Taeniopygia guttata (zebra finch): 100222477
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Entry
100222477 CDS
T01082
Symbol
APAF1
Name
(RefSeq) apoptotic protease-activating factor 1 isoform X1
KO
K02084
apoptotic protease-activating factor
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu04115
p53 signaling pathway
tgu04210
Apoptosis
tgu05164
Influenza A
tgu05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
100222477 (APAF1)
04115 p53 signaling pathway
100222477 (APAF1)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
100222477 (APAF1)
05168 Herpes simplex virus 1 infection
100222477 (APAF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
NB-ARC
APAF1_C
APAF-1-like_WHD
ANAPC4_WD40
NBCH_WD40
CARD
eIF2A
CARD_2
WD40_like
Ge1_WD40
Nup160
WDR54
AAA_16
DUF2415
RAB3GAP2_N
AAA_22
Motif
Other DBs
NCBI-GeneID:
100222477
NCBI-ProteinID:
XP_002190128
Ensembl:
ENSTGUG00000008761
LinkDB
All DBs
Position
1A:44482873..44513875
Genome browser
AA seq
1249 aa
AA seq
DB search
MDVKSRNYLLMNRQALENDIKTSYIMDRMISDEVLTLQEEERVKQQNTQKERAAMLINII
LTKDNNSYRSFYNALLHEGYRDLAALLQDGIPAVSSGNRKSSMDGMTSYVKTILCEGGVP
QRPVVFVTRPKLVDAIKKKLYCLGSDPGWVTVYGMAGCGKTVLTAEALRDPQLLEDYFPG
GVHWISVGKQDKAGLLIKLQNLCSRLEHDSTLSQRPPLNIEEAKDRLRLLMLRKYPRSLL
VLDDIWDSWVLKAFDNQCQVLITSRDRSVTDAVAGNKYEVHVESGLAHEKGLEILSLFVN
MKISELPEQANSLVRECKGSPLVISLIGALLRDFPSRWEYYLRQLQNKQFKRIRKSSSYD
YEALDEAMSISVEQLDDNYKDYYKDLSILPKDVKVPTKVLCILWDMETEEVEDILQEFVN
KSLLFCDRNGKSFHYYLHDLQLDFLTEKNRNQLQELHKNIVNQYKKYYKLNTPVLSQEDC
MYWYNFLAYHMAGAKMQQELRDLMFSLDWIKAKTELVGPAHLIHEYVEYSSVLDQKDSTV
RENFQEFLSLNGHLLGRQPFPDIIQLGLCQPETSEVYQQAKLHAQRETGTFYLEWINKKS
LKNLYRLVVRPHRDAVYHACFSKDKQRIASCGADKTLQVFKAESGERLLEINAHDDEILC
CTFSADGEFVATCSSDKKVKVWNSRTGQCRCVYEEHSEQVNCCQFNNKSGQYLLATCSND
TFIKIWDLNKKYCRNTMIGHENSVNHCRFSPNDEYVASCSTDGTVKLWESRSGNELKSIE
IKDFFKNADEKPDDVEVLVKCCSWSRNGDKILVVAKNKLLLFDINTCGLLTQVIVSHHST
IQYCDFCPGDELVAVALSHCSVELWNIKSLSKVAYCRGHMSWVHCVTFSPDGSLFLTSSD
DQTIRIWETKKVCKSSDAVLKSELDVVFHNGEVMILAIYNQKNLQLINGNTDNVIMQTVA
QESPISCCCLSEDLKFAAFGQESGTIKVLQLSDGKVLKSWEAYRTSVQHCRFTPDCQTLI
SSAHDPVIQVWNWQLSECVFLRGHNEAIKDFRLLENSKILSWSFDGTVKVWNITTGNPER
DFACHRGAVLSCAVSPDGSKFSSASADKTAKIWSFESSSVLHELKDHEACVRCCTFSPNN
KLLATGDDKGEIRIWDVLTGTLLHFCSPVTVDEGEPTHGGWVTDLSFSPDSKMLVSSGGY
LKWWNVTTGESLQTFYTNGTNLKSIHVSPNFKVYVTVDNLGILYVLQKF
NT seq
3750 nt
NT seq
+upstream
nt +downstream
nt
atggatgtcaagagtagaaactatttgcttatgaatcgtcaagcactggaaaatgacatc
aagacttcttatattatggatcgtatgatttctgatgaagtattgacattacaggaggag
gagagagtgaagcaacagaatacacagaaggagcgagcagctatgctaataaacattatt
cttacaaaagataataattcatatagatcattttataatgcactgctccatgaagggtac
agagatcttgctgcgcttcttcaggatggcatccctgccgtctcgtctggtaacagaaag
agctcaatggatggaatgacttcctacgtgaagaccattctctgcgaaggaggcgtacca
cagagaccagttgtgtttgtcactcgaccaaaactggtagatgctattaaaaagaaactg
tactgcttgggaagtgatccaggttgggtcacagtttatggaatggcaggctgtgggaag
actgttttaacagcagaagctttaagggatcctcagctcttggaagattactttccagga
ggagttcactggatctctgttgggaaacaggacaaagcagggctgctcataaaacttcag
aatctctgtagtagattggaacatgactccactctttcacaaaggccaccacttaacatt
gaggaggcaaaagatcgtcttcgtttgctgatgttacgcaaataccccaggtctcttttg
gtcctggatgacatctgggattcctgggtgttaaaagcatttgataatcaatgtcaggta
ctcatcacgagcagagacagaagtgtaacagatgctgtggctggcaataaatatgaggtt
catgtggaaagtggactagcacatgagaaaggactggagattttatccctgtttgtgaac
atgaaaatatcagaacttccagaacaagctaactctcttgtaagagaatgcaaaggttct
cctctcgtgatatccttgataggtgcattactacgagacttcccaagccgctgggagtac
tatctcaggcagctgcagaataagcagtttaaaagaataagaaaatcatcttcttatgat
tacgaagcccttgatgaagcaatgtccataagtgttgagcagttggatgacaattacaaa
gactactataaagacctctctatcctcccaaaagatgttaaagtacctactaaggttctc
tgtattctttgggatatggaaactgaagaagttgaagatatactacaggaatttgttaac
aaatcactgttgttctgtgatcgtaatgggaagtcattccattattatttacatgatctt
cagcttgactttctcacagagaagaaccgcaaccagctccaggagctacataaaaacata
gtaaatcagtacaagaaatactacaagcttaatacacctgttttgtctcaagaggattgc
atgtactggtataattttctagcatatcacatggcaggtgccaaaatgcagcaggagctc
cgtgaccttatgttttctttagattggattaaagctaaaacagaattggtggggcctgct
catctgattcatgaatatgtagaatatagttcagtcctggatcaaaaggatagcacagtg
cgtgagaatttccaggagtttctgtccttaaatgggcaccttcttggacggcagccgttt
cctgacatcattcagctgggtctttgccagcccgagacatcagaggtgtatcaacaggcc
aagctacacgctcaaagggaaacaggaacattttatttggagtggataaataaaaaatcc
ttgaagaatctctaccgtctggttgtccgtccacatagagatgcagtttaccatgcctgc
ttttctaaggataaacaacgaatagcatcatgtggagctgataaaactcttcaggtgttt
aaagcagaaagtggagagagactcctggagataaatgcccacgatgatgaaatactctgt
tgcactttttctgcagatggtgaatttgtagcaacttgttcaagtgataaaaaagtcaag
gtctggaattcaagaacaggccagtgtaggtgtgtgtatgaagaacactccgagcaggtc
aattgttgccagttcaataacaaaagtggtcagtaccttctggccacctgctcaaatgac
actttcatcaaaatttgggatttgaataaaaaatactgcagaaatacaatgataggtcat
gaaaattctgtcaatcactgcagattttcaccaaatgatgaatatgttgctagctgctca
acagatggaacagtaaagctttgggaatcacgctcaggaaatgaactgaaaagtattgag
ataaaagatttctttaaaaatgcagatgaaaaaccagatgatgtggaggttttagtaaaa
tgttgctcctggtccagaaatggtgacaagattttggtggtagccaaaaataaacttttg
ctttttgacatcaacacctgtggtttgttaactcaagtcattgtcagtcatcacagcaca
atccaatactgtgacttctgtcctggggatgagttagtagcagttgctttgtctcactgc
tctgttgagttatggaatattaagtctttatcaaaagtggcatattgcagaggacacatg
agctgggttcactgtgtgacattttcaccagatggatctttatttctgacttcatctgat
gaccagacaatacgtatctgggaaacaaagaaggtgtgcaagtcttctgatgctgtgctg
aagagtgaactagatgttgtgtttcacaatggtgaagtgatgattttagccatctacaat
cagaagaatttacaacttatcaatggaaatacagacaatgttattatgcagacagtagcc
caagaatcccccatttcctgctgttgcttaagtgaagatcttaaatttgcagcttttgga
caggagagtggaacaataaaggtactacagttgtcagatgggaaggttctgaagtcctgg
gaggcctacaggacatctgtgcagcactgtcgatttacacctgactgtcagactctcatc
tcaagtgctcatgatccagttatacaggtatggaattggcagttgagtgaatgtgtgttt
ctaagagggcacaatgaagcaatcaaggattttagacttctggaaaattcaaaaattctc
tcttggtcatttgatggaactgttaaggtttggaatatcactactggaaacccagaaaga
gattttgcttgtcatagaggtgcagttctttcctgtgctgtttcacctgatggtagtaaa
ttttcatctgcttctgctgacaaaactgcaaagatatggagttttgagagttcatctgtt
cttcatgaactgaaagaccatgaagcctgtgtgcggtgctgtactttctctcctaataac
aaactgttggccactggagatgacaaaggagaaataaggatttgggacgttttaacaggt
acattgcttcatttctgctcccccgttactgtagatgaaggagaaccaacacatgggggt
tgggtaacagacctctccttttctcctgacagtaaaatgcttgtgtcatctgggggctat
cttaagtggtggaatgtaactactggagaatccttacaaaccttctacacaaatggaaca
aatctcaagtcaatacatgtgtcccctaatttcaaagtatatgtgactgttgataatctt
ggcattctctatgtattacagaagttctga
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