Taeniopygia guttata (zebra finch): 100222021
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Entry
100222021 CDS
T01082
Symbol
HDAC4
Name
(RefSeq) histone deacetylase 4 isoform X1
KO
K11406
histone deacetylase 4/5 [EC:
3.5.1.98
]
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
100222021 (HDAC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tgu03036
]
100222021 (HDAC4)
Enzymes [BR:
tgu01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
100222021 (HDAC4)
Chromosome and associated proteins [BR:
tgu03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
100222021 (HDAC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
HDAC4_Gln
Motif
Other DBs
NCBI-GeneID:
100222021
NCBI-ProteinID:
XP_030132833
Ensembl:
ENSTGUG00000003197
LinkDB
All DBs
Position
7:complement(569773..747000)
Genome browser
AA seq
1089 aa
AA seq
DB search
MSSQSHPDGLSGRDQPVELLNPPRVNHMPSSVDVSTALPLQVAPSSVPMDLRLDHQFSMP
VTEPTLREQQLQQELLALKQKQQIQRQILIAEFQRQHEQLSRQHEAQLHEHIKQQQEMLA
MKHQQELLEHQRKLEQHRQEQELEKQHREQKLQQLKNKEKGKESAVASTEVKMKLQEFVL
NKKKALAHRNLNHCISSDPRFWYGKTQHSSLDQSSPPQSGVSGTYNHPVLGMYDSKDDFP
LRKTASEPNLKLRSRLKQKVAERRSSPLLRRKDGPVVTALKKRPLDVTGTADSACNSAPG
SGPSSPNNSSNNISTENGIAGSVTSIQAETSLAHRLVNREGSVTQLPLYTSPSLPNITLG
LPATGPSSAGQAQQDAERLAIPALQQRISLFPGTHLTPYLSTTALERDGGTAHNPLLQHM
VLLEQPTAQTPLVTDWYLSGLPLHAQPLVGGERVSPSIHKLRQHRPLGRTQSAPLPQNAQ
ALQQLVIQQQHQQFLEKHKQQFQQQQLHINKIISKPTEPARQHESHPEETEEELREHQAL
LEEPYGERATGQKEPPALASVVQVKQEPIESDEEEAEPQQELESGQRQAEQELLFRQQAL
LLEQQRIHQLRNYQASLEAAGMPVSFGGHRPLSRAQSSPASATFPMSVQEPPTKPRFTTG
LVYDTLMLKHQCTCGNTNSHPEHAGRIQSIWSRLQETGLRGKCECIRGRKATLEELQTVH
SEAHTLLYGTNPLNRQKLDSKKLLGSLTSMFVRLPCGGVGVDSDTIWNEVHSSGAARLAV
GCVIELVFKVATGELKNGFAVVRPPGHHAEESTPMGFCYFNSVAIAAKLLQQRLNVSKIL
IVDWDVHHGNGTQQAFYNDPNVLYISLHRYDDGNFFPGSGAPDEVGTGAGVGFNVNMAFT
GGLDPPMGDTEYLTAFRTVVMPIANEFAPDVVLVSSGFDAVEGHPTPLGGYNLSAKCFGY
LTKQLMGLAGGRVVLALEGGHDLTAICDASEACVSALLGNELDPLPEKVFQQRANANAVH
SMEKVIEIHSKYWHSLQRFASTVGYSLVEAQKCENEEAETVTAMASLSVGVKPAEKRPED
EPMEEEPPL
NT seq
3270 nt
NT seq
+upstream
nt +downstream
nt
atgagctcccaaagccatccagatgggctttctggcagagatcagccagttgagctgttg
aatccacctcgagtgaaccacatgcccagctctgttgacgtgagcacagccctgcccttg
caagtggcgccgagctcggtgcccatggacctgcggctggatcaccagttctccatgccg
gtgacggagccgacgctgcgggagcagcagctgcagcaggagctgctggccctcaagcag
aagcagcagattcagaggcagatcctgatcgcagagttccagcggcagcacgagcagctc
tctcggcagcatgaagcgcagctgcacgagcacatcaagcagcagcaggagatgctggcc
atgaagcatcagcaggagctgttggagcaccagaggaagctggagcagcaccgacaggag
caggagctggagaagcagcaccgagagcagaaactgcagcagctgaaaaacaaagagaaa
gggaaagagagtgcagtggcaagcacagaagtgaagatgaaattgcaggaatttgtgtta
aacaagaagaaggctctggcccaccggaatctcaaccactgcatatccagcgaccctcgc
ttctggtacgggaagacccagcacagctctctggaccagagctccccaccccaaagtggc
gtctccggcacctacaaccacccagtcctggggatgtacgattccaaagatgacttccca
ctcagaaaaacagcctctgagcccaacctgaagctgcgctccagactaaagcagaaggtg
gctgagaggaggagcagccccctcctgcgcaggaaggacgggcccgtggtgacggcactc
aagaagcgcccactggatgtcacagggacggcggactctgcatgcaacagcgctcctgga
tctggtcccagctctccgaacaacagctccaacaacatcagtactgagaacggaattgcg
ggatcagtcacgagtatccaagcagagaccagcctggctcacaggctcgtgaaccgcgag
ggctctgtgacacagctcccactctacacctcgccctcgctgcccaacatcacgctagga
ctgcctgccaccggcccctccagcgcaggacaagcgcagcaggacgcggagaggctcgca
attccagccttacagcagcggatctccttattccctggcactcacctcacaccctacctg
agcactacagcattggagagggatgggggaactgcacacaaccctctcctgcagcacatg
gtcctactggaacagccaactgcacaaacgcccctggtcacagactggtatctttcagga
ctgccgctgcacgcacagcccctggtgggtggagagagggtctccccttcgatccacaag
ctgcggcagcaccgcccgctcgggcgcacccagtctgctcccctgccccagaacgcccag
gccctccagcagctggtgatccagcagcagcaccagcagttcctggaaaaacacaaacag
cagttccagcagcagcagctgcacatcaacaagatcatctccaaacccacggagccggcg
cggcagcacgagagccaccccgaggagacggaggaggagctgcgggagcaccaggctctg
ctggaggagccctacggcgagcgggccacgggccagaaggagcccccggcgctggccagc
gtggtgcaggtcaagcaggagcccatcgagagcgacgaggaggaggcagagccgcagcag
gagctggagtccggccagaggcaggcggagcaggagctgctcttccgccagcaagccctg
ctcctggagcagcagcggattcaccagctgaggaactaccaggcgtcgctggaggcagct
ggcatgcccgtgtccttcgggggacaccggcccctgtcccgggcacagtcctcccccgcc
tcggccaccttccccatgtccgtgcaggagccacccactaagccaaggttcacaacaggg
cttgtgtacgacaccttgatgctgaagcaccagtgcacctgtggaaacaccaacagccac
cccgagcacgcgggcaggatccagagcatctggtccaggctccaggagacggggctgcgg
ggcaagtgtgagtgcatccgtggcagaaaggcgacgctggaggagctgcagacagttcac
tcggaagcccacacgctgctctacggcacaaaccctctgaacaggcagaaactggacagc
aagaagcttctaggttccctaacgtcaatgtttgtcaggctgccttgcggtggtgttggg
gtcgacagtgacaccatttggaacgaggtgcactcatcgggcgctgctcgcctggctgtg
ggctgtgtcatcgagctggtgttcaaagtggccacgggagaactgaagaatggatttgct
gttgttcggcccccgggtcaccacgcggaggagagcacacccatgggtttctgctatttt
aactctgtggcaattgcagccaagctgctccagcaaaggctcaacgtgagcaaaatcctc
attgtggactgggatgtccaccatgggaatggtactcagcaggccttctacaacgatccc
aatgtcctttatatctcactccatcgctacgatgatggcaacttcttcccaggcagtggc
gcaccggatgaggttggcacaggagcaggagttggtttcaatgttaacatggcatttact
ggtggtctggatccgcccatgggagacacagaatatttaactgccttcaggacagtagtg
atgcccattgccaacgagtttgccccagacgttgtgctggtgtcatctggtttcgatgct
gtggaagggcaccccacacccctgggaggatataatctgtcagcaaaatgcttcgggtac
ctgacgaagcagctgatgggcctggccgggggccgcgtggtgctggccctcgagggtggc
cacgacctcactgccatctgcgacgcctcggaggcctgtgtgtctgccctgctgggaaac
gagcttgaccctcttccagagaaagtgttccagcagagagcaaatgctaacgcagtgcat
tccatggagaaagtcatcgagatccacagcaagtactggcattccctccagcgttttgcc
tccacggtgggatattccctggtggaggcccagaagtgtgagaatgaagaggcggagaca
gtgacagccatggcatcgctgtcggtgggtgtgaagccagcggagaagagacctgaggat
gaacccatggaagaggagcctcccctgtag
DBGET
integrated database retrieval system
