Taeniopygia guttata (zebra finch): 100219592
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Entry
100219592 CDS
T01082
Symbol
TRPC1
Name
(RefSeq) short transient receptor potential channel 1
KO
K04964
transient receptor potential cation channel subfamily C member 1
Organism
tgu
Taeniopygia guttata (zebra finch)
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tgu04040
]
100219592 (TRPC1)
Ion channels [BR:
tgu04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
100219592 (TRPC1)
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Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
Ank_4
Dsc3_C
MTR4-like_stalk
Motif
Other DBs
NCBI-GeneID:
100219592
NCBI-ProteinID:
XP_012431008
Ensembl:
ENSTGUG00000008641
LinkDB
All DBs
Position
9:11183816..11201258
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AA seq
781 aa
AA seq
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MAALYQSADPSASASPNKLLALKDVRQVKEETTLDEKLFLLACDKGDYYMVKKLLEENSS
GEMNINCVDVLGRNAVTITIENENLDILQLLLDYGCQSSDALLVAIDSEVVGAVDILLNH
RPKRSSRPTIVKLMERIQNPEYSTTMDVAPVILAAHRNNYEILTMLLKQDISLPKPHAVG
CECTLCTAKNKKDSLRHSRFRLDIYRCLASPALIMLTEEDPILRAFELSADLKELSLVEV
EFRNDYEELAQQCKTFAKDLLAQARNSRELEVILNHTSSDEHVDKRGLLEERMNLSRLKL
AIKYNQKEFVAQSNCQQFLNTVWFGQMAGYRRKHTCKKILTVLMVGIFWPVLSLCYLLAP
KSRVGRIIHTPFMKFIIHGASYFTFLLLLNLYSLVYNENKKNTMGPALERIDYLLIIWLI
GMVWSDVKRLWYDGLEDFLEESRNQLSFVMNSLYLATFALKVVAHNKFHDYAERKDWDAF
HPTLVAEGLFAFANVLSYLRLFFMYTTSSILGPLQISMGQMLQDFGKFLGMFLLVLFSFT
IGLTQLYDKGFTVNEEKDCAGIFCEQQSNDTFHSFIGTCFALFWYIFSLAHVAIFVTRFS
YGEELQSFVGAVIVGTYNVVVVIVLTKLLVAMLHKSFQLIANHEDKEWKFARAKLWLSYF
DDKCTLPPPFNVIPSPKTICYLFNSLSKWICSHTSSGKVKRQNSLKEWRNLKQKRDENYQ
KVMCCLVHRYLTSMRQKMQSTDQATVENLNELRQDLSKFRNEMRDLLGFRTSKYAMFYPR
N
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atggccgccctgtaccagagcgcggacccgtccgcctcggcctcgcccaacaagctgctg
gcgctgaaggatgtgcggcaggtgaaggaggagactacgctggacgagaagcttttcctg
ctggcctgcgacaaaggtgactattacatggttaagaaactcttggaagaaaacagctca
ggtgaaatgaacataaattgtgtggatgtgcttggacgaaatgctgttactataaccatt
gaaaatgaaaacttggacatactacagctgcttttggattatggctgccagtcctcggat
gcacttttggtggctattgactcagaagtggtgggagctgttgacattctacttaatcac
cgaccaaaacgatcctccaggccaaccattgtgaaattaatggaacgtattcagaacccg
gagtactcaacaaccatggatgtggcaccagtaattttagctgctcatcgtaacaactat
gaaattctcaccatgctgttgaagcaagatatatcattacccaaacctcatgctgtgggg
tgtgagtgcacactgtgcactgccaagaacaaaaaagatagtctgcgacattccaggttt
cgtcttgacatttaccggtgtttggccagtcctgccttaataatgttgacagaggaggat
ccaatcctaagagcttttgaacttagtgcagacttgaaagaattaagccttgttgaggtt
gaattcagaaatgattacgaggagctcgctcaacagtgcaaaacctttgctaaagattta
cttgcacaagcacggaattcccgggagctggaagtgattctgaatcacacctccagtgat
gaacatgtagacaagcgaggattgttggaggagaggatgaacttaagccgcttaaaactt
gcaatcaaatataatcaaaaagagtttgttgcccagtccaactgccagcagttcctcaac
acggtgtggtttgggcagatggctggctatcggcgcaagcacacctgcaagaagatcctg
actgttctgatggttggcattttctggccagttctgtccctctgttacttgttagctcct
aaatctcgagtcggtcggataattcacactccttttatgaagtttattattcatggagct
tcatatttcacatttctgttattacttaatttgtactcccttgtctacaatgagaataag
aagaatacaatgggaccagcccttgagagaatagactatcttctgataatatggcttatc
ggaatggtgtggtcagatgttaagaggctctggtatgatggtttagaagattttttagaa
gaatcccgcaatcagcttagttttgtcatgaattccctgtatttggcaacttttgccctc
aaagtcgttgcccataacaagtttcatgattatgctgaaaggaaggactgggatgcattc
catcctaccctggtggcagaaggtctttttgcctttgccaatgttcttagttacctgcgt
ctcttcttcatgtacacaaccagctccattctgggaccactccagatctcaatggggcag
atgctacaagattttggaaaatttctgggcatgtttcttcttgtcttgttctcattcaca
attggattgacccaactttatgataaaggatttactgtaaatgaagaaaaggactgtgcg
ggcattttctgtgaacaacagagcaatgacacattccattcgtttattggtacatgtttt
gctctcttctggtacatattctccctggcacatgtggcaatctttgtgacacgttttagc
tacggtgaagaattacagtcttttgtgggtgctgttattgtggggacctacaacgtggtg
gttgtgatagtattaacgaaactccttgtggcaatgctccacaaaagttttcagctgata
gcaaatcatgaagataaggagtggaagtttgctcgtgccaagctttggcttagctacttc
gatgataaatgcacgctccctccaccttttaacgttataccctctcccaagacaatttgt
taccttttcaacagtctcagtaaatggatctgctctcatacatcaagtggcaaagtgaaa
cgtcagaacagcctcaaggaatggagaaatctgaagcagaagagagatgagaattaccaa
aaggtgatgtgttgcttagtgcaccgttacctgacttccatgaggcagaagatgcagagt
acagatcaggccactgtggaaaacctcaatgaactgcggcaggacttgtcaaaattccgg
aacgaaatgagagacctgcttggctttcgaacttccaaatatgctatgttttatccaaga
aactaa
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