagagaagtttgagcttgtgctaaggatgcccacgaatgct
gcccttggagaacccagcaagaccaccatcttcattaatgactcagtgtctgatttgcca
aagatgcagtttaaagaatctgtgtatgtagccaatgaaaatgatgggcaggtttctgcc
gtgatatataggagtggggatatccgatacacatccactgtgagatgctatacaaggcaa
ggctcagctcaggttatgatggacttcgaagaacgtcctaacactgacagttccatcatc
acattccttcctggggaaactgagaagccttgcacactggtgcttatggatgatactttc
cacgaggaggaagaagaactacgcctagttcttggcactccaagaagtgattcttccttt
ggtgcctctgttggcgagcaaaatgagacgctgataaagattcgggatgacgcagacaag
gctataattaagtttggtgagaccaaatttagtgtgagtgaaccaaaggacacaaggcaa
gtagcaattgtgaaaataccagtgcttcgtctgggagacacttccaaagtttctgttgtg
agagttcatacaagggatggatctgctacttctggagaagactatcaccccatatcagaa
gaaattgagttcaaggagggtgaaacacagcactttgtggagattgaagttctctttgat
ggagtaagggagatgagagaagccttcactgtccacctgaagcctgatgagaacatggtt
gcagaaatacagacagtcaaggccattgtttatatcgaagaaatgaacagcatggcagat
gtcacctttccctctgtccctcaagttgcatctctattgatatatgatgatacttctaaa
gccaaagatagggccagtcccattgctggctatcctgtcatctgtatcacagcttgtaat
cctaagtacgaagactttgacaagactggttctatatgtgccagtgagaacatcaataat
actctgacacagtaccggtggcttgtgagtgcccccactggccccgatggtgtgaccagc
cccatgaaggagattgactttgacaccttcttcacttcctcgaagatgattacactcgac
tccatttactttcaagccggttctcgtgtccagtgtgcagctcgggctgtgaattcagat
gggaatgagggtcttgagcttatgagccctattgtcactataagcacatcagaaggtctt
tgtcagccccgtatatcaggagtagttggagcagagccattctctgccaaactgcgctac
actggcccagaagatcctgactatgccaacctcatcaaactgacagtcacaatgccacat
attgatggcatgctgcctgttatttctacaagagagctctccaactttgagctgacactt
agccacgatggaactagagttggaaaccataagtgctccaacctgttggattacacagaa
gtaaagacacaccatggttttttaactgacgctaccaagaatccagatgtgattggagaa
accattccctatcagtacagcccaacaattagaggcttcaacaccttgcgcttctaccgc
aacctgaacctggaagcctgcttgtgggagttcattagctactatgacatgtctgagctc
ctcacagattgtggaggcaccattggcacagatggacaggttctcaacctagtgcagtcc
tacgtcacgctgagggtccctttgtacgtctcttatgttttccactctccagtgggtgtc
gggggctggcagcatttcgacctgcagtcagagctccggctgacttttgtgtatgacact
gccatcctgtggaaggatgggatcggcagcccacctgaagcagagctccaaggttccctg
ttcccgaccagcatgcgcatcaacgaagaggggcgcttggttgtcaacttcaagactgaa
gcccggtttcatggtctgtttgttatgtcccatcctgcttcatctctaacttccatggtt
atgtcagtggaccacccaggcctcacttttagcctcagcctcatccgaagtgagccaacc
tacaacctgccagtccagcagtggagcttcctttcagacttcgcggttcgagactattcg
ggaatgtacacagtgaagctgatagcctgcaccactgccccacatcaggagtacagcctg
ccagtgatctgcaatcctagagagcccatcacttttgatctggacatccgattccagcag
gtcagtgacccagtggctgctgagttcagcttgaacacccaaatgttcctgctgtccaaa
aagacgctgtggctgtctgatggctcgatgggctttgggcaagaaagcgatgttactttc
tcagaaggggatgtcatatacggtcgagtgatggtggatccggtgcagaatttgggtgat
tccttctactgtagcatcgagaaggtcttcctgtgcacaggagctgatggatatgtaccc
aaatataatccatccaacactgaatatgggtgccttgctgattctccatcccttctgtac
aggtttaagattgtggacaaagctcagccagagacacaagccacaagctttggaaatgta
ctttttaatgcaaaacttgcaatagatgatcccgaagcaattccattagttaaacagcca
ggctctgatggattcaaagtagactcaactcctctgtttcaggtgtctttgggtagggag
tggtacgtccatacaatctacaccgtgcgttccaaggagaacgttaaccgtggcatcggt
aaaagaagcgtggagcaccagtaccactcactcctcagtgctgggagcccaggagcatcc
ccacagagaaggcagaaaaggggaactgagcaggcaccagaacttgcaagagacattgga
gtggagaacaaccgaggaacaaacatacagcacatagccctggatcgcaccagcaggaaa
caggtgcctcaaagggaggttgcactcaatggtgttctccccagggagctgaataaccaa
aatgcaggactcagcatagtcacaatcattggtggagctgctgccgttttccttgccatc
tgcttaattgcaattattgttttgctgctaaaatggaaacgaaattctgacaagaaggaa
agtacaaatgagtcaggcagcaatgaaccaatgatgctaccacataattacagcaatgac
agttcagaggtttga
DBGET
integrated database retrieval system
