Taeniopygia guttata (zebra finch): 100222223
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Entry
100222223 CDS
T01082
Symbol
RPGR
Name
(RefSeq) X-linked retinitis pigmentosa GTPase regulator isoform X1
KO
K19607
X-linked retinitis pigmentosa GTPase regulator
Organism
tgu
Taeniopygia guttata (zebra finch)
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
tgu03037
]
100222223 (RPGR)
Cilium and associated proteins [BR:
tgu03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
100222223 (RPGR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RCC1
RCC1_2
Motif
Other DBs
NCBI-GeneID:
100222223
NCBI-ProteinID:
XP_030138508
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All DBs
Position
1:complement(105862398..105899751)
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AA seq
1354 aa
AA seq
DB search
MAAPAAGTELPVPESGAVFTFGKSKFAEDVPSKFWFKNDKPVLISCGDEHTAIITEKGKL
YMFGSNDWGQLGLGSKNTVSKPTCVKALKPEKPKLAVCGRNHTLVYTEKGNVYAAGGNSE
GQLGLGDTEERTTFHLIRFFTNQHNIKQLSAGSYTSAAVTEDGQLFVWGDNSEGQIGLAS
EASVSVPCKVDIGKPVSFVSCGYYHSALITGDGELYTFGESVNGKLGLFPEQLKNNRVPQ
PVLGIMEKVNKVACGGEHTVVLTETDVYTFGLGQYGQLGHGTFVFESSVPKPVKRLKRHK
ICNISCGENHTAVIAENGLMFTFGDGRHGKLGFGEESFTNLFDPTLCYNFLKFTVLLVAC
GGCHMLVFAAPRPKGSEIPLEDLYEPRLTAAASQTRGDFVLANTLQLSAARMRRRERERS
PEQFARMAQTLPAMGKGFLKSSLPVTSNTSPFWFSATSQPKGEAGRDGDHDKENNHQKDK
PGEVSSEQDSDNENIDRNLGDTTDILNMTHAMKLNPGDWSLKLSPLQKQKKNNKNVKLKR
DGKGGLKNKDSSVTKEGSKLESGSLQKQSSLPESTGPDLEKSSAFVGKPVARKSIKKGKS
GHAQSDSTLKSGAQEITEDKSIIVKREKECVENPEFFREDATYNLPTENQILTEKINSSN
KKPKAVKSKQSLKIEVLPSAPRDQPQTDSLIVQEYSRVKKQGSEKPTDSQNKIKNGVEKS
DKCERINVTGEGSSAEQKELKKKHQFLKQVSVTSSSSSTEEITNDLQKYVLKEETYYEHR
VVQRARRTVTQLDFEKDSEIEEMQATNNEKESVEQTDLKSLNEEEMSSDAVPDEVRPLEI
KNEEESDQEQENESSEKGESEKEKLDETVNSEGEEEESEVKKGRDEVSVEKDEAGKDNEE
ENEKEESQTERDSGNEGAEETEEVSQQDGKEQRDEQGRLMEEVEMMSEGEKEDMEEKYEK
EEGTEKEKEQIKSEGRKESEEDGEDKEEGEEKEVEAEEEGEDEKEDEEEKERENEKDKAD
EEELGESLAEREEEVSEEEQDEEDANRKAKEVYVDGVEDGKGGEDEVEEEREDEKEEGIE
AEVEGDEGEEDEKEEEEGEDEEKGEDKEEGEGVEEDEGVGEEEESVGEDEGKEGVEEEEE
DEEEEEGVEEGGDEETGEEEEEVEEGEEGEQEEEEEDEGEGEEEEEKEEEVEEEEEEEWE
EEKGEEGEEEEEEGEEEKGEEGEEEEEEGEEEKGEEGEEEEEGEEGEGGEGDEEEGEEGD
EEKRDLGEEEEEDEGEEDEDEEEEEEEKAKDKRKNYSSKFPEKKSKPRKPEKAESSALPN
SSKLNMKSKRHLANGLHNPEQFWNNVLPHYLTLK
NT seq
4065 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgcccgccgcggggaccgagctgcccgtgcccgaatcaggtgctgttttcaca
ttcgggaaaagcaaatttgcagaagatgttcctagcaagttctggttcaaaaatgacaag
cctgtacttatatcatgtggagatgaacatacagctattattacagagaaaggtaaacta
tacatgttcggcagtaacgactggggccagttaggactaggatcaaagaacactgtcagc
aaaccaacctgtgttaaagctttaaaaccagaaaaaccaaaacttgctgtttgtggaaga
aaccacactttagtttacacagaaaaaggaaatgtctatgctgctggaggtaacagtgaa
ggccagttgggattaggtgacacagaggaaaggaccacatttcatttaatcagatttttc
accaaccagcacaatatcaagcaactatcagctggatcatacacctcagcagcagtaact
gaggatgggcagctctttgtgtggggtgataattcagaaggtcagattggcctggccagt
gaagcctctgtcagtgtcccctgcaaagtggatattggaaaacctgtttcctttgtatcc
tgtggatattatcattctgccttgataacaggagatggtgagctctatacttttggagaa
tctgtgaatgggaaactgggattattccctgaacagctgaagaacaatagagtcccacag
cctgtactgggaattatggaaaaggttaataaggttgcttgtggtggagaacacaccgtg
gtgctgacagagacagatgtttatacttttggacttggacaatatgggcagctgggacat
ggaacttttgtgtttgaaagttcagtaccgaagcctgtgaaacgcctgaagaggcataaa
atatgtaacatttcatgtggggaaaatcacactgctgtgatagcagagaatggcctcatg
tttacttttggagatggacgacatggcaagttaggatttggagaagagagttttacaaat
ctgtttgatcccactctgtgttacaatttcttgaagttcacagtccttttggttgcttgt
gggggttgtcacatgctggtttttgctgctccaagacctaaaggatctgaaatacccttg
gaagatttatatgagcctcgtttgactgctgccgcctctcaaacaagaggggactttgtg
ctggcaaacactttgcagttatcagcagcacgaatgcgacgtcgagagagggaaaggtca
ccagagcagtttgctcgaatggcacaaactctgcctgcaatggggaaaggcttcctaaaa
tcttcactgcctgtgacaagcaacaccagcccattctggttttctgcaacaagtcagcct
aaaggtgaagctgggagggatggagaccatgataaagaaaataatcatcaaaaagataaa
cctggtgaagtctcttcagaacaagattcggataatgaaaatattgacagaaaccttgga
gatacaactgacatcctaaatatgacacatgcaatgaagttgaatcctggtgactggtcc
ttaaaattatcaccactccaaaaacagaagaagaacaataaaaatgtgaaactgaaaaga
gatggtaagggtgggctgaaaaacaaggattcctctgtcactaaggagggctcaaaatta
gagtctggctctttacaaaagcagtcttcacttccagagtcaactggaccagatttagaa
aagagtagtgcctttgtagggaagcctgtggccagaaaaagtataaagaaaggtaaatct
gggcatgcacaaagtgatagtactttgaaaagtggtgctcaagaaattaccgaggacaaa
agcataatagtgaaaagggaaaaagagtgtgtggaaaatcctgaatttttcagagaggat
gcaacatataatcttcccactgaaaatcaaattctgactgaaaaaataaattcttccaat
aaaaagccaaaagctgttaaatctaagcaatcgcttaaaatagaggtacttccttctgct
cccagggatcagccccagactgattcattaattgtacaagaatacagtcgtgttaaaaag
caagggagtgaaaaaccaacagatagtcaaaacaaaataaagaatggtgttgaaaaatct
gacaagtgtgaaagaataaatgtcacaggagaaggaagtagtgcagaacagaaggagctt
aaaaaaaagcatcagtttttgaaacaagtatctgtaacttcatcatcatcttcaactgag
gaaattactaatgatctccaaaaatatgtacttaaggaagagacctactatgaacacaga
gttgtccagagggcaaggaggacagtgacacagctggactttgaaaaagacagtgagatt
gaagagatgcaagctacaaacaatgagaaagaaagtgtagaacagactgatttaaaaagc
ctgaatgaggaagaaatgagctctgatgctgtacctgatgaagtcaggccattagaaatt
aagaatgaggaggaatctgatcaggagcaggagaatgaaagcagtgaaaagggtgaaagt
gaaaaagaaaaactagatgaaacagttaacagtgaaggggaggaagaagagagtgaggtt
aaaaaaggcagagatgaagtttcagtagaaaaagatgaagcgggaaaagataatgaggaa
gaaaatgaaaaagaagaatcacagactgaaagagacagtgggaatgagggtgcagaggag
actgaggaggtcagccagcaagatggcaaagagcaaagagatgagcaaggcagattgatg
gaggaagtagaaatgatgagtgagggagaaaaggaggatatggaggagaagtatgagaaa
gaggaaggcactgaaaaagaaaaagagcaaattaaaagtgagggaagaaaagagagtgag
gaagatggggaagataaagaggaaggggaagaaaaagaggtagaggcagaagaggaagga
gaagatgaaaaggaagatgaagaggaaaaagaaagggaaaatgaaaaagacaaagcggat
gaagaggagttgggagaatcattggcagagagggaagaagaggtatctgaagaagagcag
gatgaggaagatgcaaatagaaaagctaaggaagtgtatgtggatggagtggaagacgga
aaaggtggggaggatgaagtggaagaggaaagagaagatgagaaagaggaaggaatagag
gcagaagtagaaggggatgagggggaagaagatgaaaaggaagaagaggagggggaagat
gaagagaaaggggaagataaagaagagggagaaggagtggaagaagatgagggagtagga
gaggaagaagagagtgttggagaagatgagggaaaagagggagtggaagaagaagaggaa
gatgaggaggaagaagaaggagtggaggaagggggagatgaggaaacaggagaggaagaa
gaagaggtagaggagggagaagagggagaacaggaagaagaagaagaagatgaaggagaa
ggggaggaggaagaggaaaaagaggaagaggttgaagaggaagaagaagaagagtgggag
gaagaaaaaggggaagagggtgaggaggaagaagaagagggggaggaagaaaaaggagaa
gagggtgaggaggaagaagaagagggggaagaagaaaagggagaagagggagaggaggaa
gaagaaggggaagagggagaggggggagaaggtgacgaggaagagggagaagaaggagat
gaggagaaaagggatttaggagaagaggaagaagaggatgagggagaagaagatgaggat
gaggaggaagaagaagaggaaaaagcaaaagataaaaggaaaaactatagtagtaaattt
ccagaaaagaaaagcaaacccaggaagccagaaaaggcagaaagtagtgctttaccaaac
agctctaaactaaacatgaaatccaaacgtcatctagcaaatggtttacataatccagaa
caattttggaacaatgtgctacctcattatttaacactaaagtag
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