Taeniopygia guttata (zebra finch): 100219639
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Entry
100219639 CDS
T01082
Symbol
PRPF4
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100219639 (PRPF4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tgu03041
]
100219639 (PRPF4)
Spliceosome [BR:
tgu03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
100219639 (PRPF4)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
PRP4
NBCH_WD40
WD40_like
Motif
Other DBs
NCBI-GeneID:
100219639
NCBI-ProteinID:
XP_030142191
Ensembl:
ENSTGUG00000002623
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Position
17:complement(1320464..1329113)
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AA seq
529 aa
AA seq
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MATARAPAARGAARPPEPPKAKPAEEAEAAPAKRAPIFYGSLEEKERERLAKGETGLLAK
EAMKAAMEAGNINISSGEVFDLEDHMSERQAEVLAEFERRKRARQINVSTDDCEVKACLR
ALGEPITLFGEGPAERRERLRNILSVVGTDALKKTRKDDDRSKKSKEEYQQTWYHEGPRS
LKTARLWLANYSLPRAAKRLEEARLLKEVPEATRTSQRQELHKSLRSLNNFCSQIGDDRP
LSYCHFSPNSKLLATACWSGLCKLWSVPDCNLVHTLRGHSTNVGAIVFHPKATVSLDKKD
VSLASCAADGSVKLWNLESDEPVADIEGHSMRVARVMWHPSGRFLGTTCYDHSWRLWDLE
AQEEILHQEGHSKGVYDIAFHTDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGI
NFSPNGYHVATGSGDNTCKVWDLRQRKCIYTIPAHQNLVTGVRFEPNHGNFLLTGAYDNT
AKIWTHPGWSPLKTLAGHEGKVMGLDISLDGQLIATCSYDRTFKLWTAE
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atggccaccgcgcgggcaccggcggcgcgcggtgcggcccggccccccgagccccccaag
gccaagcccgccgaggaggccgaggctgccccggccaagcgggcgcccatcttctacggg
agcctggaggagaaggagcgggagcgcctggccaagggcgagacggggctgctggccaag
gaggccatgaaggctgccatggaggccggcaacatcaacatcagcagcggggaggtgttt
gacctggaggaccacatgagcgagcggcaggccgaggtgctggcggagttcgagcgccgc
aagcgcgcccggcagatcaacgtgtccacggacgactgcgaggtcaaggcctgcctgcgg
gccctgggcgagcccatcacgctcttcggagagggtcctgcggagcgcagggagaggtta
aggaacatcctctcggtggtcggcacagacgcattaaaaaagacccggaaagatgatgac
aggtccaaaaagtccaaagaagagtatcagcaaacctggtaccacgagggccctcgcagt
ctgaaaacagccaggctgtggctggccaactactcactccccagggcagcgaagcggctg
gaggaggcccggctgctcaaggaggttcccgaggccaccaggacatcccagaggcaggag
ctgcacaaatccctgcggtccttgaataacttctgcagtcagattggggacgaccgcccg
ctgtcctactgccacttcagccccaactccaaactgctggccacagcctgctggagtggg
ctgtgcaagctctggtctgtgcctgactgcaacctggttcacaccttacgaggacacagc
accaacgtgggggcaatcgtgttccaccccaaggccacggtgtccctggacaagaaggat
gtgagcctagcctcgtgtgcagctgatggctctgtcaaactctggaacctggaaagtgat
gagccggtggcagacatcgagggacacagcatgcgagtggcccgtgtgatgtggcacccc
tcagggaggttcctgggcaccacctgctacgatcactcgtggcgcctgtgggacctggag
gcgcaggaggagatcctgcaccaggaggggcacagcaagggggtctacgacatcgccttc
cacaccgacggctccctcgctggcaccgggggtctggacgcctttggccgcgtgtgggac
ctgcgcacaggccgctgtattatgttcctggaagggcacctgaaggagatctacgggatc
aacttctccccaaacgggtaccacgtggccacgggcagtggggacaacacctgcaaggtg
tgggacctgcggcagaggaagtgcatctacaccatccctgcccaccagaacctggtcacc
ggcgtcaggtttgaacccaaccacgggaatttcctgctcacgggcgcctacgacaacacg
gccaagatctggacccaccctggctggtccccgctgaagacactggcggggcacgagggg
aaggtgatgggcctggacatctccctggatgggcagctcattgccacctgctcctacgac
agaactttcaagctctggacagccgagtag
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